RNA–Protein interactions for RNA: ENST00000423635.5

CHCHD3-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 1 (best)

Gene CHCHD3, Length 1,310 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-202ENST00000423635 C19orf12Q9NSK7 152 aa13.47□□□□□ -0.25
CHCHD3-202ENST00000423635 A0A1W2PPH5 198 aa13.46□□□□□ -0.25
CHCHD3-202ENST00000423635 GLRA1P23415 457 aa13.46□□□□□ -0.25
CHCHD3-202ENST00000423635 CX3CR1P49238 355 aa13.46□□□□□ -0.25
CHCHD3-202ENST00000423635 ENTPD1P49961 510 aa13.46□□□□□ -0.25
CHCHD3-202ENST00000423635 SLC25A1P53007 311 aa13.46□□□□□ -0.25
CHCHD3-202ENST00000423635 TMEM200BQ69YZ2 307 aa13.46□□□□□ -0.25
CHCHD3-202ENST00000423635 TMEM219Q86XT9 240 aa13.46□□□□□ -0.25
CHCHD3-202ENST00000423635 TMEM185AQ8NFB2 350 aa13.46□□□□□ -0.25
CHCHD3-202ENST00000423635 RPS4Y2Q8TD47 263 aa13.46□□□□□ -0.25
CHCHD3-202ENST00000423635 MALSU1Q96EH3 234 aa13.46□□□□□ -0.25
CHCHD3-202ENST00000423635 MUC13Q9H3R2 512 aa13.46□□□□□ -0.25
CHCHD3-202ENST00000423635 INPP5EQ9NRR6 644 aa13.46□□□□□ -0.25
CHCHD3-202ENST00000423635 ZNF319Q9P2F9 582 aa13.46□□□□□ -0.25
CHCHD3-202ENST00000423635 hCG_1809904A0A1W2PP81 198 aa13.45□□□□□ -0.26
CHCHD3-202ENST00000423635 A0A1W2PPE2 198 aa13.45□□□□□ -0.26
CHCHD3-202ENST00000423635 A0A1W2PR64 198 aa13.45□□□□□ -0.26
CHCHD3-202ENST00000423635 A0A1W2PRV1 198 aa13.45□□□□□ -0.26
CHCHD3-202ENST00000423635 ZNF593O00488 134 aaPredicted RBP13.45□□□□□ -0.26
CHCHD3-202ENST00000423635 CST4P01036 141 aa13.45□□□□□ -0.26
CHCHD3-202ENST00000423635 APOC1P02654 83 aa13.45□□□□□ -0.26
CHCHD3-202ENST00000423635 PF4P02776 101 aa13.45□□□□□ -0.26
CHCHD3-202ENST00000423635 ALDOBP05062 364 aa13.45□□□□□ -0.26
CHCHD3-202ENST00000423635 ANXA2P07355 339 aaKnown RBP13.45□□□□□ -0.26
CHCHD3-202ENST00000423635 SPARCP09486 303 aa13.45□□□□□ -0.26
CHCHD3-202ENST00000423635 VDAC2P45880 294 aaPredicted RBP13.45□□□□□ -0.26
CHCHD3-202ENST00000423635 GSSP48637 474 aa13.45□□□□□ -0.26
CHCHD3-202ENST00000423635 DYNLT3P51808 116 aa13.45□□□□□ -0.26
CHCHD3-202ENST00000423635 TCTEX1D4Q5JR98 221 aa13.45□□□□□ -0.26
CHCHD3-202ENST00000423635 OR51L1Q8NGJ5 315 aa13.45□□□□□ -0.26
CHCHD3-202ENST00000423635 RNF170Q96K19 258 aa13.45□□□□□ -0.26
CHCHD3-202ENST00000423635 FGF23Q9GZV9 251 aaPredicted RBP13.45□□□□□ -0.26
CHCHD3-202ENST00000423635 RGCCQ9H4X1 137 aa13.45□□□□□ -0.26
CHCHD3-202ENST00000423635 TBL2Q9Y4P3 447 aaKnown RBP13.45□□□□□ -0.26
CHCHD3-202ENST00000423635 TSSC4Q9Y5U2 329 aaPredicted RBP13.45□□□□□ -0.26
CHCHD3-202ENST00000423635 DYNC2H1Q8NCM8 4307 aaKnown RBP13.44□□□□□ -0.26
CHCHD3-202ENST00000423635 DHRS12A0PJE2 317 aa13.44□□□□□ -0.26
CHCHD3-202ENST00000423635 ZNF850A8MQ14 1090 aa13.44□□□□□ -0.26
CHCHD3-202ENST00000423635 F2RL2O00254 374 aa13.44□□□□□ -0.26
CHCHD3-202ENST00000423635 SYNGR1O43759 233 aa13.44□□□□□ -0.26
CHCHD3-202ENST00000423635 DIRAS1O95057 198 aa13.44□□□□□ -0.26
CHCHD3-202ENST00000423635 NHLRC4P0CG21 123 aaPredicted RBP13.44□□□□□ -0.26
CHCHD3-202ENST00000423635 COX7A1P24310 79 aa13.44□□□□□ -0.26
CHCHD3-202ENST00000423635 FMO3P31513 532 aa13.44□□□□□ -0.26
CHCHD3-202ENST00000423635 ERVFRD-1P60508 538 aa13.44□□□□□ -0.26
CHCHD3-202ENST00000423635 RPL31P62899 125 aaKnown RBP13.44□□□□□ -0.26
CHCHD3-202ENST00000423635 PRDX4Q13162 271 aa13.44□□□□□ -0.26
CHCHD3-202ENST00000423635 DCTN2Q13561 401 aaKnown RBP13.44□□□□□ -0.26
CHCHD3-202ENST00000423635 KRT72Q14CN4 511 aa13.44□□□□□ -0.26
CHCHD3-202ENST00000423635 FAM57BQ71RH2 274 aa13.44□□□□□ -0.26
CHCHD3-202ENST00000423635 ZNF511Q8NB15 262 aa13.44□□□□□ -0.26
CHCHD3-202ENST00000423635 FAM162AQ96A26 154 aa13.44□□□□□ -0.26
CHCHD3-202ENST00000423635 ABCB10Q9NRK6 738 aa13.44□□□□□ -0.26
CHCHD3-202ENST00000423635 USE1Q9NZ43 259 aa13.44□□□□□ -0.26
CHCHD3-202ENST00000423635 NME4O00746 187 aa13.43□□□□□ -0.26
CHCHD3-202ENST00000423635 HOXD3P31249 432 aaPredicted RBP13.43□□□□□ -0.26
CHCHD3-202ENST00000423635 SMIM11AP58511 58 aa13.43□□□□□ -0.26
CHCHD3-202ENST00000423635 TMEM95Q3KNT9 176 aa13.43□□□□□ -0.26
CHCHD3-202ENST00000423635 PLA1AQ53H76 456 aa13.43□□□□□ -0.26
CHCHD3-202ENST00000423635 ARSJQ5FYB0 599 aaPredicted RBP13.43□□□□□ -0.26
CHCHD3-202ENST00000423635 KRT74Q7RTS7 529 aa13.43□□□□□ -0.26
CHCHD3-202ENST00000423635 CALHM1Q8IU99 346 aa13.43□□□□□ -0.26
CHCHD3-202ENST00000423635 FAM86B1Q8N7N1 296 aa13.43□□□□□ -0.26
CHCHD3-202ENST00000423635 HPSE2Q8WWQ2 592 aa13.43□□□□□ -0.26
CHCHD3-202ENST00000423635 FOXRED1Q96CU9 486 aaPredicted RBP13.43□□□□□ -0.26
CHCHD3-202ENST00000423635 RCN3Q96D15 328 aa13.43□□□□□ -0.26
CHCHD3-202ENST00000423635 HOPXQ9BPY8 73 aaPredicted RBP13.43□□□□□ -0.26
CHCHD3-202ENST00000423635 GPR61Q9BZJ8 451 aa13.43□□□□□ -0.26
CHCHD3-202ENST00000423635 OR10A2Q9H208 303 aa13.43□□□□□ -0.26
CHCHD3-202ENST00000423635 YY1AP1Q9H869 796 aa13.43□□□□□ -0.26
CHCHD3-202ENST00000423635 SACSQ9NZJ4 4579 aa13.43□□□□□ -0.26
CHCHD3-202ENST00000423635 TCRBV4S1A1TA0A5B7 111 aa13.42□□□□□ -0.26
CHCHD3-202ENST00000423635 ODF3BA8MYP8 253 aa13.42□□□□□ -0.26
CHCHD3-202ENST00000423635 C3orf84H3BNL1 204 aa13.42□□□□□ -0.26
CHCHD3-202ENST00000423635 MTRF1O75570 445 aaKnown RBP13.42□□□□□ -0.26
CHCHD3-202ENST00000423635 GADD45GO95257 159 aa13.42□□□□□ -0.26
CHCHD3-202ENST00000423635 NCK1P16333 377 aa13.42□□□□□ -0.26
CHCHD3-202ENST00000423635 ACKR3P25106 362 aa13.42□□□□□ -0.26
CHCHD3-202ENST00000423635 HSD11B1P28845 292 aa13.42□□□□□ -0.26
CHCHD3-202ENST00000423635 ZNF121P58317 390 aaPredicted RBP13.42□□□□□ -0.26
CHCHD3-202ENST00000423635 TSPAN31Q12999 210 aa13.42□□□□□ -0.26
CHCHD3-202ENST00000423635 SSX2Q16385 188 aa13.42□□□□□ -0.26
CHCHD3-202ENST00000423635 LDLRAD2Q5SZI1 272 aa13.42□□□□□ -0.26
CHCHD3-202ENST00000423635 C8orf82Q6P1X6 216 aaPredicted RBP13.42□□□□□ -0.26
CHCHD3-202ENST00000423635 KCTD8Q6ZWB6 473 aa13.42□□□□□ -0.26
CHCHD3-202ENST00000423635 TIGD4Q8IY51 512 aa13.42□□□□□ -0.26
CHCHD3-202ENST00000423635 SLC37A3Q8NCC5 494 aa13.42□□□□□ -0.26
CHCHD3-202ENST00000423635 ZNF671Q8TAW3 534 aa13.42□□□□□ -0.26
CHCHD3-202ENST00000423635 RNF133Q8WVZ7 376 aa13.42□□□□□ -0.26
CHCHD3-202ENST00000423635 OR51I2Q9H344 312 aa13.42□□□□□ -0.26
CHCHD3-202ENST00000423635 DCAF13Q9NV06 445 aaKnown RBP13.42□□□□□ -0.26
CHCHD3-202ENST00000423635 RASL12Q9NYN1 266 aa13.42□□□□□ -0.26
CHCHD3-202ENST00000423635 C17orf98A8MV24 154 aa13.41□□□□□ -0.26
CHCHD3-202ENST00000423635 CCL3L1P16619 93 aa13.41□□□□□ -0.26
CHCHD3-202ENST00000423635 IFNGR2P38484 337 aa13.41□□□□□ -0.26
CHCHD3-202ENST00000423635 CAPZA1P52907 286 aa13.41□□□□□ -0.26
CHCHD3-202ENST00000423635 CCDC121Q6ZUS5 278 aa13.41□□□□□ -0.26
CHCHD3-202ENST00000423635 THAP5Q7Z6K1 395 aa13.41□□□□□ -0.26
CHCHD3-202ENST00000423635 CENPVQ7Z7K6 275 aaPredicted RBP13.41□□□□□ -0.26
CHCHD3-202ENST00000423635 ZNF561Q8N587 486 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms