RNA–Protein interactions for RNA: ENST00000428064.5

LIMS1-208, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 2

Gene LIMS1, Length 637 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-208ENST00000428064 THTPAQ9BU02 230 aa17.24■□□□□ 0.35
LIMS1-208ENST00000428064 TEX12Q9BXU0 123 aa17.24■□□□□ 0.35
LIMS1-208ENST00000428064 YIPF3Q9GZM5 350 aa17.24■□□□□ 0.35
LIMS1-208ENST00000428064 WDR13Q9H1Z4 485 aa17.24■□□□□ 0.35
LIMS1-208ENST00000428064 YY1AP1Q9H869 796 aa17.24■□□□□ 0.35
LIMS1-208ENST00000428064 LAMP5Q9UJQ1 280 aa17.24■□□□□ 0.35
LIMS1-208ENST00000428064 FAM96BQ9Y3D0 163 aa17.24■□□□□ 0.35
LIMS1-208ENST00000428064 ZNF816-ZNF321PA0A0X1KG74 233 aa17.23■□□□□ 0.35
LIMS1-208ENST00000428064 SIGLEC5O15389 551 aa17.23■□□□□ 0.35
LIMS1-208ENST00000428064 E2F6O75461 281 aa17.23■□□□□ 0.35
LIMS1-208ENST00000428064 CLPXO76031 633 aa17.23■□□□□ 0.35
LIMS1-208ENST00000428064 ATP6V1B1P15313 513 aa17.23■□□□□ 0.35
LIMS1-208ENST00000428064 KCTD18Q6PI47 426 aaPredicted RBP17.23■□□□□ 0.35
LIMS1-208ENST00000428064 BRICD5Q6PL45 260 aa17.23■□□□□ 0.35
LIMS1-208ENST00000428064 KCTD8Q6ZWB6 473 aa17.23■□□□□ 0.35
LIMS1-208ENST00000428064 LINC01006Q8NI28 216 aa17.23■□□□□ 0.35
LIMS1-208ENST00000428064 SIRT7Q9NRC8 400 aa17.23■□□□□ 0.35
LIMS1-208ENST00000428064 FAM206AQ9NX38 181 aa17.23■□□□□ 0.35
LIMS1-208ENST00000428064 RNF114Q9Y508 228 aa17.23■□□□□ 0.35
LIMS1-208ENST00000428064 RNASEK-C17orf49H0YIS7 233 aa17.22■□□□□ 0.35
LIMS1-208ENST00000428064 M0R1W7 72 aa17.22■□□□□ 0.35
LIMS1-208ENST00000428064 TIMM23O14925 209 aa17.22■□□□□ 0.35
LIMS1-208ENST00000428064 AKR7A2O43488 359 aa17.22■□□□□ 0.35
LIMS1-208ENST00000428064 IGLV3-1P01715 115 aa17.22■□□□□ 0.35
LIMS1-208ENST00000428064 MAP2K3P46734 347 aa17.22■□□□□ 0.35
LIMS1-208ENST00000428064 GNG3P63215 75 aa17.22■□□□□ 0.35
LIMS1-208ENST00000428064 SRSF4Q08170 494 aaKnown RBP17.22■□□□□ 0.35
LIMS1-208ENST00000428064 DGUOKQ16854 277 aa17.22■□□□□ 0.35
LIMS1-208ENST00000428064 CEACAM21Q3KPI0 293 aa17.22■□□□□ 0.35
LIMS1-208ENST00000428064 ZBTB37Q5TC79 503 aa17.22■□□□□ 0.35
LIMS1-208ENST00000428064 TRPM8Q7Z2W7 1104 aa17.22■□□□□ 0.35
LIMS1-208ENST00000428064 KRT77Q7Z794 578 aa17.22■□□□□ 0.35
LIMS1-208ENST00000428064 PDZD9Q8IXQ8 264 aa17.22■□□□□ 0.35
LIMS1-208ENST00000428064 HS3ST5Q8IZT8 346 aa17.22■□□□□ 0.35
LIMS1-208ENST00000428064 ZSCAN4Q8NAM6 433 aaPredicted RBP17.22■□□□□ 0.35
LIMS1-208ENST00000428064 BBS1Q8NFJ9 593 aa17.22■□□□□ 0.35
LIMS1-208ENST00000428064 OR5T2Q8NGG2 359 aa17.22■□□□□ 0.35
LIMS1-208ENST00000428064 TNFRSF14Q92956 283 aa17.22■□□□□ 0.35
LIMS1-208ENST00000428064 HIST1H2AAQ96QV6 131 aa17.22■□□□□ 0.35
LIMS1-208ENST00000428064 SNTG1Q9NSN8 517 aa17.22■□□□□ 0.35
LIMS1-208ENST00000428064 NLKQ9UBE8 527 aa17.22■□□□□ 0.35
LIMS1-208ENST00000428064 SLC25A10Q9UBX3 287 aaPredicted RBP17.22■□□□□ 0.35
LIMS1-208ENST00000428064 VPREB3Q9UKI3 123 aa17.22■□□□□ 0.35
LIMS1-208ENST00000428064 NPFFO15130 113 aa17.21■□□□□ 0.35
LIMS1-208ENST00000428064 ACAA1P09110 424 aaPredicted RBP17.21■□□□□ 0.35
LIMS1-208ENST00000428064 SELLP14151 372 aa17.21■□□□□ 0.35
LIMS1-208ENST00000428064 EEF1B2P24534 225 aaKnown RBP17.21■□□□□ 0.35
LIMS1-208ENST00000428064 PROK1P58294 105 aa17.21■□□□□ 0.35
LIMS1-208ENST00000428064 RPS7P62081 194 aaKnown RBP17.21■□□□□ 0.35
LIMS1-208ENST00000428064 ROM1Q03395 351 aa17.21■□□□□ 0.35
LIMS1-208ENST00000428064 TAF9Q16594 264 aa17.21■□□□□ 0.35
LIMS1-208ENST00000428064 NCR3LG1Q68D85 454 aa17.21■□□□□ 0.35
LIMS1-208ENST00000428064 FAM81AQ8TBF8 368 aa17.21■□□□□ 0.35
LIMS1-208ENST00000428064 H1FXQ92522 213 aaKnown RBP17.21■□□□□ 0.35
LIMS1-208ENST00000428064 MROQ9BYG7 248 aa17.21■□□□□ 0.35
LIMS1-208ENST00000428064 OR51I2Q9H344 312 aa17.21■□□□□ 0.35
LIMS1-208ENST00000428064 C16orf95Q9H693 158 aa17.21■□□□□ 0.35
LIMS1-208ENST00000428064 DNAJB9Q9UBS3 223 aa17.21■□□□□ 0.35
LIMS1-208ENST00000428064 BTBD17A6NE02 478 aa17.2■□□□□ 0.34
LIMS1-208ENST00000428064 OR5B21A6NL26 309 aa17.2■□□□□ 0.34
LIMS1-208ENST00000428064 OR2AT4A6NND4 320 aa17.2■□□□□ 0.34
LIMS1-208ENST00000428064 M0QZ24 198 aa17.2■□□□□ 0.34
LIMS1-208ENST00000428064 ZNF254O75437 659 aa17.2■□□□□ 0.34
LIMS1-208ENST00000428064 GLRA1P23415 457 aa17.2■□□□□ 0.34
LIMS1-208ENST00000428064 GPM6AP51674 278 aa17.2■□□□□ 0.34
LIMS1-208ENST00000428064 UBE2E1P51965 193 aa17.2■□□□□ 0.34
LIMS1-208ENST00000428064 ACSM1Q08AH1 577 aa17.2■□□□□ 0.34
LIMS1-208ENST00000428064 APOFQ13790 326 aa17.2■□□□□ 0.34
LIMS1-208ENST00000428064 DNAL1Q4LDG9 190 aa17.2■□□□□ 0.34
LIMS1-208ENST00000428064 OR5A2Q8NGI9 324 aa17.2■□□□□ 0.34
LIMS1-208ENST00000428064 NRBF2Q96F24 287 aa17.2■□□□□ 0.34
LIMS1-208ENST00000428064 TEAD3Q99594 435 aa17.2■□□□□ 0.34
LIMS1-208ENST00000428064 MMP27Q9H306 513 aa17.2■□□□□ 0.34
LIMS1-208ENST00000428064 METTL8Q9H825 291 aaKnown RBP17.2■□□□□ 0.34
LIMS1-208ENST00000428064 ZNF222Q9UK12 451 aa17.2■□□□□ 0.34
LIMS1-208ENST00000428064 TMEM14AQ9Y6G1 99 aa17.2■□□□□ 0.34
LIMS1-208ENST00000428064 TRBV23-1A0A0A0MS06 115 aa17.19■□□□□ 0.34
LIMS1-208ENST00000428064 TMEM269A0A1B0GVZ9 245 aa17.19■□□□□ 0.34
LIMS1-208ENST00000428064 TCRBV3S1A0A5B6 114 aa17.19■□□□□ 0.34
LIMS1-208ENST00000428064 FKBP6O75344 327 aa17.19■□□□□ 0.34
LIMS1-208ENST00000428064 PRKACGP22612 351 aa17.19■□□□□ 0.34
LIMS1-208ENST00000428064 KRTAP10-3P60369 221 aa17.19■□□□□ 0.34
LIMS1-208ENST00000428064 GMFBP60983 142 aa17.19■□□□□ 0.34
LIMS1-208ENST00000428064 CBX1P83916 185 aa17.19■□□□□ 0.34
LIMS1-208ENST00000428064 FLOT2Q14254 428 aa17.19■□□□□ 0.34
LIMS1-208ENST00000428064 PDLIM3Q53GG5 364 aaPredicted RBP17.19■□□□□ 0.34
LIMS1-208ENST00000428064 LCN1P1Q5VSP4 162 aa17.19■□□□□ 0.34
LIMS1-208ENST00000428064 TMEM236Q5W0B7 351 aa17.19■□□□□ 0.34
LIMS1-208ENST00000428064 ZNF679Q8IYX0 411 aa17.19■□□□□ 0.34
LIMS1-208ENST00000428064 OR5R1Q8NH85 324 aa17.19■□□□□ 0.34
LIMS1-208ENST00000428064 ASB17Q8WXJ9 295 aa17.19■□□□□ 0.34
LIMS1-208ENST00000428064 PBOV1Q9GZY1 135 aa17.19■□□□□ 0.34
LIMS1-208ENST00000428064 SEMA6AQ9H2E6 1030 aa17.19■□□□□ 0.34
LIMS1-208ENST00000428064 VWFP04275 2813 aa17.18■□□□□ 0.34
LIMS1-208ENST00000428064 IGKV1D-17A0A075B6S4 117 aa17.18■□□□□ 0.34
LIMS1-208ENST00000428064 CCDC182A6NF36 153 aa17.18■□□□□ 0.34
LIMS1-208ENST00000428064 ZNF732B4DXR9 585 aa17.18■□□□□ 0.34
LIMS1-208ENST00000428064 RHBDL1O75783 438 aa17.18■□□□□ 0.34
LIMS1-208ENST00000428064 TSPAN9O75954 239 aa17.18■□□□□ 0.34
LIMS1-208ENST00000428064 SAA4P35542 130 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms