RNA–Protein interactions for RNA: ENST00000428287.6

RIF1-203, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-203ENST00000428287 BPNT1O95861 308 aa4.54□□□□□ -1.68
RIF1-203ENST00000428287 SNRNP70P08621 437 aaKnown RBP4.54□□□□□ -1.68
RIF1-203ENST00000428287 TRGC1P0CF51 173 aa4.54□□□□□ -1.68
RIF1-203ENST00000428287 VSIG8P0DPA2 414 aa4.54□□□□□ -1.68
RIF1-203ENST00000428287 FCGR2CP31995 323 aa4.54□□□□□ -1.68
RIF1-203ENST00000428287 MFGE8Q08431 387 aaPredicted RBP4.54□□□□□ -1.68
RIF1-203ENST00000428287 FAM220AQ7Z4H9 259 aa4.54□□□□□ -1.68
RIF1-203ENST00000428287 ACBD4Q8NC06 268 aa4.54□□□□□ -1.68
RIF1-203ENST00000428287 FRZBQ92765 325 aa4.54□□□□□ -1.68
RIF1-203ENST00000428287 LPAR5Q9H1C0 372 aa4.54□□□□□ -1.68
RIF1-203ENST00000428287 FLNCQ14315 2725 aa4.54□□□□□ -1.68
RIF1-203ENST00000428287 ZNF732B4DXR9 585 aa4.54□□□□□ -1.68
RIF1-203ENST00000428287 M0QZK8 103 aa4.54□□□□□ -1.68
RIF1-203ENST00000428287 RRP8O43159 456 aaKnown RBP4.54□□□□□ -1.68
RIF1-203ENST00000428287 GGCTO75223 188 aaKnown RBP4.54□□□□□ -1.68
RIF1-203ENST00000428287 C1QL1O75973 258 aa4.54□□□□□ -1.68
RIF1-203ENST00000428287 ZNF117Q03924 483 aa4.54□□□□□ -1.68
RIF1-203ENST00000428287 CPEB4Q17RY0 729 aaKnown RBP eCLIP4.54□□□□□ -1.68
RIF1-203ENST00000428287 TMEM241Q24JQ0 296 aa4.54□□□□□ -1.68
RIF1-203ENST00000428287 STT3BQ8TCJ2 826 aa4.54□□□□□ -1.68
RIF1-203ENST00000428287 GRHL3Q8TE85 626 aa4.54□□□□□ -1.68
RIF1-203ENST00000428287 MKKSQ9NPJ1 570 aaPredicted RBP4.54□□□□□ -1.68
RIF1-203ENST00000428287 SUSD2Q9UGT4 822 aa4.54□□□□□ -1.68
RIF1-203ENST00000428287 IGLV1-36A0A0B4J1U3 117 aa4.54□□□□□ -1.68
RIF1-203ENST00000428287 H3BQ15 152 aa4.54□□□□□ -1.68
RIF1-203ENST00000428287 H7C1Q1 480 aa4.54□□□□□ -1.68
RIF1-203ENST00000428287 C6P13671 934 aa4.54□□□□□ -1.68
RIF1-203ENST00000428287 COL9A2Q14055 689 aaPredicted RBP4.54□□□□□ -1.68
RIF1-203ENST00000428287 RIPPLY2Q5TAB7 128 aa4.54□□□□□ -1.68
RIF1-203ENST00000428287 CST9Q5W186 159 aa4.54□□□□□ -1.68
RIF1-203ENST00000428287 SHDQ96IW2 340 aa4.54□□□□□ -1.68
RIF1-203ENST00000428287 TTTY10Q9BZA0 68 aa4.54□□□□□ -1.68
RIF1-203ENST00000428287 SRD5A3Q9H8P0 318 aa4.54□□□□□ -1.68
RIF1-203ENST00000428287 SLC25A13Q9UJS0 675 aa4.54□□□□□ -1.68
RIF1-203ENST00000428287 IFNA6P05013 189 aa4.54□□□□□ -1.68
RIF1-203ENST00000428287 GABRR1P24046 479 aa4.54□□□□□ -1.68
RIF1-203ENST00000428287 UCP1P25874 307 aa4.54□□□□□ -1.68
RIF1-203ENST00000428287 AKT2P31751 481 aa4.54□□□□□ -1.68
RIF1-203ENST00000428287 NPBWR2P48146 333 aa4.54□□□□□ -1.68
RIF1-203ENST00000428287 TNFSF10P50591 281 aa4.54□□□□□ -1.68
RIF1-203ENST00000428287 PAX5Q02548 391 aa4.54□□□□□ -1.68
RIF1-203ENST00000428287 FZD2Q14332 565 aa4.54□□□□□ -1.68
RIF1-203ENST00000428287 FBXW9Q5XUX1 488 aa4.54□□□□□ -1.68
RIF1-203ENST00000428287 TAF8Q7Z7C8 310 aa4.54□□□□□ -1.68
RIF1-203ENST00000428287 HHIPL1Q96JK4 782 aa4.54□□□□□ -1.68
RIF1-203ENST00000428287 RHOVQ96L33 236 aa4.54□□□□□ -1.68
RIF1-203ENST00000428287 NRTNQ99748 197 aa4.54□□□□□ -1.68
RIF1-203ENST00000428287 CMKLR1Q99788 373 aa4.54□□□□□ -1.68
RIF1-203ENST00000428287 C20orf144Q9BQM9 153 aa4.54□□□□□ -1.68
RIF1-203ENST00000428287 WSB1Q9Y6I7 421 aa4.54□□□□□ -1.68
RIF1-203ENST00000428287 CDRT15L2A8MXV6 281 aa4.53□□□□□ -1.68
RIF1-203ENST00000428287 AGPAT2O15120 278 aa4.53□□□□□ -1.68
RIF1-203ENST00000428287 CDS2O95674 445 aa4.53□□□□□ -1.68
RIF1-203ENST00000428287 DBHP09172 617 aa4.53□□□□□ -1.68
RIF1-203ENST00000428287 PCP4P48539 62 aa4.53□□□□□ -1.68
RIF1-203ENST00000428287 CTXN1P60606 82 aa4.53□□□□□ -1.68
RIF1-203ENST00000428287 INSM1Q01101 510 aaPredicted RBP4.53□□□□□ -1.68
RIF1-203ENST00000428287 ZNF627Q7L945 461 aa4.53□□□□□ -1.68
RIF1-203ENST00000428287 OR52N4Q8NGI2 321 aa4.53□□□□□ -1.68
RIF1-203ENST00000428287 CPNE2Q96FN4 548 aaPredicted RBP4.53□□□□□ -1.68
RIF1-203ENST00000428287 LMF1Q96S06 567 aa4.53□□□□□ -1.68
RIF1-203ENST00000428287 RBFOX3A6NFN3 312 aa4.53□□□□□ -1.68
RIF1-203ENST00000428287 DDNO94850 711 aaPredicted RBP4.53□□□□□ -1.68
RIF1-203ENST00000428287 SLC35G4P0C7Q5 338 aa4.53□□□□□ -1.68
RIF1-203ENST00000428287 CTNNB1P35222 781 aa4.53□□□□□ -1.68
RIF1-203ENST00000428287 FHITP49789 147 aa4.53□□□□□ -1.68
RIF1-203ENST00000428287 AFF3P51826 1226 aaKnown RBP4.53□□□□□ -1.68
RIF1-203ENST00000428287 CASP6P55212 293 aa4.53□□□□□ -1.68
RIF1-203ENST00000428287 PLPP4Q5VZY2 271 aa4.53□□□□□ -1.68
RIF1-203ENST00000428287 GGNBP1Q5YKI7 109 aa4.53□□□□□ -1.68
RIF1-203ENST00000428287 NPAS4Q8IUM7 802 aa4.53□□□□□ -1.68
RIF1-203ENST00000428287 FAM219AQ8IW50 185 aa4.53□□□□□ -1.68
RIF1-203ENST00000428287 SLC26A10Q8NG04 563 aa4.53□□□□□ -1.68
RIF1-203ENST00000428287 OR13C9Q8NGT0 318 aa4.53□□□□□ -1.68
RIF1-203ENST00000428287 ZNF519Q8TB69 540 aa4.53□□□□□ -1.68
RIF1-203ENST00000428287 ADAD1Q96M93 576 aaKnown RBP4.53□□□□□ -1.68
RIF1-203ENST00000428287 SERINC2Q96SA4 455 aa4.53□□□□□ -1.68
RIF1-203ENST00000428287 TIMM29Q9BSF4 260 aa4.53□□□□□ -1.68
RIF1-203ENST00000428287 CNTD2Q9H8S5 307 aa4.53□□□□□ -1.68
RIF1-203ENST00000428287 ELOVL3Q9HB03 270 aa4.53□□□□□ -1.68
RIF1-203ENST00000428287 CDH20Q9HBT6 801 aa4.53□□□□□ -1.68
RIF1-203ENST00000428287 MARCH11A6NNE9 402 aa4.53□□□□□ -1.68
RIF1-203ENST00000428287 RPL18Q07020 188 aaKnown RBP4.53□□□□□ -1.68
RIF1-203ENST00000428287 SLC22A24Q8N4F4 322 aa4.53□□□□□ -1.68
RIF1-203ENST00000428287 AVL9Q8NBF6 648 aa4.53□□□□□ -1.68
RIF1-203ENST00000428287 AGBL5Q8NDL9 886 aa4.53□□□□□ -1.68
RIF1-203ENST00000428287 OR51G1Q8NGK1 321 aa4.53□□□□□ -1.68
RIF1-203ENST00000428287 OR52N5Q8NH56 324 aa4.53□□□□□ -1.68
RIF1-203ENST00000428287 FLVCR1-AS1Q8TAF5 88 aa4.53□□□□□ -1.68
RIF1-203ENST00000428287 TMEM171Q8WVE6 324 aa4.53□□□□□ -1.68
RIF1-203ENST00000428287 FAM210BQ96KR6 192 aa4.53□□□□□ -1.68
RIF1-203ENST00000428287 UBE2ZQ9H832 354 aaPredicted RBP4.53□□□□□ -1.68
RIF1-203ENST00000428287 HCSTQ9UBK5 93 aa4.53□□□□□ -1.68
RIF1-203ENST00000428287 A0A087WZY1 265 aa4.53□□□□□ -1.68
RIF1-203ENST00000428287 RPP14O95059 124 aaKnown RBP4.53□□□□□ -1.68
RIF1-203ENST00000428287 PRNPP04156 253 aa4.53□□□□□ -1.68
RIF1-203ENST00000428287 EPHA8P29322 1005 aaPredicted RBP4.53□□□□□ -1.68
RIF1-203ENST00000428287 GABRA4P48169 554 aa4.53□□□□□ -1.68
RIF1-203ENST00000428287 RND3P61587 244 aa4.53□□□□□ -1.68
RIF1-203ENST00000428287 SCGB2B2Q4G0G5 96 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms