RNA–Protein interactions for RNA: ENST00000429102.6

CDH3-202, Transcript of cadherin 3, humanhuman

TSL 1 (best) BASIC

Gene CDH3, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-202ENST00000429102 THRSPQ92748 146 aa11.01□□□□□ -0.65
CDH3-202ENST00000429102 DDIT4LQ96D03 193 aa11.01□□□□□ -0.65
CDH3-202ENST00000429102 GNRHR2Q96P88 292 aa11.01□□□□□ -0.65
CDH3-202ENST00000429102 RAB33BQ9H082 229 aa11.01□□□□□ -0.65
CDH3-202ENST00000429102 IFT22Q9H7X7 185 aa11.01□□□□□ -0.65
CDH3-202ENST00000429102 CYTL1Q9NRR1 136 aa11.01□□□□□ -0.65
CDH3-202ENST00000429102 LDLRAD4O15165 306 aa11□□□□□ -0.65
CDH3-202ENST00000429102 P2RY4P51582 365 aa11□□□□□ -0.65
CDH3-202ENST00000429102 SUPT4H1P63272 117 aaKnown RBP11□□□□□ -0.65
CDH3-202ENST00000429102 C1orf100Q5SVJ3 147 aa11□□□□□ -0.65
CDH3-202ENST00000429102 NCMAPQ5T1S8 102 aa11□□□□□ -0.65
CDH3-202ENST00000429102 EIF4E3Q8N5X7 224 aaKnown RBP11□□□□□ -0.65
CDH3-202ENST00000429102 KCNG3Q8TAE7 436 aa11□□□□□ -0.65
CDH3-202ENST00000429102 ZNF285Q96NJ3 590 aa11□□□□□ -0.65
CDH3-202ENST00000429102 KCNK17Q96T54 332 aa11□□□□□ -0.65
CDH3-202ENST00000429102 LPAR3Q9UBY5 353 aa11□□□□□ -0.65
CDH3-202ENST00000429102 NDRG3Q9UGV2 375 aa11□□□□□ -0.65
CDH3-202ENST00000429102 PIGLQ9Y2B2 252 aa11□□□□□ -0.65
CDH3-202ENST00000429102 THADAQ6YHU6 1953 aa11□□□□□ -0.65
CDH3-202ENST00000429102 A0A1W2PPE3 182 aa11□□□□□ -0.65
CDH3-202ENST00000429102 A6NIZ1 184 aa11□□□□□ -0.65
CDH3-202ENST00000429102 DHRS7CA6NNS2 312 aa11□□□□□ -0.65
CDH3-202ENST00000429102 SFT2D2O95562 160 aa11□□□□□ -0.65
CDH3-202ENST00000429102 MEOX2P50222 304 aa11□□□□□ -0.65
CDH3-202ENST00000429102 TMEM33P57088 247 aa11□□□□□ -0.65
CDH3-202ENST00000429102 RAP1BP61224 184 aa11□□□□□ -0.65
CDH3-202ENST00000429102 RAP1AP62834 184 aa11□□□□□ -0.65
CDH3-202ENST00000429102 ZNF345Q14585 488 aa11□□□□□ -0.65
CDH3-202ENST00000429102 DHRS11Q6UWP2 260 aa11□□□□□ -0.65
CDH3-202ENST00000429102 PLXDC2Q6UX71 529 aa11□□□□□ -0.65
CDH3-202ENST00000429102 HOGA1Q86XE5 327 aa11□□□□□ -0.65
CDH3-202ENST00000429102 SULF2Q8IWU5 870 aa11□□□□□ -0.65
CDH3-202ENST00000429102 SFT2D1Q8WV19 159 aa11□□□□□ -0.65
CDH3-202ENST00000429102 ERGIC1Q969X5 290 aa11□□□□□ -0.65
CDH3-202ENST00000429102 OR6C1Q96RD1 312 aa11□□□□□ -0.65
CDH3-202ENST00000429102 MAGT1Q9H0U3 335 aa11□□□□□ -0.65
CDH3-202ENST00000429102 A0A1W2PPH5 198 aa10.99□□□□□ -0.65
CDH3-202ENST00000429102 MEX3AA1L020 520 aaKnown RBP10.99□□□□□ -0.65
CDH3-202ENST00000429102 LINC00587B1AMM8 73 aa10.99□□□□□ -0.65
CDH3-202ENST00000429102 NPIPB7O75200 414 aa10.99□□□□□ -0.65
CDH3-202ENST00000429102 LY86O95711 162 aa10.99□□□□□ -0.65
CDH3-202ENST00000429102 CSTBP04080 98 aaKnown RBP10.99□□□□□ -0.65
CDH3-202ENST00000429102 ABCA11PQ4W5N1 156 aa10.99□□□□□ -0.65
CDH3-202ENST00000429102 DTX1Q86Y01 620 aa10.99□□□□□ -0.65
CDH3-202ENST00000429102 ZDHHC22Q8N966 263 aa10.99□□□□□ -0.65
CDH3-202ENST00000429102 FNDC9Q8TBE3 224 aa10.99□□□□□ -0.65
CDH3-202ENST00000429102 UQCC2Q9BRT2 126 aa10.99□□□□□ -0.65
CDH3-202ENST00000429102 RTBDNQ9BSG5 229 aaPredicted RBP10.99□□□□□ -0.65
CDH3-202ENST00000429102 GPR132Q9UNW8 380 aa10.99□□□□□ -0.65
CDH3-202ENST00000429102 IGKV1-9A0A0C4DH69 117 aa10.99□□□□□ -0.65
CDH3-202ENST00000429102 GPR37O15354 613 aa10.99□□□□□ -0.65
CDH3-202ENST00000429102 IGHG1P01857 330 aa10.99□□□□□ -0.65
CDH3-202ENST00000429102 CAMLGP49069 296 aa10.99□□□□□ -0.65
CDH3-202ENST00000429102 MMP16P51512 607 aa10.99□□□□□ -0.65
CDH3-202ENST00000429102 SCAND1P57086 179 aa10.99□□□□□ -0.65
CDH3-202ENST00000429102 C17orf67Q0P5P2 114 aa10.99□□□□□ -0.65
CDH3-202ENST00000429102 MIDNQ504T8 468 aa10.99□□□□□ -0.65
CDH3-202ENST00000429102 RAET1LQ5VY80 246 aa10.99□□□□□ -0.65
CDH3-202ENST00000429102 FDX2Q6P4F2 183 aa10.99□□□□□ -0.65
CDH3-202ENST00000429102 MISPQ8IVT2 679 aa10.99□□□□□ -0.65
CDH3-202ENST00000429102 OR5AS1Q8N127 324 aa10.99□□□□□ -0.65
CDH3-202ENST00000429102 TMEM217Q8N7C4 229 aa10.99□□□□□ -0.65
CDH3-202ENST00000429102 SLC25A43Q8WUT9 341 aaPredicted RBP10.99□□□□□ -0.65
CDH3-202ENST00000429102 GVINP1Q7Z2Y8 2422 aa10.99□□□□□ -0.65
CDH3-202ENST00000429102 FTCDNL1E5RQL4 147 aa10.99□□□□□ -0.65
CDH3-202ENST00000429102 BPNT1O95861 308 aa10.99□□□□□ -0.65
CDH3-202ENST00000429102 CAV2P51636 162 aa10.99□□□□□ -0.65
CDH3-202ENST00000429102 MTCP1P56278 107 aa10.99□□□□□ -0.65
CDH3-202ENST00000429102 C9orf152Q5JTZ5 239 aa10.99□□□□□ -0.65
CDH3-202ENST00000429102 SPIN3Q5JUX0 258 aa10.99□□□□□ -0.65
CDH3-202ENST00000429102 MFSD8Q8NHS3 518 aa10.99□□□□□ -0.65
CDH3-202ENST00000429102 ZNF837Q96EG3 531 aaPredicted RBP10.99□□□□□ -0.65
CDH3-202ENST00000429102 UCN2Q96RP3 112 aa10.99□□□□□ -0.65
CDH3-202ENST00000429102 SH3BGRL3Q9H299 93 aa10.99□□□□□ -0.65
CDH3-202ENST00000429102 IGHV3-64DA0A0J9YX35 117 aa10.98□□□□□ -0.65
CDH3-202ENST00000429102 APOC1P02654 83 aa10.98□□□□□ -0.65
CDH3-202ENST00000429102 RPS10P46783 165 aaKnown RBP10.98□□□□□ -0.65
CDH3-202ENST00000429102 GABRA4P48169 554 aa10.98□□□□□ -0.65
CDH3-202ENST00000429102 RGS19P49795 217 aa10.98□□□□□ -0.65
CDH3-202ENST00000429102 CYCSP99999 105 aaKnown RBP10.98□□□□□ -0.65
CDH3-202ENST00000429102 FABP9Q0Z7S8 132 aa10.98□□□□□ -0.65
CDH3-202ENST00000429102 PCK2Q16822 640 aa10.98□□□□□ -0.65
CDH3-202ENST00000429102 OR11L1Q8NGX0 322 aa10.98□□□□□ -0.65
CDH3-202ENST00000429102 GLYATL2Q8WU03 294 aa10.98□□□□□ -0.65
CDH3-202ENST00000429102 R4GN57 208 aa10.98□□□□□ -0.65
CDH3-202ENST00000429102 A0A1W2PPE2 198 aa10.98□□□□□ -0.65
CDH3-202ENST00000429102 HPNP05981 417 aa10.98□□□□□ -0.65
CDH3-202ENST00000429102 NME1P15531 152 aaKnown RBP10.98□□□□□ -0.65
CDH3-202ENST00000429102 ZNF44P15621 663 aa10.98□□□□□ -0.65
CDH3-202ENST00000429102 PTGER4P35408 488 aa10.98□□□□□ -0.65
CDH3-202ENST00000429102 RFC3P40938 356 aa10.98□□□□□ -0.65
CDH3-202ENST00000429102 SSBP1Q04837 148 aaKnown RBP10.98□□□□□ -0.65
CDH3-202ENST00000429102 LYZL2Q7Z4W2 148 aa10.98□□□□□ -0.65
CDH3-202ENST00000429102 C17orf78Q8N4C9 275 aa10.98□□□□□ -0.65
CDH3-202ENST00000429102 FAM213BQ8TBF2 198 aa10.98□□□□□ -0.65
CDH3-202ENST00000429102 EDAQ92838 391 aa10.98□□□□□ -0.65
CDH3-202ENST00000429102 KIRREL1Q96J84 757 aa10.98□□□□□ -0.65
CDH3-202ENST00000429102 SLC2A8Q9NY64 477 aa10.98□□□□□ -0.65
CDH3-202ENST00000429102 MCTS1Q9ULC4 181 aaKnown RBP10.98□□□□□ -0.65
CDH3-202ENST00000429102 B3GALT5Q9Y2C3 310 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms