RNA–Protein interactions for RNA: ENST00000421999.7

CMSS1-201, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMSS1, Length 4,330 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-201ENST00000421999 EGR4Q05215 589 aa8.58□□□□□ -1.04
CMSS1-201ENST00000421999 ZNF239Q16600 458 aaKnown RBP8.58□□□□□ -1.04
CMSS1-201ENST00000421999 ACTBL2Q562R1 376 aa8.58□□□□□ -1.04
CMSS1-201ENST00000421999 SFRP5Q5T4F7 317 aa8.58□□□□□ -1.04
CMSS1-201ENST00000421999 OR8H3Q8N146 312 aa8.58□□□□□ -1.04
CMSS1-201ENST00000421999 PARP16Q8N5Y8 322 aa8.58□□□□□ -1.04
CMSS1-201ENST00000421999 RNF128Q8TEB7 428 aa8.58□□□□□ -1.04
CMSS1-201ENST00000421999 NUDCD2Q8WVJ2 157 aa8.58□□□□□ -1.04
CMSS1-201ENST00000421999 MS4A5Q9H3V2 200 aa8.58□□□□□ -1.04
CMSS1-201ENST00000421999 PLXNB3Q9ULL4 1909 aa8.58□□□□□ -1.04
CMSS1-201ENST00000421999 A0A0G2JMM0 328 aa8.58□□□□□ -1.04
CMSS1-201ENST00000421999 A0A1W2PPB8 328 aa8.58□□□□□ -1.04
CMSS1-201ENST00000421999 A0A1W2PRS3 328 aa8.58□□□□□ -1.04
CMSS1-201ENST00000421999 KIR3DP1A8MWS1 328 aa8.58□□□□□ -1.04
CMSS1-201ENST00000421999 PRSS44E7EML9 344 aa8.58□□□□□ -1.04
CMSS1-201ENST00000421999 GOSR2O14653 212 aa8.58□□□□□ -1.04
CMSS1-201ENST00000421999 HMGB3O15347 200 aaKnown RBP8.58□□□□□ -1.04
CMSS1-201ENST00000421999 NME2P1O60361 137 aa8.58□□□□□ -1.04
CMSS1-201ENST00000421999 DHRS3O75911 302 aa8.58□□□□□ -1.04
CMSS1-201ENST00000421999 APOA2P02652 100 aa8.58□□□□□ -1.04
CMSS1-201ENST00000421999 NME2P22392 152 aa8.58□□□□□ -1.04
CMSS1-201ENST00000421999 THBS4P35443 961 aa8.58□□□□□ -1.04
CMSS1-201ENST00000421999 MAGEB1P43366 347 aa8.58□□□□□ -1.04
CMSS1-201ENST00000421999 LSM6P62312 80 aaKnown RBP8.58□□□□□ -1.04
CMSS1-201ENST00000421999 TCF15Q12870 199 aa8.58□□□□□ -1.04
CMSS1-201ENST00000421999 RAB31Q13636 194 aa8.58□□□□□ -1.04
CMSS1-201ENST00000421999 P2RY6Q15077 328 aa8.58□□□□□ -1.04
CMSS1-201ENST00000421999 C2orf76Q3KRA6 126 aa8.58□□□□□ -1.04
CMSS1-201ENST00000421999 UNQ6494/PRO21346Q6UXR6 183 aa8.58□□□□□ -1.04
CMSS1-201ENST00000421999 OSR2Q8N2R0 312 aa8.58□□□□□ -1.04
CMSS1-201ENST00000421999 RFESDQ8TAC1 157 aa8.58□□□□□ -1.04
CMSS1-201ENST00000421999 LRRC29Q8WV35 223 aa8.58□□□□□ -1.04
CMSS1-201ENST00000421999 SPSB1Q96BD6 273 aa8.58□□□□□ -1.04
CMSS1-201ENST00000421999 MSL2Q9HCI7 577 aa8.58□□□□□ -1.04
CMSS1-201ENST00000421999 IFITM5A6NNB3 132 aa8.58□□□□□ -1.04
CMSS1-201ENST00000421999 ADAM20O43506 726 aa8.58□□□□□ -1.04
CMSS1-201ENST00000421999 SC5DO75845 299 aa8.58□□□□□ -1.04
CMSS1-201ENST00000421999 DXOO77932 396 aaKnown RBP8.58□□□□□ -1.04
CMSS1-201ENST00000421999 AQP8O94778 261 aa8.58□□□□□ -1.04
CMSS1-201ENST00000421999 CELA3AP09093 270 aa8.58□□□□□ -1.04
CMSS1-201ENST00000421999 CTSSP25774 331 aa8.58□□□□□ -1.04
CMSS1-201ENST00000421999 CD79BP40259 229 aa8.58□□□□□ -1.04
CMSS1-201ENST00000421999 CYCSP99999 105 aaKnown RBP8.58□□□□□ -1.04
CMSS1-201ENST00000421999 SNTB1Q13884 538 aaKnown RBP8.58□□□□□ -1.04
CMSS1-201ENST00000421999 INSL4Q14641 139 aa8.58□□□□□ -1.04
CMSS1-201ENST00000421999 METTL11BQ5VVY1 283 aa8.58□□□□□ -1.04
CMSS1-201ENST00000421999 ZNF385CQ66K41 422 aaPredicted RBP8.58□□□□□ -1.04
CMSS1-201ENST00000421999 MDP1Q86V88 176 aa8.58□□□□□ -1.04
CMSS1-201ENST00000421999 TCTEX1D2Q8WW35 142 aa8.58□□□□□ -1.04
CMSS1-201ENST00000421999 WNT2BQ93097 391 aa8.58□□□□□ -1.04
CMSS1-201ENST00000421999 ZFP57Q9NU63 452 aa8.58□□□□□ -1.04
CMSS1-201ENST00000421999 TMEM38BQ9NVV0 291 aa8.58□□□□□ -1.04
CMSS1-201ENST00000421999 C1orf123Q9NWV4 160 aa8.58□□□□□ -1.04
CMSS1-201ENST00000421999 SDHAF2Q9NX18 166 aa8.58□□□□□ -1.04
CMSS1-201ENST00000421999 FLVCR1Q9Y5Y0 555 aa8.58□□□□□ -1.04
CMSS1-201ENST00000421999 IGF2RP11717 2491 aa8.57□□□□□ -1.04
CMSS1-201ENST00000421999 TMEM229AB2RXF0 380 aa8.57□□□□□ -1.04
CMSS1-201ENST00000421999 SDCBPO00560 298 aaPredicted RBP8.57□□□□□ -1.04
CMSS1-201ENST00000421999 IL7P13232 177 aa8.57□□□□□ -1.04
CMSS1-201ENST00000421999 ATF1P18846 271 aa8.57□□□□□ -1.04
CMSS1-201ENST00000421999 SRP14P37108 136 aaKnown RBP8.57□□□□□ -1.04
CMSS1-201ENST00000421999 NPY4RP50391 375 aa8.57□□□□□ -1.04
CMSS1-201ENST00000421999 OR2B11Q5JQS5 317 aa8.57□□□□□ -1.04
CMSS1-201ENST00000421999 INO80CQ6PI98 192 aaPredicted RBP8.57□□□□□ -1.04
CMSS1-201ENST00000421999 DERL3Q96Q80 235 aa8.57□□□□□ -1.04
CMSS1-201ENST00000421999 SNX18Q96RF0 628 aa8.57□□□□□ -1.04
CMSS1-201ENST00000421999 A0A0G2JMP0 313 aa8.57□□□□□ -1.04
CMSS1-201ENST00000421999 TMEM82A0PJX8 343 aa8.57□□□□□ -1.04
CMSS1-201ENST00000421999 CSF3P09919 207 aa8.57□□□□□ -1.04
CMSS1-201ENST00000421999 NHLH1Q02575 133 aa8.57□□□□□ -1.04
CMSS1-201ENST00000421999 LPCAT3Q6P1A2 487 aa8.57□□□□□ -1.04
CMSS1-201ENST00000421999 CMTM4Q8IZR5 234 aa8.57□□□□□ -1.04
CMSS1-201ENST00000421999 OR2AK2Q8NG84 335 aa8.57□□□□□ -1.04
CMSS1-201ENST00000421999 OR4M2Q8NGB6 313 aa8.57□□□□□ -1.04
CMSS1-201ENST00000421999 S1PR3Q99500 378 aa8.57□□□□□ -1.04
CMSS1-201ENST00000421999 TIMP4Q99727 224 aa8.57□□□□□ -1.04
CMSS1-201ENST00000421999 PRSS50Q9UI38 385 aa8.57□□□□□ -1.04
CMSS1-201ENST00000421999 COPS3Q9UNS2 423 aa8.57□□□□□ -1.04
CMSS1-201ENST00000421999 TRGV10A0A0A0MS01 117 aa8.57□□□□□ -1.04
CMSS1-201ENST00000421999 A0A1B0GV50 99 aa8.57□□□□□ -1.04
CMSS1-201ENST00000421999 DCTN6O00399 190 aa8.57□□□□□ -1.04
CMSS1-201ENST00000421999 PHF1O43189 567 aaPredicted RBP8.57□□□□□ -1.04
CMSS1-201ENST00000421999 UPK1BO75841 260 aa8.57□□□□□ -1.04
CMSS1-201ENST00000421999 NR4A2P43354 598 aa8.57□□□□□ -1.04
CMSS1-201ENST00000421999 MRPS34P82930 218 aaKnown RBP8.57□□□□□ -1.04
CMSS1-201ENST00000421999 SRSF6Q13247 344 aaKnown RBP8.57□□□□□ -1.04
CMSS1-201ENST00000421999 KISS1Q15726 138 aa8.57□□□□□ -1.04
CMSS1-201ENST00000421999 C12orf45Q8N5I9 185 aaPredicted RBP8.57□□□□□ -1.04
CMSS1-201ENST00000421999 YIPF6Q96EC8 236 aa8.57□□□□□ -1.04
CMSS1-201ENST00000421999 LPAR2Q9HBW0 351 aa8.57□□□□□ -1.04
CMSS1-201ENST00000421999 CLDN16Q9Y5I7 305 aa8.57□□□□□ -1.04
CMSS1-201ENST00000421999 A0A1B0GUH1 482 aa8.56□□□□□ -1.04
CMSS1-201ENST00000421999 AIPO00170 330 aa8.56□□□□□ -1.04
CMSS1-201ENST00000421999 TERTO14746 1132 aaKnown RBP8.56□□□□□ -1.04
CMSS1-201ENST00000421999 HSD17B6O14756 317 aa8.56□□□□□ -1.04
CMSS1-201ENST00000421999 STX12Q86Y82 276 aa8.56□□□□□ -1.04
CMSS1-201ENST00000421999 SLC25A40Q8TBP6 338 aa8.56□□□□□ -1.04
CMSS1-201ENST00000421999 RIMS4Q9H426 269 aaPredicted RBP8.56□□□□□ -1.04
CMSS1-201ENST00000421999 NECAP2Q9NVZ3 263 aa8.56□□□□□ -1.04
CMSS1-201ENST00000421999 MBD2Q9UBB5 411 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms