RNA–Protein interactions for RNA: ENST00000425836.6

VEGFA-209, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,575 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-209ENST00000425836 A6NLC8 198 aa20.62■□□□□ 0.89
VEGFA-209ENST00000425836 TMEM210A6NLX4 147 aa20.62■□□□□ 0.89
VEGFA-209ENST00000425836 MRPS14O60783 128 aaKnown RBP20.62■□□□□ 0.89
VEGFA-209ENST00000425836 CYB5R3P00387 301 aaPredicted RBP20.62■□□□□ 0.89
VEGFA-209ENST00000425836 ZNF20P17024 532 aa20.62■□□□□ 0.89
VEGFA-209ENST00000425836 GNG3P63215 75 aa20.62■□□□□ 0.89
VEGFA-209ENST00000425836 AVPI1Q5T686 147 aa20.62■□□□□ 0.89
VEGFA-209ENST00000425836 ZNF826PQ6ZT77 177 aa20.62■□□□□ 0.89
VEGFA-209ENST00000425836 GPR148Q8TDV2 347 aa20.62■□□□□ 0.89
VEGFA-209ENST00000425836 PP6455Q8WZ26 134 aa20.62■□□□□ 0.89
VEGFA-209ENST00000425836 TLNRD1Q9H1K6 362 aa20.62■□□□□ 0.89
VEGFA-209ENST00000425836 DHDHQ9UQ10 334 aa20.62■□□□□ 0.89
VEGFA-209ENST00000425836 WIPI2Q9Y4P8 454 aa20.62■□□□□ 0.89
VEGFA-209ENST00000425836 MAP1AP78559 2803 aaPredicted RBP20.62■□□□□ 0.89
VEGFA-209ENST00000425836 IGHV4-61A0A0C4DH41 118 aa20.61■□□□□ 0.89
VEGFA-209ENST00000425836 CD1AP06126 327 aa20.61■□□□□ 0.89
VEGFA-209ENST00000425836 USF1P22415 310 aaPredicted RBP20.61■□□□□ 0.89
VEGFA-209ENST00000425836 MAPK1IP1LQ8NDC0 245 aa20.61■□□□□ 0.89
VEGFA-209ENST00000425836 OR11L1Q8NGX0 322 aa20.61■□□□□ 0.89
VEGFA-209ENST00000425836 TSEN15Q8WW01 171 aaKnown RBP20.61■□□□□ 0.89
VEGFA-209ENST00000425836 RAB1CQ92928 201 aa20.61■□□□□ 0.89
VEGFA-209ENST00000425836 COX4I2Q96KJ9 171 aa20.61■□□□□ 0.89
VEGFA-209ENST00000425836 NPTNQ9Y639 398 aa20.61■□□□□ 0.89
VEGFA-209ENST00000425836 OR5B21A6NL26 309 aa20.6■□□□□ 0.89
VEGFA-209ENST00000425836 LRRC30A6NM36 301 aa20.6■□□□□ 0.89
VEGFA-209ENST00000425836 GATBO75879 557 aaKnown RBP20.6■□□□□ 0.89
VEGFA-209ENST00000425836 SERPINA3P01011 423 aa20.6■□□□□ 0.89
VEGFA-209ENST00000425836 CD99P14209 185 aa20.6■□□□□ 0.89
VEGFA-209ENST00000425836 LOXL1Q08397 574 aaPredicted RBP20.6■□□□□ 0.89
VEGFA-209ENST00000425836 TBCEQ15813 527 aaPredicted RBP20.6■□□□□ 0.89
VEGFA-209ENST00000425836 UTS2BQ765I0 119 aa20.6■□□□□ 0.89
VEGFA-209ENST00000425836 OR13C5Q8NGS8 318 aa20.6■□□□□ 0.89
VEGFA-209ENST00000425836 RPL3LQ92901 407 aaKnown RBP20.6■□□□□ 0.89
VEGFA-209ENST00000425836 HPS1Q92902 700 aa20.6■□□□□ 0.89
VEGFA-209ENST00000425836 TIMD4Q96H15 378 aa20.6■□□□□ 0.89
VEGFA-209ENST00000425836 OR51I2Q9H344 312 aa20.6■□□□□ 0.89
VEGFA-209ENST00000425836 RNF7Q9UBF6 113 aa20.6■□□□□ 0.89
VEGFA-209ENST00000425836 ITPR3Q14573 2671 aa20.6■□□□□ 0.89
VEGFA-209ENST00000425836 PQLC2LA1A4F0 135 aa20.59■□□□□ 0.89
VEGFA-209ENST00000425836 CDIPTO14735 213 aa20.59■□□□□ 0.89
VEGFA-209ENST00000425836 WNT9BO14905 357 aa20.59■□□□□ 0.89
VEGFA-209ENST00000425836 SMAD7O15105 426 aaKnown RBP20.59■□□□□ 0.89
VEGFA-209ENST00000425836 IRF2P14316 349 aa20.59■□□□□ 0.89
VEGFA-209ENST00000425836 SOX2P48431 317 aa20.59■□□□□ 0.89
VEGFA-209ENST00000425836 RPS11P62280 158 aaKnown RBP eCLIP20.59■□□□□ 0.89
VEGFA-209ENST00000425836 YIF1BQ5BJH7 314 aa20.59■□□□□ 0.89
VEGFA-209ENST00000425836 PEG10Q86TG7 708 aaKnown RBP20.59■□□□□ 0.89
VEGFA-209ENST00000425836 PARP16Q8N5Y8 322 aa20.59■□□□□ 0.89
VEGFA-209ENST00000425836 ACOT13Q9NPJ3 140 aa20.59■□□□□ 0.89
VEGFA-209ENST00000425836 CHD3Q12873 2000 aaKnown RBP20.59■□□□□ 0.89
VEGFA-209ENST00000425836 ZNF469Q96JG9 3925 aaPredicted RBP20.59■□□□□ 0.89
VEGFA-209ENST00000425836 IGKV1-9A0A0C4DH69 117 aa20.59■□□□□ 0.89
VEGFA-209ENST00000425836 LRP5LA4QPB2 252 aa20.59■□□□□ 0.89
VEGFA-209ENST00000425836 HOXA4Q00056 320 aaPredicted RBP20.59■□□□□ 0.89
VEGFA-209ENST00000425836 EMX1Q04741 257 aaPredicted RBP20.59■□□□□ 0.89
VEGFA-209ENST00000425836 C1orf87Q8N0U7 546 aa20.59■□□□□ 0.89
VEGFA-209ENST00000425836 SPARTQ8N0X7 666 aa20.59■□□□□ 0.89
VEGFA-209ENST00000425836 SCCPDHQ8NBX0 429 aa20.59■□□□□ 0.89
VEGFA-209ENST00000425836 TECTBQ96PL2 329 aa20.59■□□□□ 0.89
VEGFA-209ENST00000425836 ISYNA1Q9NPH2 558 aa20.59■□□□□ 0.89
VEGFA-209ENST00000425836 SLC7A11Q9UPY5 501 aa20.59■□□□□ 0.89
VEGFA-209ENST00000425836 TRBV5-5A0A0J9YX44 114 aa20.58■□□□□ 0.88
VEGFA-209ENST00000425836 hCG_1807616A0A1W2PRN6 198 aa20.58■□□□□ 0.88
VEGFA-209ENST00000425836 IGHV2-70P01814 119 aa20.58■□□□□ 0.88
VEGFA-209ENST00000425836 OCM2P0CE71 109 aa20.58■□□□□ 0.88
VEGFA-209ENST00000425836 HSMCR30P0CW71 290 aa20.58■□□□□ 0.88
VEGFA-209ENST00000425836 ATF1P18846 271 aa20.58■□□□□ 0.88
VEGFA-209ENST00000425836 KCTD21Q4G0X4 260 aa20.58■□□□□ 0.88
VEGFA-209ENST00000425836 FAM201AQ5SY85 155 aa20.58■□□□□ 0.88
VEGFA-209ENST00000425836 WDR82Q6UXN9 313 aa20.58■□□□□ 0.88
VEGFA-209ENST00000425836 SERPINA12Q8IW75 414 aa20.58■□□□□ 0.88
VEGFA-209ENST00000425836 TRMT10AQ8TBZ6 339 aaKnown RBP20.58■□□□□ 0.88
VEGFA-209ENST00000425836 NPRL2Q8WTW4 380 aa20.58■□□□□ 0.88
VEGFA-209ENST00000425836 C18orf12Q96KH6 178 aa20.58■□□□□ 0.88
VEGFA-209ENST00000425836 NARFLQ9H6Q4 476 aa20.58■□□□□ 0.88
VEGFA-209ENST00000425836 FAM230AA0A1W2PPH8 454 aa20.57■□□□□ 0.88
VEGFA-209ENST00000425836 ZNF205O95201 554 aa20.57■□□□□ 0.88
VEGFA-209ENST00000425836 BTG1P62324 171 aa20.57■□□□□ 0.88
VEGFA-209ENST00000425836 ZMYND11Q15326 602 aa20.57■□□□□ 0.88
VEGFA-209ENST00000425836 SVOPQ8N4V2 548 aa20.57■□□□□ 0.88
VEGFA-209ENST00000425836 OR5D14Q8NGL3 314 aa20.57■□□□□ 0.88
VEGFA-209ENST00000425836 ZCCHC4Q9H5U6 513 aa20.57■□□□□ 0.88
VEGFA-209ENST00000425836 METTL17Q9H7H0 456 aaPredicted RBP20.57■□□□□ 0.88
VEGFA-209ENST00000425836 LRCH1Q9Y2L9 728 aa20.57■□□□□ 0.88
VEGFA-209ENST00000425836 LHBP01229 141 aa20.56■□□□□ 0.88
VEGFA-209ENST00000425836 CFHR2P36980 270 aa20.56■□□□□ 0.88
VEGFA-209ENST00000425836 FUT6P51993 359 aa20.56■□□□□ 0.88
VEGFA-209ENST00000425836 CHN2P52757 468 aa20.56■□□□□ 0.88
VEGFA-209ENST00000425836 MLLT11Q13015 90 aaPredicted RBP20.56■□□□□ 0.88
VEGFA-209ENST00000425836 GPR50Q13585 617 aa20.56■□□□□ 0.88
VEGFA-209ENST00000425836 TPBGQ13641 420 aa20.56■□□□□ 0.88
VEGFA-209ENST00000425836 CNN3Q15417 329 aaKnown RBP20.56■□□□□ 0.88
VEGFA-209ENST00000425836 ZNF773Q6PK81 442 aa20.56■□□□□ 0.88
VEGFA-209ENST00000425836 ZNF367Q7RTV3 350 aa20.56■□□□□ 0.88
VEGFA-209ENST00000425836 LRRC28Q86X40 367 aaPredicted RBP20.56■□□□□ 0.88
VEGFA-209ENST00000425836 GCSAMQ8N6F7 178 aa20.56■□□□□ 0.88
VEGFA-209ENST00000425836 OR13C9Q8NGT0 318 aa20.56■□□□□ 0.88
VEGFA-209ENST00000425836 UFD1Q92890 307 aa20.56■□□□□ 0.88
VEGFA-209ENST00000425836 TMEM106AQ96A25 262 aa20.56■□□□□ 0.88
VEGFA-209ENST00000425836 OPALINQ96PE5 141 aa20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms