RNA–Protein interactions for RNA: ENST00000429896.6

PTCH1-207, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 6,563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-207ENST00000429896 ZFP92A6NM28 416 aa11.43□□□□□ -0.58
PTCH1-207ENST00000429896 DEGS1O15121 323 aa11.43□□□□□ -0.58
PTCH1-207ENST00000429896 CTLA4P16410 223 aa11.43□□□□□ -0.58
PTCH1-207ENST00000429896 LIPAP38571 399 aa11.43□□□□□ -0.58
PTCH1-207ENST00000429896 URGCP-MRPS24S4R325 110 aa11.43□□□□□ -0.58
PTCH1-207ENST00000429896 CRYZL1O95825 349 aa11.43□□□□□ -0.58
PTCH1-207ENST00000429896 KLF3P57682 345 aaPredicted RBP11.43□□□□□ -0.58
PTCH1-207ENST00000429896 BTN1A1Q13410 526 aa11.43□□□□□ -0.58
PTCH1-207ENST00000429896 EXOSC2Q13868 293 aaKnown RBP11.43□□□□□ -0.58
PTCH1-207ENST00000429896 NECAP1Q8NC96 275 aa11.43□□□□□ -0.58
PTCH1-207ENST00000429896 DLL3Q9NYJ7 618 aa11.43□□□□□ -0.58
PTCH1-207ENST00000429896 FZR1Q9UM11 496 aa11.43□□□□□ -0.58
PTCH1-207ENST00000429896 ZNF732B4DXR9 585 aa11.42□□□□□ -0.58
PTCH1-207ENST00000429896 SRMP19623 302 aa11.42□□□□□ -0.58
PTCH1-207ENST00000429896 OR51A2Q8NGJ7 313 aa11.42□□□□□ -0.58
PTCH1-207ENST00000429896 UHRF2Q96PU4 802 aa11.42□□□□□ -0.58
PTCH1-207ENST00000429896 DUSP21Q9H596 190 aa11.42□□□□□ -0.58
PTCH1-207ENST00000429896 LIN7BQ9HAP6 207 aa11.42□□□□□ -0.58
PTCH1-207ENST00000429896 SLC52A3Q9NQ40 469 aa11.42□□□□□ -0.58
PTCH1-207ENST00000429896 GHRLQ9UBU3 117 aa11.42□□□□□ -0.58
PTCH1-207ENST00000429896 SLC22A13Q9Y226 551 aa11.42□□□□□ -0.58
PTCH1-207ENST00000429896 SIRPB1O00241 398 aa11.42□□□□□ -0.58
PTCH1-207ENST00000429896 SOX15O60248 233 aa11.42□□□□□ -0.58
PTCH1-207ENST00000429896 PPP1CBP62140 327 aa11.42□□□□□ -0.58
PTCH1-207ENST00000429896 ZP4Q12836 540 aa11.42□□□□□ -0.58
PTCH1-207ENST00000429896 LY6DQ14210 128 aa11.42□□□□□ -0.58
PTCH1-207ENST00000429896 OR6M1Q8NGM8 313 aa11.42□□□□□ -0.58
PTCH1-207ENST00000429896 C4orf45Q96LM5 186 aa11.42□□□□□ -0.58
PTCH1-207ENST00000429896 DOK1Q99704 481 aa11.42□□□□□ -0.58
PTCH1-207ENST00000429896 FGF20Q9NP95 211 aaPredicted RBP11.42□□□□□ -0.58
PTCH1-207ENST00000429896 TMEFF2Q9UIK5 374 aaPredicted RBP11.42□□□□□ -0.58
PTCH1-207ENST00000429896 DOCK4Q8N1I0 1966 aa11.42□□□□□ -0.58
PTCH1-207ENST00000429896 DSPPQ9NZW4 1301 aa11.42□□□□□ -0.58
PTCH1-207ENST00000429896 HPNP05981 417 aa11.42□□□□□ -0.58
PTCH1-207ENST00000429896 PATE4P0C8F1 98 aa11.42□□□□□ -0.58
PTCH1-207ENST00000429896 ZNF92Q03936 586 aa11.42□□□□□ -0.58
PTCH1-207ENST00000429896 HIKESHIQ53FT3 197 aa11.42□□□□□ -0.58
PTCH1-207ENST00000429896 INO80CQ6PI98 192 aaPredicted RBP11.42□□□□□ -0.58
PTCH1-207ENST00000429896 SLC35G3Q8N808 338 aa11.42□□□□□ -0.58
PTCH1-207ENST00000429896 OR2Z1Q8NG97 314 aa11.42□□□□□ -0.58
PTCH1-207ENST00000429896 OR51F2Q8NH61 342 aa11.42□□□□□ -0.58
PTCH1-207ENST00000429896 CENPOQ9BU64 300 aa11.42□□□□□ -0.58
PTCH1-207ENST00000429896 POFUT1Q9H488 388 aa11.42□□□□□ -0.58
PTCH1-207ENST00000429896 KCNE5Q9UJ90 142 aa11.42□□□□□ -0.58
PTCH1-207ENST00000429896 EPHA2P29317 976 aa11.42□□□□□ -0.58
PTCH1-207ENST00000429896 KCNIP4Q6PIL6 250 aa11.42□□□□□ -0.58
PTCH1-207ENST00000429896 TVP23CQ96ET8 276 aa11.42□□□□□ -0.58
PTCH1-207ENST00000429896 ZNF486Q96H40 463 aaPredicted RBP11.42□□□□□ -0.58
PTCH1-207ENST00000429896 SFXN3Q9BWM7 321 aa11.42□□□□□ -0.58
PTCH1-207ENST00000429896 SHARPINQ9H0F6 387 aa11.42□□□□□ -0.58
PTCH1-207ENST00000429896 RNF150Q9ULK6 438 aa11.42□□□□□ -0.58
PTCH1-207ENST00000429896 HLA-DOBP13765 273 aa11.42□□□□□ -0.58
PTCH1-207ENST00000429896 CPT2P23786 658 aa11.42□□□□□ -0.58
PTCH1-207ENST00000429896 P2RY6Q15077 328 aa11.42□□□□□ -0.58
PTCH1-207ENST00000429896 OR51A4Q8NGJ6 313 aa11.42□□□□□ -0.58
PTCH1-207ENST00000429896 UPRTQ96BW1 309 aa11.42□□□□□ -0.58
PTCH1-207ENST00000429896 TECTBQ96PL2 329 aa11.42□□□□□ -0.58
PTCH1-207ENST00000429896 ZNF385AQ96PM9 386 aaKnown RBP11.42□□□□□ -0.58
PTCH1-207ENST00000429896 TIMP4Q99727 224 aa11.42□□□□□ -0.58
PTCH1-207ENST00000429896 CDCA4Q9BXL8 241 aa11.42□□□□□ -0.58
PTCH1-207ENST00000429896 RAB1BQ9H0U4 201 aa11.42□□□□□ -0.58
PTCH1-207ENST00000429896 SLC39A9Q9NUM3 307 aa11.42□□□□□ -0.58
PTCH1-207ENST00000429896 FBXO7Q9Y3I1 522 aa11.42□□□□□ -0.58
PTCH1-207ENST00000429896 TRDV1A0A1B0GX56 115 aa11.41□□□□□ -0.58
PTCH1-207ENST00000429896 TMEM82A0PJX8 343 aa11.41□□□□□ -0.58
PTCH1-207ENST00000429896 OR13C7P0DN81 318 aa11.41□□□□□ -0.58
PTCH1-207ENST00000429896 CCL2P13500 99 aa11.41□□□□□ -0.58
PTCH1-207ENST00000429896 DDOSTP39656 456 aa11.41□□□□□ -0.58
PTCH1-207ENST00000429896 TAS2R46P59540 309 aa11.41□□□□□ -0.58
PTCH1-207ENST00000429896 PDZD11Q5EBL8 140 aa11.41□□□□□ -0.58
PTCH1-207ENST00000429896 GLYATL3Q5SZD4 288 aa11.41□□□□□ -0.58
PTCH1-207ENST00000429896 TMEM81Q6P7N7 255 aa11.41□□□□□ -0.58
PTCH1-207ENST00000429896 LSRQ86X29 649 aaPredicted RBP11.41□□□□□ -0.58
PTCH1-207ENST00000429896 BARHL1Q9BZE3 327 aa11.41□□□□□ -0.58
PTCH1-207ENST00000429896 ZNF391Q9UJN7 358 aa11.41□□□□□ -0.58
PTCH1-207ENST00000429896 PIK3IP1Q96FE7 263 aa11.41□□□□□ -0.58
PTCH1-207ENST00000429896 SPACA5Q96QH8 159 aa11.41□□□□□ -0.58
PTCH1-207ENST00000429896 TXN2Q99757 166 aa11.41□□□□□ -0.58
PTCH1-207ENST00000429896 ADAT1Q9BUB4 502 aaKnown RBP11.41□□□□□ -0.58
PTCH1-207ENST00000429896 RAF1P04049 648 aa11.41□□□□□ -0.58
PTCH1-207ENST00000429896 ZNF728P0DKX0 622 aa11.41□□□□□ -0.58
PTCH1-207ENST00000429896 PLA1AQ53H76 456 aa11.41□□□□□ -0.58
PTCH1-207ENST00000429896 ZNF705AQ6ZN79 300 aaPredicted RBP11.41□□□□□ -0.58
PTCH1-207ENST00000429896 NLRC3Q7RTR2 1065 aa11.41□□□□□ -0.58
PTCH1-207ENST00000429896 OR10X1Q8NGY0 326 aa11.41□□□□□ -0.58
PTCH1-207ENST00000429896 RAB40AQ8WXH6 277 aa11.41□□□□□ -0.58
PTCH1-207ENST00000429896 TMEM38BQ9NVV0 291 aa11.41□□□□□ -0.58
PTCH1-207ENST00000429896 NPAP1Q9NZP6 1156 aa11.41□□□□□ -0.58
PTCH1-207ENST00000429896 KIF25Q9UIL4 384 aa11.41□□□□□ -0.58
PTCH1-207ENST00000429896 SSUH2Q9Y2M2 353 aa11.41□□□□□ -0.58
PTCH1-207ENST00000429896 C17orf112F2Z3M2 114 aa11.41□□□□□ -0.58
PTCH1-207ENST00000429896 AQP8O94778 261 aa11.41□□□□□ -0.58
PTCH1-207ENST00000429896 RFPL3SP0C7P2 107 aa11.41□□□□□ -0.58
PTCH1-207ENST00000429896 TAS2R30P59541 319 aa11.41□□□□□ -0.58
PTCH1-207ENST00000429896 LSM6P62312 80 aaKnown RBP11.41□□□□□ -0.58
PTCH1-207ENST00000429896 MRPS10P82664 201 aaKnown RBP11.41□□□□□ -0.58
PTCH1-207ENST00000429896 MFGE8Q08431 387 aaPredicted RBP11.41□□□□□ -0.58
PTCH1-207ENST00000429896 CATR1Q13166 79 aa11.41□□□□□ -0.58
PTCH1-207ENST00000429896 OPCMLQ14982 345 aa11.41□□□□□ -0.58
PTCH1-207ENST00000429896 TATDN3Q17R31 274 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms