RNA–Protein interactions for RNA: ENST00000424478.5

PRPF39-202, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,174 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-202ENST00000424478 UNQ6126/PRO20091Q6UXV3 157 aa11.44□□□□□ -0.58
PRPF39-202ENST00000424478 C19orf18Q8NEA5 215 aa11.44□□□□□ -0.58
PRPF39-202ENST00000424478 OR4D6Q8NGJ1 314 aa11.44□□□□□ -0.58
PRPF39-202ENST00000424478 DCAF16Q9NXF7 216 aa11.44□□□□□ -0.58
PRPF39-202ENST00000424478 PLEKHB1Q9UF11 243 aaPredicted RBP11.44□□□□□ -0.58
PRPF39-202ENST00000424478 A0A0G2JK05 382 aa11.43□□□□□ -0.58
PRPF39-202ENST00000424478 A0A1W2PP11 408 aa11.43□□□□□ -0.58
PRPF39-202ENST00000424478 LOC390937A0A1W2PQ73 354 aa11.43□□□□□ -0.58
PRPF39-202ENST00000424478 PLSCR5A0PG75 271 aa11.43□□□□□ -0.58
PRPF39-202ENST00000424478 NDUFS7O75251 213 aa11.43□□□□□ -0.58
PRPF39-202ENST00000424478 ZNF205O95201 554 aa11.43□□□□□ -0.58
PRPF39-202ENST00000424478 RAB3BP20337 219 aa11.43□□□□□ -0.58
PRPF39-202ENST00000424478 CFL1P23528 166 aaKnown RBP11.43□□□□□ -0.58
PRPF39-202ENST00000424478 CDKN1AP38936 164 aa11.43□□□□□ -0.58
PRPF39-202ENST00000424478 MAB21L1Q13394 359 aa11.43□□□□□ -0.58
PRPF39-202ENST00000424478 IDNKQ5T6J7 187 aa11.43□□□□□ -0.58
PRPF39-202ENST00000424478 ZDHHC23Q8IYP9 409 aa11.43□□□□□ -0.58
PRPF39-202ENST00000424478 ZNF295-AS1Q8N0V1 137 aa11.43□□□□□ -0.58
PRPF39-202ENST00000424478 PSMG3-AS1Q96PY0 264 aa11.43□□□□□ -0.58
PRPF39-202ENST00000424478 GPER1Q99527 375 aa11.43□□□□□ -0.58
PRPF39-202ENST00000424478 VRK1Q99986 396 aaPredicted RBP11.43□□□□□ -0.58
PRPF39-202ENST00000424478 METTL17Q9H7H0 456 aaPredicted RBP11.43□□□□□ -0.58
PRPF39-202ENST00000424478 TMEM100Q9NV29 134 aa11.43□□□□□ -0.58
PRPF39-202ENST00000424478 CACNG2Q9Y698 323 aa11.43□□□□□ -0.58
PRPF39-202ENST00000424478 PMF1-BGLAPU3KQ54 211 aa11.43□□□□□ -0.58
PRPF39-202ENST00000424478 CCDC168Q8NDH2 2452 aa11.43□□□□□ -0.58
PRPF39-202ENST00000424478 IGLV3-9A0A075B6K5 115 aa11.43□□□□□ -0.58
PRPF39-202ENST00000424478 CTAG2O75638 210 aa11.43□□□□□ -0.58
PRPF39-202ENST00000424478 ATF1P18846 271 aa11.43□□□□□ -0.58
PRPF39-202ENST00000424478 KITLGP21583 273 aa11.43□□□□□ -0.58
PRPF39-202ENST00000424478 MTCP1P56278 107 aa11.43□□□□□ -0.58
PRPF39-202ENST00000424478 ZNF420Q8TAQ5 688 aaPredicted RBP11.43□□□□□ -0.58
PRPF39-202ENST00000424478 FBXW5Q969U6 566 aa11.43□□□□□ -0.58
PRPF39-202ENST00000424478 FAM46BQ96A09 425 aa11.43□□□□□ -0.58
PRPF39-202ENST00000424478 SEH1LQ96EE3 360 aa11.43□□□□□ -0.58
PRPF39-202ENST00000424478 ELMOD3Q96FG2 381 aa11.43□□□□□ -0.58
PRPF39-202ENST00000424478 CNTD2Q9H8S5 307 aa11.43□□□□□ -0.58
PRPF39-202ENST00000424478 PLGRKTQ9HBL7 147 aa11.43□□□□□ -0.58
PRPF39-202ENST00000424478 NAV2Q8IVL1 2488 aa11.43□□□□□ -0.58
PRPF39-202ENST00000424478 LYNX1G3V0Z9 82 aa11.42□□□□□ -0.58
PRPF39-202ENST00000424478 RHBDL1O75783 438 aa11.42□□□□□ -0.58
PRPF39-202ENST00000424478 LYNX1P0DP58 116 aa11.42□□□□□ -0.58
PRPF39-202ENST00000424478 PRF1P14222 555 aa11.42□□□□□ -0.58
PRPF39-202ENST00000424478 BDKRB2P30411 391 aa11.42□□□□□ -0.58
PRPF39-202ENST00000424478 APOBEC3AP31941 199 aaPredicted RBP11.42□□□□□ -0.58
PRPF39-202ENST00000424478 ZNF81P51508 661 aa11.42□□□□□ -0.58
PRPF39-202ENST00000424478 SNU13P55769 128 aaKnown RBP11.42□□□□□ -0.58
PRPF39-202ENST00000424478 RPS23P62266 143 aaKnown RBP11.42□□□□□ -0.58
PRPF39-202ENST00000424478 TMEM42Q69YG0 159 aa11.42□□□□□ -0.58
PRPF39-202ENST00000424478 Q6ZSR3 168 aa11.42□□□□□ -0.58
PRPF39-202ENST00000424478 BATF3Q9NR55 127 aa11.42□□□□□ -0.58
PRPF39-202ENST00000424478 ZNF391Q9UJN7 358 aa11.42□□□□□ -0.58
PRPF39-202ENST00000424478 CDC14BO60729 498 aa11.42□□□□□ -0.58
PRPF39-202ENST00000424478 CD8AP01732 235 aa11.42□□□□□ -0.58
PRPF39-202ENST00000424478 TFF1P04155 84 aa11.42□□□□□ -0.58
PRPF39-202ENST00000424478 SNRPBP14678 240 aaKnown RBP11.42□□□□□ -0.58
PRPF39-202ENST00000424478 HAAOP46952 286 aa11.42□□□□□ -0.58
PRPF39-202ENST00000424478 KISS1Q15726 138 aa11.42□□□□□ -0.58
PRPF39-202ENST00000424478 DYNC2LI1Q8TCX1 351 aa11.42□□□□□ -0.58
PRPF39-202ENST00000424478 ZNF442Q9H7R0 627 aa11.42□□□□□ -0.58
PRPF39-202ENST00000424478 DYNLRB1Q9NP97 96 aa11.42□□□□□ -0.58
PRPF39-202ENST00000424478 MED13LQ71F56 2210 aa11.42□□□□□ -0.58
PRPF39-202ENST00000424478 F8VVB4 439 aa11.42□□□□□ -0.58
PRPF39-202ENST00000424478 F8VWA3 439 aa11.42□□□□□ -0.58
PRPF39-202ENST00000424478 TPD52L2O43399 206 aaKnown RBP11.42□□□□□ -0.58
PRPF39-202ENST00000424478 SYNGR1O43759 233 aa11.42□□□□□ -0.58
PRPF39-202ENST00000424478 IGHV1-46P01743 117 aa11.42□□□□□ -0.58
PRPF39-202ENST00000424478 ZNF93P35789 620 aaPredicted RBP11.42□□□□□ -0.58
PRPF39-202ENST00000424478 USP43Q70EL4 1123 aa11.42□□□□□ -0.58
PRPF39-202ENST00000424478 CSNK2A3Q8NEV1 391 aa11.42□□□□□ -0.58
PRPF39-202ENST00000424478 PP6455Q8WZ26 134 aa11.42□□□□□ -0.58
PRPF39-202ENST00000424478 OR5P3Q8WZ94 311 aa11.42□□□□□ -0.58
PRPF39-202ENST00000424478 DHRS9Q9BPW9 319 aa11.42□□□□□ -0.58
PRPF39-202ENST00000424478 ELL3Q9HB65 397 aaPredicted RBP11.42□□□□□ -0.58
PRPF39-202ENST00000424478 TMEM138Q9NPI0 162 aa11.42□□□□□ -0.58
PRPF39-202ENST00000424478 J3QW42 95 aa11.41□□□□□ -0.58
PRPF39-202ENST00000424478 SLC22A1O15245 554 aa11.41□□□□□ -0.58
PRPF39-202ENST00000424478 RAF1P04049 648 aa11.41□□□□□ -0.58
PRPF39-202ENST00000424478 TLE4Q04727 773 aa11.41□□□□□ -0.58
PRPF39-202ENST00000424478 FAM201AQ5SY85 155 aa11.41□□□□□ -0.58
PRPF39-202ENST00000424478 ZNF529Q6P280 563 aa11.41□□□□□ -0.58
PRPF39-202ENST00000424478 SFXN4Q6P4A7 337 aa11.41□□□□□ -0.58
PRPF39-202ENST00000424478 HAGHLQ6PII5 290 aaPredicted RBP11.41□□□□□ -0.58
PRPF39-202ENST00000424478 GDPGP1Q6ZNW5 385 aa11.41□□□□□ -0.58
PRPF39-202ENST00000424478 BORCS8Q96FH0 119 aa11.41□□□□□ -0.58
PRPF39-202ENST00000424478 OR2V2Q96R30 315 aa11.41□□□□□ -0.58
PRPF39-202ENST00000424478 SLITRK2Q9H156 845 aa11.41□□□□□ -0.58
PRPF39-202ENST00000424478 MRPL15Q9P015 296 aaKnown RBP11.41□□□□□ -0.58
PRPF39-202ENST00000424478 M0R233 179 aa11.41□□□□□ -0.58
PRPF39-202ENST00000424478 CDIPTO14735 213 aa11.41□□□□□ -0.58
PRPF39-202ENST00000424478 HS3ST1O14792 307 aa11.41□□□□□ -0.58
PRPF39-202ENST00000424478 CST4P01036 141 aa11.41□□□□□ -0.58
PRPF39-202ENST00000424478 ZNF12P17014 697 aa11.41□□□□□ -0.58
PRPF39-202ENST00000424478 MTNR1BP49286 362 aa11.41□□□□□ -0.58
PRPF39-202ENST00000424478 SELENOVP59797 346 aa11.41□□□□□ -0.58
PRPF39-202ENST00000424478 DAZAP2Q15038 168 aaPredicted RBP11.41□□□□□ -0.58
PRPF39-202ENST00000424478 PDCD1Q15116 288 aa11.41□□□□□ -0.58
PRPF39-202ENST00000424478 SSX8Q7RTT4 187 aa11.41□□□□□ -0.58
PRPF39-202ENST00000424478 BOLLQ8N9W6 283 aaKnown RBP11.41□□□□□ -0.58
PRPF39-202ENST00000424478 ITLN1Q8WWA0 313 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms