RNA–Protein interactions for RNA: ENST00000422991.1

COL7A1-202, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-202ENST00000422991 PSMA1P25786 263 aaKnown RBP14.37□□□□□ -0.11
COL7A1-202ENST00000422991 GABRA5P31644 462 aa14.37□□□□□ -0.11
COL7A1-202ENST00000422991 CRYBB2P43320 205 aa14.37□□□□□ -0.11
COL7A1-202ENST00000422991 GPM6AP51674 278 aa14.37□□□□□ -0.11
COL7A1-202ENST00000422991 ART1P52961 327 aa14.37□□□□□ -0.11
COL7A1-202ENST00000422991 CNN3Q15417 329 aaKnown RBP14.37□□□□□ -0.11
COL7A1-202ENST00000422991 TRAM1Q15629 374 aa14.37□□□□□ -0.11
COL7A1-202ENST00000422991 PRAMEF6Q5VXH4 476 aa14.37□□□□□ -0.11
COL7A1-202ENST00000422991 ASPHD2Q6ICH7 369 aa14.37□□□□□ -0.11
COL7A1-202ENST00000422991 ZNF529Q6P280 563 aa14.37□□□□□ -0.11
COL7A1-202ENST00000422991 SERPINA12Q8IW75 414 aa14.37□□□□□ -0.11
COL7A1-202ENST00000422991 ZNF525Q8N782 197 aa14.37□□□□□ -0.11
COL7A1-202ENST00000422991 OR5A2Q8NGI9 324 aa14.37□□□□□ -0.11
COL7A1-202ENST00000422991 THRSPQ92748 146 aa14.37□□□□□ -0.11
COL7A1-202ENST00000422991 RDH5Q92781 318 aa14.37□□□□□ -0.11
COL7A1-202ENST00000422991 YIPF5Q969M3 257 aa14.37□□□□□ -0.11
COL7A1-202ENST00000422991 TMEM203Q969S6 136 aa14.37□□□□□ -0.11
COL7A1-202ENST00000422991 RNF170Q96K19 258 aa14.37□□□□□ -0.11
COL7A1-202ENST00000422991 ZCCHC4Q9H5U6 513 aa14.37□□□□□ -0.11
COL7A1-202ENST00000422991 GCM1Q9NP62 436 aa14.37□□□□□ -0.11
COL7A1-202ENST00000422991 MYOZ1Q9NP98 299 aaPredicted RBP14.37□□□□□ -0.11
COL7A1-202ENST00000422991 HIVEP1P15822 2718 aa14.36□□□□□ -0.11
COL7A1-202ENST00000422991 VPS13CQ709C8 3753 aa14.36□□□□□ -0.11
COL7A1-202ENST00000422991 F8P00451 2351 aa14.36□□□□□ -0.11
COL7A1-202ENST00000422991 IGKV1-9A0A0C4DH69 117 aa14.36□□□□□ -0.11
COL7A1-202ENST00000422991 PQLC2LA1A4F0 135 aa14.36□□□□□ -0.11
COL7A1-202ENST00000422991 MAGEA13PA6NCF6 341 aa14.36□□□□□ -0.11
COL7A1-202ENST00000422991 LYNX1G3V0Z9 82 aa14.36□□□□□ -0.11
COL7A1-202ENST00000422991 CCRL2O00421 344 aa14.36□□□□□ -0.11
COL7A1-202ENST00000422991 CDC14BO60729 498 aa14.36□□□□□ -0.11
COL7A1-202ENST00000422991 RP2O75695 350 aa14.36□□□□□ -0.11
COL7A1-202ENST00000422991 LYNX1P0DP58 116 aa14.36□□□□□ -0.11
COL7A1-202ENST00000422991 ATF1P18846 271 aa14.36□□□□□ -0.11
COL7A1-202ENST00000422991 MAPK3P27361 379 aaPredicted RBP14.36□□□□□ -0.11
COL7A1-202ENST00000422991 GNG3P63215 75 aa14.36□□□□□ -0.11
COL7A1-202ENST00000422991 INSL4Q14641 139 aa14.36□□□□□ -0.11
COL7A1-202ENST00000422991 MPPED2Q15777 294 aa14.36□□□□□ -0.11
COL7A1-202ENST00000422991 ACSM3Q53FZ2 586 aa14.36□□□□□ -0.11
COL7A1-202ENST00000422991 FAM76BQ5HYJ3 339 aa14.36□□□□□ -0.11
COL7A1-202ENST00000422991 UNQ9370/PRO34162Q6UXP9 181 aa14.36□□□□□ -0.11
COL7A1-202ENST00000422991 MOGAT3Q86VF5 341 aa14.36□□□□□ -0.11
COL7A1-202ENST00000422991 TGIF2LYQ8IUE0 185 aa14.36□□□□□ -0.11
COL7A1-202ENST00000422991 KRTAP1-3Q8IUG1 177 aa14.36□□□□□ -0.11
COL7A1-202ENST00000422991 OR1M1Q8NGA1 313 aa14.36□□□□□ -0.11
COL7A1-202ENST00000422991 OR5D14Q8NGL3 314 aa14.36□□□□□ -0.11
COL7A1-202ENST00000422991 OR13C9Q8NGT0 318 aa14.36□□□□□ -0.11
COL7A1-202ENST00000422991 NPRL2Q8WTW4 380 aa14.36□□□□□ -0.11
COL7A1-202ENST00000422991 MRPS26Q9BYN8 205 aaKnown RBP14.36□□□□□ -0.11
COL7A1-202ENST00000422991 TLNRD1Q9H1K6 362 aa14.36□□□□□ -0.11
COL7A1-202ENST00000422991 TAS2R4Q9NYW5 299 aa14.36□□□□□ -0.11
COL7A1-202ENST00000422991 PPP1R3CQ9UQK1 317 aa14.36□□□□□ -0.11
COL7A1-202ENST00000422991 CACNG2Q9Y698 323 aa14.36□□□□□ -0.11
COL7A1-202ENST00000422991 ZNF732B4DXR9 585 aa14.35□□□□□ -0.11
COL7A1-202ENST00000422991 SULT1B1O43704 296 aa14.35□□□□□ -0.11
COL7A1-202ENST00000422991 RGS9O75916 674 aaPredicted RBP14.35□□□□□ -0.11
COL7A1-202ENST00000422991 ALX3O95076 343 aa14.35□□□□□ -0.11
COL7A1-202ENST00000422991 GRPP07492 148 aa14.35□□□□□ -0.11
COL7A1-202ENST00000422991 FSTP19883 344 aa14.35□□□□□ -0.11
COL7A1-202ENST00000422991 COL8A2P25067 703 aa14.35□□□□□ -0.11
COL7A1-202ENST00000422991 ZNF154Q13106 437 aa14.35□□□□□ -0.11
COL7A1-202ENST00000422991 HNRNPA0Q13151 305 aaKnown RBP14.35□□□□□ -0.11
COL7A1-202ENST00000422991 Q5PR19 223 aa14.35□□□□□ -0.11
COL7A1-202ENST00000422991 TMEM91Q6ZNR0 172 aa14.35□□□□□ -0.11
COL7A1-202ENST00000422991 DNM1P46Q6ZS02 220 aa14.35□□□□□ -0.11
COL7A1-202ENST00000422991 DNAAF1Q8NEP3 725 aa14.35□□□□□ -0.11
COL7A1-202ENST00000422991 TRMT10AQ8TBZ6 339 aaKnown RBP14.35□□□□□ -0.11
COL7A1-202ENST00000422991 Q8TCH9 128 aa14.35□□□□□ -0.11
COL7A1-202ENST00000422991 ERGIC1Q969X5 290 aa14.35□□□□□ -0.11
COL7A1-202ENST00000422991 SPSB1Q96BD6 273 aa14.35□□□□□ -0.11
COL7A1-202ENST00000422991 ORAI1Q96D31 301 aa14.35□□□□□ -0.11
COL7A1-202ENST00000422991 DLL4Q9NR61 685 aa14.35□□□□□ -0.11
COL7A1-202ENST00000422991 UFSP2Q9NUQ7 469 aa14.35□□□□□ -0.11
COL7A1-202ENST00000422991 SLC7A11Q9UPY5 501 aa14.35□□□□□ -0.11
COL7A1-202ENST00000422991 TEP1Q99973 2627 aaKnown RBP14.35□□□□□ -0.11
COL7A1-202ENST00000422991 TRAV8-7A0A075B6U6 113 aa14.34□□□□□ -0.11
COL7A1-202ENST00000422991 LRP5LA4QPB2 252 aa14.34□□□□□ -0.11
COL7A1-202ENST00000422991 PIN1P1O15428 100 aa14.34□□□□□ -0.11
COL7A1-202ENST00000422991 GPX5O75715 221 aa14.34□□□□□ -0.11
COL7A1-202ENST00000422991 CSF3P09919 207 aa14.34□□□□□ -0.11
COL7A1-202ENST00000422991 IGFBP3P17936 291 aaPredicted RBP14.34□□□□□ -0.11
COL7A1-202ENST00000422991 PRKACBP22694 351 aa14.34□□□□□ -0.11
COL7A1-202ENST00000422991 AZGP1P25311 298 aaKnown RBP14.34□□□□□ -0.11
COL7A1-202ENST00000422991 TGFBR2P37173 567 aa14.34□□□□□ -0.11
COL7A1-202ENST00000422991 PMELP40967 661 aa14.34□□□□□ -0.11
COL7A1-202ENST00000422991 PDLIM4P50479 330 aa14.34□□□□□ -0.11
COL7A1-202ENST00000422991 FUT6P51993 359 aa14.34□□□□□ -0.11
COL7A1-202ENST00000422991 FABP5Q01469 135 aa14.34□□□□□ -0.11
COL7A1-202ENST00000422991 HFEQ30201 348 aa14.34□□□□□ -0.11
COL7A1-202ENST00000422991 FAM27D1Q5T7N8 215 aa14.34□□□□□ -0.11
COL7A1-202ENST00000422991 CD200R1LQ6Q8B3 271 aa14.34□□□□□ -0.11
COL7A1-202ENST00000422991 PRSS57Q6UWY2 283 aa14.34□□□□□ -0.11
COL7A1-202ENST00000422991 OR51A2Q8NGJ7 313 aa14.34□□□□□ -0.11
COL7A1-202ENST00000422991 OR51I2Q9H344 312 aa14.34□□□□□ -0.11
COL7A1-202ENST00000422991 CHODLQ9H9P2 273 aa14.34□□□□□ -0.11
COL7A1-202ENST00000422991 FN3KRPQ9HA64 309 aa14.34□□□□□ -0.11
COL7A1-202ENST00000422991 NOX4Q9NPH5 578 aa14.34□□□□□ -0.11
COL7A1-202ENST00000422991 TREM2Q9NZC2 230 aa14.34□□□□□ -0.11
COL7A1-202ENST00000422991 IGKV1-27A0A075B6S5 117 aa14.33□□□□□ -0.12
COL7A1-202ENST00000422991 FAM230AA0A1W2PPH8 454 aa14.33□□□□□ -0.12
COL7A1-202ENST00000422991 A0A1W2PPK0 400 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms