RNA–Protein interactions for RNA: ENST00000423982.6

MSH5-206, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 2,706 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-206ENST00000423982 C1orf147Q96MC9 270 aaPredicted RBP12.64□□□□□ -0.39
MSH5-206ENST00000423982 ZNF319Q9P2F9 582 aa12.64□□□□□ -0.39
MSH5-206ENST00000423982 C5orf52A6NGY3 159 aa12.64□□□□□ -0.39
MSH5-206ENST00000423982 TAS2R31P59538 309 aa12.64□□□□□ -0.39
MSH5-206ENST00000423982 CDCP2Q5VXM1 449 aa12.64□□□□□ -0.39
MSH5-206ENST00000423982 BTNL8Q6UX41 500 aa12.64□□□□□ -0.39
MSH5-206ENST00000423982 NUP54Q7Z3B4 507 aa12.64□□□□□ -0.39
MSH5-206ENST00000423982 POC1AQ8NBT0 407 aa12.64□□□□□ -0.39
MSH5-206ENST00000423982 RNF133Q8WVZ7 376 aa12.64□□□□□ -0.39
MSH5-206ENST00000423982 ASB10Q8WXI3 467 aa12.64□□□□□ -0.39
MSH5-206ENST00000423982 RAB18Q9NP72 206 aa12.64□□□□□ -0.39
MSH5-206ENST00000423982 CACFD1Q9UGQ2 172 aa12.64□□□□□ -0.39
MSH5-206ENST00000423982 MRPS28Q9Y2Q9 187 aaKnown RBP12.64□□□□□ -0.39
MSH5-206ENST00000423982 FAM186AA6NE01 2351 aa12.63□□□□□ -0.39
MSH5-206ENST00000423982 ARPC4-TTLL3A0A0A6YYG9 625 aa12.63□□□□□ -0.39
MSH5-206ENST00000423982 hCG_1809904A0A1W2PP81 198 aa12.63□□□□□ -0.39
MSH5-206ENST00000423982 A0A1W2PR64 198 aa12.63□□□□□ -0.39
MSH5-206ENST00000423982 A0A1W2PRV1 198 aa12.63□□□□□ -0.39
MSH5-206ENST00000423982 NPIPA5E9PKD4 350 aa12.63□□□□□ -0.39
MSH5-206ENST00000423982 HKR1P10072 659 aa12.63□□□□□ -0.39
MSH5-206ENST00000423982 FHITP49789 147 aa12.63□□□□□ -0.39
MSH5-206ENST00000423982 FABP9Q0Z7S8 132 aa12.63□□□□□ -0.39
MSH5-206ENST00000423982 WDR74Q6RFH5 385 aaPredicted RBP12.63□□□□□ -0.39
MSH5-206ENST00000423982 SKA3Q8IX90 412 aa12.63□□□□□ -0.39
MSH5-206ENST00000423982 NPRL2Q8WTW4 380 aa12.63□□□□□ -0.39
MSH5-206ENST00000423982 BSCL2Q96G97 398 aaPredicted RBP12.63□□□□□ -0.39
MSH5-206ENST00000423982 OR6C1Q96RD1 312 aa12.63□□□□□ -0.39
MSH5-206ENST00000423982 SMCO4Q9NRQ5 59 aa12.63□□□□□ -0.39
MSH5-206ENST00000423982 NPIPA1Q9UND3 350 aa12.63□□□□□ -0.39
MSH5-206ENST00000423982 AMDHD2Q9Y303 409 aa12.63□□□□□ -0.39
MSH5-206ENST00000423982 WIF1Q9Y5W5 379 aa12.63□□□□□ -0.39
MSH5-206ENST00000423982 A0A1W2PPH5 198 aa12.63□□□□□ -0.39
MSH5-206ENST00000423982 NUDT19A8MXV4 375 aa12.63□□□□□ -0.39
MSH5-206ENST00000423982 ALG1L2C9J202 215 aa12.63□□□□□ -0.39
MSH5-206ENST00000423982 FTCDNL1E5RQL4 147 aa12.63□□□□□ -0.39
MSH5-206ENST00000423982 TSPAN2O60636 221 aa12.63□□□□□ -0.39
MSH5-206ENST00000423982 RD3LP0DJH9 198 aa12.63□□□□□ -0.39
MSH5-206ENST00000423982 HIST1H1DP16402 221 aaKnown RBP12.63□□□□□ -0.39
MSH5-206ENST00000423982 GABRA4P48169 554 aa12.63□□□□□ -0.39
MSH5-206ENST00000423982 MMP16P51512 607 aa12.63□□□□□ -0.39
MSH5-206ENST00000423982 ARFRP1Q13795 201 aa12.63□□□□□ -0.39
MSH5-206ENST00000423982 KRBOX4Q5JUW0 171 aa12.63□□□□□ -0.39
MSH5-206ENST00000423982 LCN10Q6JVE6 187 aa12.63□□□□□ -0.39
MSH5-206ENST00000423982 SHISA6Q6ZSJ9 500 aa12.63□□□□□ -0.39
MSH5-206ENST00000423982 LOXL4Q96JB6 756 aa12.63□□□□□ -0.39
MSH5-206ENST00000423982 FAM71F1Q96KD3 344 aaPredicted RBP12.63□□□□□ -0.39
MSH5-206ENST00000423982 PARD6AQ9NPB6 346 aa12.63□□□□□ -0.39
MSH5-206ENST00000423982 VDAC3Q9Y277 283 aa12.63□□□□□ -0.39
MSH5-206ENST00000423982 A0A1B0GV50 99 aa12.62□□□□□ -0.39
MSH5-206ENST00000423982 C5orf63A6NC05 138 aa12.62□□□□□ -0.39
MSH5-206ENST00000423982 H3BML4 177 aa12.62□□□□□ -0.39
MSH5-206ENST00000423982 TXNL1O43396 289 aa12.62□□□□□ -0.39
MSH5-206ENST00000423982 CDC14BO60729 498 aa12.62□□□□□ -0.39
MSH5-206ENST00000423982 CRTAPO75718 401 aaPredicted RBP12.62□□□□□ -0.39
MSH5-206ENST00000423982 ZNF205O95201 554 aa12.62□□□□□ -0.39
MSH5-206ENST00000423982 TIAF1O95411 115 aa12.62□□□□□ -0.39
MSH5-206ENST00000423982 S100A6P06703 90 aa12.62□□□□□ -0.39
MSH5-206ENST00000423982 LYL1P12980 280 aa12.62□□□□□ -0.39
MSH5-206ENST00000423982 RPS2P15880 293 aaKnown RBP12.62□□□□□ -0.39
MSH5-206ENST00000423982 AMY2BP19961 511 aa12.62□□□□□ -0.39
MSH5-206ENST00000423982 CDAP32320 146 aa12.62□□□□□ -0.39
MSH5-206ENST00000423982 OR5AS1Q8N127 324 aa12.62□□□□□ -0.39
MSH5-206ENST00000423982 LINC00469Q8N7U9 141 aa12.62□□□□□ -0.39
MSH5-206ENST00000423982 OR5D14Q8NGL3 314 aa12.62□□□□□ -0.39
MSH5-206ENST00000423982 OR5H2Q8NGV7 314 aa12.62□□□□□ -0.39
MSH5-206ENST00000423982 SAT2Q96F10 170 aaPredicted RBP12.62□□□□□ -0.39
MSH5-206ENST00000423982 C2orf50Q96LR7 162 aa12.62□□□□□ -0.39
MSH5-206ENST00000423982 SPSB2Q99619 263 aa12.62□□□□□ -0.39
MSH5-206ENST00000423982 RNF122Q9H9V4 155 aa12.62□□□□□ -0.39
MSH5-206ENST00000423982 GHRLQ9UBU3 117 aa12.62□□□□□ -0.39
MSH5-206ENST00000423982 C1orf196B1AJZ1 125 aa12.62□□□□□ -0.39
MSH5-206ENST00000423982 NME2P1O60361 137 aa12.62□□□□□ -0.39
MSH5-206ENST00000423982 ZNF708P17019 499 aa12.62□□□□□ -0.39
MSH5-206ENST00000423982 MFAP5Q13361 173 aa12.62□□□□□ -0.39
MSH5-206ENST00000423982 RSPO4Q2I0M5 234 aaPredicted RBP12.62□□□□□ -0.39
MSH5-206ENST00000423982 AWAT1Q58HT5 328 aa12.62□□□□□ -0.39
MSH5-206ENST00000423982 C1QL2Q7Z5L3 287 aa12.62□□□□□ -0.39
MSH5-206ENST00000423982 ABHD12BQ7Z5M8 362 aaPredicted RBP12.62□□□□□ -0.39
MSH5-206ENST00000423982 THAP3Q8WTV1 239 aaPredicted RBP12.62□□□□□ -0.39
MSH5-206ENST00000423982 SLC25A43Q8WUT9 341 aaPredicted RBP12.62□□□□□ -0.39
MSH5-206ENST00000423982 KCNK17Q96T54 332 aa12.62□□□□□ -0.39
MSH5-206ENST00000423982 RAB33BQ9H082 229 aa12.62□□□□□ -0.39
MSH5-206ENST00000423982 ZNF304Q9HCX3 659 aa12.62□□□□□ -0.39
MSH5-206ENST00000423982 OCIAD1Q9NX40 245 aa12.62□□□□□ -0.39
MSH5-206ENST00000423982 FBXL17Q9UF56 701 aa12.62□□□□□ -0.39
MSH5-206ENST00000423982 LOC400499M0QZD8 3231 aa12.62□□□□□ -0.39
MSH5-206ENST00000423982 IGKV1D-8A0A087WSZ0 117 aa12.61□□□□□ -0.39
MSH5-206ENST00000423982 IGHV3-20A0A0C4DH32 117 aa12.61□□□□□ -0.39
MSH5-206ENST00000423982 IGHMP01871 453 aa12.61□□□□□ -0.39
MSH5-206ENST00000423982 ARG1P05089 322 aa12.61□□□□□ -0.39
MSH5-206ENST00000423982 ZNF20P17024 532 aa12.61□□□□□ -0.39
MSH5-206ENST00000423982 IL15RAQ13261 267 aa12.61□□□□□ -0.39
MSH5-206ENST00000423982 HLA-DQA1Q5Y7H0 255 aa12.61□□□□□ -0.39
MSH5-206ENST00000423982 ZNF248Q8NDW4 579 aa12.61□□□□□ -0.39
MSH5-206ENST00000423982 OR6S1Q8NH40 331 aa12.61□□□□□ -0.39
MSH5-206ENST00000423982 CDC6Q99741 560 aa12.61□□□□□ -0.39
MSH5-206ENST00000423982 EHFQ9NZC4 300 aa12.61□□□□□ -0.39
MSH5-206ENST00000423982 AHCTF1Q8WYP5 2266 aa12.61□□□□□ -0.39
MSH5-206ENST00000423982 C1QL1O75973 258 aa12.61□□□□□ -0.39
MSH5-206ENST00000423982 HCKP08631 526 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms