RNA–Protein interactions for RNA: ENST00000425319.1

HLA-DQB3-203, Transcript of major histocompatibility complex, class II, DQ beta 3, humanhuman

BASIC

Gene HLA-DQB3, Length 356 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB3-203ENST00000425319 FOXJ3Q9UPW0 622 aa10.01□□□□□ -0.81
HLA-DQB3-203ENST00000425319 SIGLEC9Q9Y336 463 aa10.01□□□□□ -0.81
HLA-DQB3-203ENST00000425319 LRP12Q9Y561 859 aa10.01□□□□□ -0.81
HLA-DQB3-203ENST00000425319 DOCK11Q5JSL3 2073 aa10□□□□□ -0.81
HLA-DQB3-203ENST00000425319 hCG_38984A0A1B0GV85 526 aa10□□□□□ -0.81
HLA-DQB3-203ENST00000425319 F2RL2O00254 374 aa10□□□□□ -0.81
HLA-DQB3-203ENST00000425319 SPI1P17947 270 aa10□□□□□ -0.81
HLA-DQB3-203ENST00000425319 PRDX6P30041 224 aa10□□□□□ -0.81
HLA-DQB3-203ENST00000425319 GSTT1P30711 240 aa10□□□□□ -0.81
HLA-DQB3-203ENST00000425319 OR12D2P58182 307 aa10□□□□□ -0.81
HLA-DQB3-203ENST00000425319 RPL31P62899 125 aaKnown RBP10□□□□□ -0.81
HLA-DQB3-203ENST00000425319 GNG3P63215 75 aa10□□□□□ -0.81
HLA-DQB3-203ENST00000425319 DEFB121Q5J5C9 76 aa10□□□□□ -0.81
HLA-DQB3-203ENST00000425319 C8orf82Q6P1X6 216 aaPredicted RBP10□□□□□ -0.81
HLA-DQB3-203ENST00000425319 CALHM1Q8IU99 346 aa10□□□□□ -0.81
HLA-DQB3-203ENST00000425319 PNKDQ8N490 385 aa10□□□□□ -0.81
HLA-DQB3-203ENST00000425319 ZNF454Q8N9F8 522 aa10□□□□□ -0.81
HLA-DQB3-203ENST00000425319 OR5A2Q8NGI9 324 aa10□□□□□ -0.81
HLA-DQB3-203ENST00000425319 OR5K1Q8NHB7 308 aa10□□□□□ -0.81
HLA-DQB3-203ENST00000425319 ANGPTL6Q8NI99 470 aa10□□□□□ -0.81
HLA-DQB3-203ENST00000425319 RPS4Y2Q8TD47 263 aa10□□□□□ -0.81
HLA-DQB3-203ENST00000425319 RNF133Q8WVZ7 376 aa10□□□□□ -0.81
HLA-DQB3-203ENST00000425319 FOXRED1Q96CU9 486 aaPredicted RBP10□□□□□ -0.81
HLA-DQB3-203ENST00000425319 ITPKCQ96DU7 683 aa10□□□□□ -0.81
HLA-DQB3-203ENST00000425319 MALSU1Q96EH3 234 aa10□□□□□ -0.81
HLA-DQB3-203ENST00000425319 GAFA1Q96PS6 74 aa10□□□□□ -0.81
HLA-DQB3-203ENST00000425319 ABHD6Q9BV23 337 aa10□□□□□ -0.81
HLA-DQB3-203ENST00000425319 USE1Q9NZ43 259 aa10□□□□□ -0.81
HLA-DQB3-203ENST00000425319 TGP01266 2768 aa9.99□□□□□ -0.81
HLA-DQB3-203ENST00000425319 A0A1B0GW55 424 aa9.99□□□□□ -0.81
HLA-DQB3-203ENST00000425319 MTRF1O75570 445 aaKnown RBP9.99□□□□□ -0.81
HLA-DQB3-203ENST00000425319 PRB2P02812 416 aaPredicted RBP9.99□□□□□ -0.81
HLA-DQB3-203ENST00000425319 GYPBP06028 91 aa9.99□□□□□ -0.81
HLA-DQB3-203ENST00000425319 LYNP07948 512 aa9.99□□□□□ -0.81
HLA-DQB3-203ENST00000425319 DUX4L2P0CJ85 424 aa9.99□□□□□ -0.81
HLA-DQB3-203ENST00000425319 DUX4L3P0CJ86 424 aa9.99□□□□□ -0.81
HLA-DQB3-203ENST00000425319 DUX4L4P0CJ87 422 aa9.99□□□□□ -0.81
HLA-DQB3-203ENST00000425319 DUX4L5P0CJ88 424 aa9.99□□□□□ -0.81
HLA-DQB3-203ENST00000425319 DUX4L6P0CJ89 424 aa9.99□□□□□ -0.81
HLA-DQB3-203ENST00000425319 DUX4L7P0CJ90 424 aa9.99□□□□□ -0.81
HLA-DQB3-203ENST00000425319 ATP6V1B1P15313 513 aa9.99□□□□□ -0.81
HLA-DQB3-203ENST00000425319 MNAT1P51948 309 aa9.99□□□□□ -0.81
HLA-DQB3-203ENST00000425319 HMGA2P52926 109 aa9.99□□□□□ -0.81
HLA-DQB3-203ENST00000425319 PRB3Q04118 309 aaPredicted RBP9.99□□□□□ -0.81
HLA-DQB3-203ENST00000425319 CRMP1Q14194 572 aa9.99□□□□□ -0.81
HLA-DQB3-203ENST00000425319 DGUOKQ16854 277 aa9.99□□□□□ -0.81
HLA-DQB3-203ENST00000425319 OXLD1Q5BKU9 147 aa9.99□□□□□ -0.81
HLA-DQB3-203ENST00000425319 FAM76BQ5HYJ3 339 aa9.99□□□□□ -0.81
HLA-DQB3-203ENST00000425319 DUX4L9Q6RFH8 374 aaPredicted RBP9.99□□□□□ -0.81
HLA-DQB3-203ENST00000425319 KRT77Q7Z794 578 aa9.99□□□□□ -0.81
HLA-DQB3-203ENST00000425319 WDR86Q86TI4 376 aa9.99□□□□□ -0.81
HLA-DQB3-203ENST00000425319 COMMD2Q86X83 199 aa9.99□□□□□ -0.81
HLA-DQB3-203ENST00000425319 FGFRL1Q8N441 504 aa9.99□□□□□ -0.81
HLA-DQB3-203ENST00000425319 ZNF561Q8N587 486 aa9.99□□□□□ -0.81
HLA-DQB3-203ENST00000425319 RNF148Q8N7C7 305 aa9.99□□□□□ -0.81
HLA-DQB3-203ENST00000425319 ZNRF1Q8ND25 227 aa9.99□□□□□ -0.81
HLA-DQB3-203ENST00000425319 OR13D1Q8NGV5 346 aa9.99□□□□□ -0.81
HLA-DQB3-203ENST00000425319 OR2T27Q8NH04 317 aa9.99□□□□□ -0.81
HLA-DQB3-203ENST00000425319 TEX47Q8TBZ9 253 aa9.99□□□□□ -0.81
HLA-DQB3-203ENST00000425319 SEH1LQ96EE3 360 aa9.99□□□□□ -0.81
HLA-DQB3-203ENST00000425319 WDR13Q9H1Z4 485 aa9.99□□□□□ -0.81
HLA-DQB3-203ENST00000425319 DUX4Q9UBX2 424 aa9.99□□□□□ -0.81
HLA-DQB3-203ENST00000425319 ZMAT5Q9UDW3 170 aaKnown RBP9.99□□□□□ -0.81
HLA-DQB3-203ENST00000425319 ACOD1A6NK06 481 aa9.98□□□□□ -0.81
HLA-DQB3-203ENST00000425319 OR5B21A6NL26 309 aa9.98□□□□□ -0.81
HLA-DQB3-203ENST00000425319 ZNF732B4DXR9 585 aa9.98□□□□□ -0.81
HLA-DQB3-203ENST00000425319 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.98□□□□□ -0.81
HLA-DQB3-203ENST00000425319 E2F6O75461 281 aa9.98□□□□□ -0.81
HLA-DQB3-203ENST00000425319 DUS4LO95620 317 aaKnown RBP9.98□□□□□ -0.81
HLA-DQB3-203ENST00000425319 GASTP01350 101 aa9.98□□□□□ -0.81
HLA-DQB3-203ENST00000425319 PF4V1P10720 104 aa9.98□□□□□ -0.81
HLA-DQB3-203ENST00000425319 PSG2P11465 335 aa9.98□□□□□ -0.81
HLA-DQB3-203ENST00000425319 GPM6AP51674 278 aa9.98□□□□□ -0.81
HLA-DQB3-203ENST00000425319 ARHGDIBP52566 201 aa9.98□□□□□ -0.81
HLA-DQB3-203ENST00000425319 ACTR3P61158 418 aa9.98□□□□□ -0.81
HLA-DQB3-203ENST00000425319 MXRA7P84157 204 aa9.98□□□□□ -0.81
HLA-DQB3-203ENST00000425319 DCTN2Q13561 401 aaKnown RBP9.98□□□□□ -0.81
HLA-DQB3-203ENST00000425319 CNN3Q15417 329 aaKnown RBP9.98□□□□□ -0.81
HLA-DQB3-203ENST00000425319 SMIM21Q3B7S5 101 aa9.98□□□□□ -0.81
HLA-DQB3-203ENST00000425319 CEACAM21Q3KPI0 293 aa9.98□□□□□ -0.81
HLA-DQB3-203ENST00000425319 SPATS1Q496A3 300 aa9.98□□□□□ -0.81
HLA-DQB3-203ENST00000425319 LCN1P1Q5VSP4 162 aa9.98□□□□□ -0.81
HLA-DQB3-203ENST00000425319 KCTD18Q6PI47 426 aaPredicted RBP9.98□□□□□ -0.81
HLA-DQB3-203ENST00000425319 MKXQ8IYA7 352 aa9.98□□□□□ -0.81
HLA-DQB3-203ENST00000425319 PPP1R35Q8TAP8 253 aa9.98□□□□□ -0.81
HLA-DQB3-203ENST00000425319 RORBQ92753 470 aa9.98□□□□□ -0.81
HLA-DQB3-203ENST00000425319 DPF1Q92782 380 aa9.98□□□□□ -0.81
HLA-DQB3-203ENST00000425319 AJUBAQ96IF1 538 aa9.98□□□□□ -0.81
HLA-DQB3-203ENST00000425319 AKR1E2Q96JD6 320 aa9.98□□□□□ -0.81
HLA-DQB3-203ENST00000425319 DDOQ99489 341 aa9.98□□□□□ -0.81
HLA-DQB3-203ENST00000425319 OCSTAMPQ9BR26 566 aa9.98□□□□□ -0.81
HLA-DQB3-203ENST00000425319 GPR61Q9BZJ8 451 aa9.98□□□□□ -0.81
HLA-DQB3-203ENST00000425319 YY1AP1Q9H869 796 aa9.98□□□□□ -0.81
HLA-DQB3-203ENST00000425319 POLDIP2Q9Y2S7 368 aa9.98□□□□□ -0.81
HLA-DQB3-203ENST00000425319 TBL2Q9Y4P3 447 aaKnown RBP9.98□□□□□ -0.81
HLA-DQB3-203ENST00000425319 PRR23D1E9PI22 279 aaPredicted RBP9.97□□□□□ -0.81
HLA-DQB3-203ENST00000425319 H3BN98 237 aa9.97□□□□□ -0.81
HLA-DQB3-203ENST00000425319 FCN3O75636 299 aa9.97□□□□□ -0.81
HLA-DQB3-203ENST00000425319 PF4P02776 101 aa9.97□□□□□ -0.81
HLA-DQB3-203ENST00000425319 PRR23D2P0DMB1 279 aaPredicted RBP9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms