RNA–Protein interactions for RNA: ENST00000424964.6

TMEM248-204, Transcript of transmembrane protein 248, humanhuman

TSL 4

Gene TMEM248, Length 536 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-204ENST00000424964 CCDC58Q4VC31 144 aa12.47□□□□□ -0.41
TMEM248-204ENST00000424964 RBM48Q5RL73 367 aaKnown RBP12.47□□□□□ -0.41
TMEM248-204ENST00000424964 FAM201AQ5SY85 155 aa12.47□□□□□ -0.41
TMEM248-204ENST00000424964 XAF1Q6GPH4 301 aa12.47□□□□□ -0.41
TMEM248-204ENST00000424964 OR10AC1Q8NH08 325 aa12.47□□□□□ -0.41
TMEM248-204ENST00000424964 SGCDQ92629 289 aa12.47□□□□□ -0.41
TMEM248-204ENST00000424964 RPL3LQ92901 407 aaKnown RBP12.47□□□□□ -0.41
TMEM248-204ENST00000424964 FGGYQ96C11 551 aa12.47□□□□□ -0.41
TMEM248-204ENST00000424964 PDCD1LG2Q9BQ51 273 aa12.47□□□□□ -0.41
TMEM248-204ENST00000424964 FGF23Q9GZV9 251 aaPredicted RBP12.47□□□□□ -0.41
TMEM248-204ENST00000424964 RASSF4Q9H2L5 321 aa12.47□□□□□ -0.41
TMEM248-204ENST00000424964 TRIM36Q9NQ86 728 aa12.47□□□□□ -0.41
TMEM248-204ENST00000424964 PAK1IP1Q9NWT1 392 aaPredicted RBP12.47□□□□□ -0.41
TMEM248-204ENST00000424964 UBAP1Q9NZ09 502 aa12.47□□□□□ -0.41
TMEM248-204ENST00000424964 ERVK-18Q9QC07 812 aa12.47□□□□□ -0.41
TMEM248-204ENST00000424964 PPIAL4EA0A075B759 164 aa12.46□□□□□ -0.41
TMEM248-204ENST00000424964 ANKRD61A6NGH8 418 aa12.46□□□□□ -0.41
TMEM248-204ENST00000424964 OR5B21A6NL26 309 aa12.46□□□□□ -0.41
TMEM248-204ENST00000424964 PPIAL4DF5H284 164 aa12.46□□□□□ -0.41
TMEM248-204ENST00000424964 OGG1O15527 345 aa12.46□□□□□ -0.41
TMEM248-204ENST00000424964 DENRO43583 198 aaKnown RBP12.46□□□□□ -0.41
TMEM248-204ENST00000424964 PPIAL4FP0DN26 164 aa12.46□□□□□ -0.41
TMEM248-204ENST00000424964 IGHV4-31P0DP07 118 aa12.46□□□□□ -0.41
TMEM248-204ENST00000424964 CRHBPP24387 322 aa12.46□□□□□ -0.41
TMEM248-204ENST00000424964 IL2RGP31785 369 aa12.46□□□□□ -0.41
TMEM248-204ENST00000424964 GZMKP49863 264 aa12.46□□□□□ -0.41
TMEM248-204ENST00000424964 WNT4P56705 351 aa12.46□□□□□ -0.41
TMEM248-204ENST00000424964 SLC35A2P78381 396 aa12.46□□□□□ -0.41
TMEM248-204ENST00000424964 CDK5R1Q15078 307 aa12.46□□□□□ -0.41
TMEM248-204ENST00000424964 ZMYND11Q15326 602 aa12.46□□□□□ -0.41
TMEM248-204ENST00000424964 TMEM42Q69YG0 159 aa12.46□□□□□ -0.41
TMEM248-204ENST00000424964 CYB5R2Q6BCY4 276 aa12.46□□□□□ -0.41
TMEM248-204ENST00000424964 Q71RC1 249 aaPredicted RBP12.46□□□□□ -0.41
TMEM248-204ENST00000424964 LRRC28Q86X40 367 aaPredicted RBP12.46□□□□□ -0.41
TMEM248-204ENST00000424964 C11orf53Q8IXP5 236 aa12.46□□□□□ -0.41
TMEM248-204ENST00000424964 NANOGP1Q8N7R0 232 aa12.46□□□□□ -0.41
TMEM248-204ENST00000424964 ZFP41Q8N8Y5 198 aa12.46□□□□□ -0.41
TMEM248-204ENST00000424964 DEFB108BQ8NET1 73 aa12.46□□□□□ -0.41
TMEM248-204ENST00000424964 OR51A4Q8NGJ6 313 aa12.46□□□□□ -0.41
TMEM248-204ENST00000424964 C10orf35Q96D05 121 aa12.46□□□□□ -0.41
TMEM248-204ENST00000424964 ADAT3Q96EY9 351 aaPredicted RBP12.46□□□□□ -0.41
TMEM248-204ENST00000424964 CCDC90BQ9GZT6 254 aa12.46□□□□□ -0.41
TMEM248-204ENST00000424964 DUSP21Q9H596 190 aa12.46□□□□□ -0.41
TMEM248-204ENST00000424964 METTL17Q9H7H0 456 aaPredicted RBP12.46□□□□□ -0.41
TMEM248-204ENST00000424964 PCDHB10Q9UN67 800 aa12.46□□□□□ -0.41
TMEM248-204ENST00000424964 SLC7A11Q9UPY5 501 aa12.46□□□□□ -0.41
TMEM248-204ENST00000424964 PPIAL4AQ9Y536 164 aa12.46□□□□□ -0.41
TMEM248-204ENST00000424964 CDIPTO14735 213 aa12.45□□□□□ -0.42
TMEM248-204ENST00000424964 RGS10O43665 173 aa12.45□□□□□ -0.42
TMEM248-204ENST00000424964 GATBO75879 557 aaKnown RBP12.45□□□□□ -0.42
TMEM248-204ENST00000424964 LALBAP00709 142 aa12.45□□□□□ -0.42
TMEM248-204ENST00000424964 EEF1B2P24534 225 aaKnown RBP12.45□□□□□ -0.42
TMEM248-204ENST00000424964 CD80P33681 288 aa12.45□□□□□ -0.42
TMEM248-204ENST00000424964 MDH2P40926 338 aaKnown RBP12.45□□□□□ -0.42
TMEM248-204ENST00000424964 TAS2R43P59537 309 aa12.45□□□□□ -0.42
TMEM248-204ENST00000424964 LMO4P61968 165 aa12.45□□□□□ -0.42
TMEM248-204ENST00000424964 FAM76BQ5HYJ3 339 aa12.45□□□□□ -0.42
TMEM248-204ENST00000424964 SPICQ8N5J4 248 aa12.45□□□□□ -0.42
TMEM248-204ENST00000424964 SCCPDHQ8NBX0 429 aa12.45□□□□□ -0.42
TMEM248-204ENST00000424964 ZNF485Q8NCK3 441 aa12.45□□□□□ -0.42
TMEM248-204ENST00000424964 C19orf18Q8NEA5 215 aa12.45□□□□□ -0.42
TMEM248-204ENST00000424964 TRMT10AQ8TBZ6 339 aaKnown RBP12.45□□□□□ -0.42
TMEM248-204ENST00000424964 NPRL2Q8WTW4 380 aa12.45□□□□□ -0.42
TMEM248-204ENST00000424964 LRRC29Q8WV35 223 aa12.45□□□□□ -0.42
TMEM248-204ENST00000424964 TSEN15Q8WW01 171 aaKnown RBP12.45□□□□□ -0.42
TMEM248-204ENST00000424964 PP6455Q8WZ26 134 aa12.45□□□□□ -0.42
TMEM248-204ENST00000424964 RAB39BQ96DA2 213 aa12.45□□□□□ -0.42
TMEM248-204ENST00000424964 MND1Q9BWT6 205 aa12.45□□□□□ -0.42
TMEM248-204ENST00000424964 CDCA4Q9BXL8 241 aa12.45□□□□□ -0.42
TMEM248-204ENST00000424964 ZNF665Q9H7R5 613 aa12.45□□□□□ -0.42
TMEM248-204ENST00000424964 BLOC1S6Q9UL45 172 aa12.45□□□□□ -0.42
TMEM248-204ENST00000424964 DHDHQ9UQ10 334 aa12.45□□□□□ -0.42
TMEM248-204ENST00000424964 SIRT4Q9Y6E7 314 aaPredicted RBP12.45□□□□□ -0.42
TMEM248-204ENST00000424964 PNMA8CA0A1B0GUJ8 204 aa12.44□□□□□ -0.42
TMEM248-204ENST00000424964 FAM230AA0A1W2PPH8 454 aa12.44□□□□□ -0.42
TMEM248-204ENST00000424964 OCM2P0CE71 109 aa12.44□□□□□ -0.42
TMEM248-204ENST00000424964 OCMP0CE72 109 aaPredicted RBP12.44□□□□□ -0.42
TMEM248-204ENST00000424964 HOXA4Q00056 320 aaPredicted RBP12.44□□□□□ -0.42
TMEM248-204ENST00000424964 UBE2V2Q15819 145 aa12.44□□□□□ -0.42
TMEM248-204ENST00000424964 TMEM155Q4W5P6 130 aa12.44□□□□□ -0.42
TMEM248-204ENST00000424964 RNLSQ5VYX0 342 aa12.44□□□□□ -0.42
TMEM248-204ENST00000424964 SFRP4Q6FHJ7 346 aaPredicted RBP12.44□□□□□ -0.42
TMEM248-204ENST00000424964 WDR82Q6UXN9 313 aa12.44□□□□□ -0.42
TMEM248-204ENST00000424964 MUC20Q8N307 709 aaPredicted RBP12.44□□□□□ -0.42
TMEM248-204ENST00000424964 MSI2Q96DH6 328 aaKnown RBP12.44□□□□□ -0.42
TMEM248-204ENST00000424964 SMIM19Q96E16 107 aa12.44□□□□□ -0.42
TMEM248-204ENST00000424964 TECTBQ96PL2 329 aa12.44□□□□□ -0.42
TMEM248-204ENST00000424964 CHST5Q9GZS9 411 aa12.44□□□□□ -0.42
TMEM248-204ENST00000424964 TLNRD1Q9H1K6 362 aa12.44□□□□□ -0.42
TMEM248-204ENST00000424964 OR51I2Q9H344 312 aa12.44□□□□□ -0.42
TMEM248-204ENST00000424964 TMEM165Q9HC07 324 aa12.44□□□□□ -0.42
TMEM248-204ENST00000424964 C3orf80F5H4A9 247 aa12.43□□□□□ -0.42
TMEM248-204ENST00000424964 LGALS8O00214 317 aa12.43□□□□□ -0.42
TMEM248-204ENST00000424964 CD5LO43866 347 aa12.43□□□□□ -0.42
TMEM248-204ENST00000424964 IGHV2-5P01817 119 aa12.43□□□□□ -0.42
TMEM248-204ENST00000424964 MT-ND2P03891 347 aa12.43□□□□□ -0.42
TMEM248-204ENST00000424964 ATF1P18846 271 aa12.43□□□□□ -0.42
TMEM248-204ENST00000424964 SOX2P48431 317 aa12.43□□□□□ -0.42
TMEM248-204ENST00000424964 GMFBP60983 142 aa12.43□□□□□ -0.42
TMEM248-204ENST00000424964 KRTAP1-1Q07627 177 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 139.6 ms