RNA–Protein interactions for RNA: ENST00000417292.5

SSB-204, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 3

Gene SSB, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-204ENST00000417292 SSX3Q99909 188 aa11.2□□□□□ -0.62
SSB-204ENST00000417292 RANBP3Q9H6Z4 567 aaPredicted RBP11.2□□□□□ -0.62
SSB-204ENST00000417292 PAPOLBQ9NRJ5 636 aaKnown RBP11.2□□□□□ -0.62
SSB-204ENST00000417292 G3V2T6 193 aa11.19□□□□□ -0.62
SSB-204ENST00000417292 M0R129 80 aa11.19□□□□□ -0.62
SSB-204ENST00000417292 ACSM4P0C7M7 580 aa11.19□□□□□ -0.62
SSB-204ENST00000417292 ENTPD1P49961 510 aa11.19□□□□□ -0.62
SSB-204ENST00000417292 KPNB1Q14974 876 aaKnown RBP11.19□□□□□ -0.62
SSB-204ENST00000417292 KLHL12Q53G59 568 aa11.19□□□□□ -0.62
SSB-204ENST00000417292 NDUFA11Q86Y39 141 aa11.19□□□□□ -0.62
SSB-204ENST00000417292 CPOQ8IVL8 374 aa11.19□□□□□ -0.62
SSB-204ENST00000417292 PLPP7Q8NBV4 271 aa11.19□□□□□ -0.62
SSB-204ENST00000417292 SPRYD4Q8WW59 207 aaPredicted RBP11.19□□□□□ -0.62
SSB-204ENST00000417292 RORBQ92753 470 aa11.19□□□□□ -0.62
SSB-204ENST00000417292 NRBF2Q96F24 287 aa11.19□□□□□ -0.62
SSB-204ENST00000417292 DUS3LQ96G46 650 aaKnown RBP11.19□□□□□ -0.62
SSB-204ENST00000417292 AJUBAQ96IF1 538 aa11.19□□□□□ -0.62
SSB-204ENST00000417292 CCL13Q99616 98 aa11.19□□□□□ -0.62
SSB-204ENST00000417292 ATF6BQ99941 703 aa11.19□□□□□ -0.62
SSB-204ENST00000417292 CITED2Q99967 270 aaPredicted RBP11.19□□□□□ -0.62
SSB-204ENST00000417292 ADAT1Q9BUB4 502 aaKnown RBP11.19□□□□□ -0.62
SSB-204ENST00000417292 CENPMQ9NSP4 180 aa11.19□□□□□ -0.62
SSB-204ENST00000417292 TVP23BQ9NYZ1 205 aa11.19□□□□□ -0.62
SSB-204ENST00000417292 N6AMT1Q9Y5N5 214 aa11.19□□□□□ -0.62
SSB-204ENST00000417292 SAC3D1A6NKF1 404 aa11.18□□□□□ -0.62
SSB-204ENST00000417292 PRR23D1E9PI22 279 aaPredicted RBP11.18□□□□□ -0.62
SSB-204ENST00000417292 EBAG9O00559 213 aa11.18□□□□□ -0.62
SSB-204ENST00000417292 CHST1O43916 411 aa11.18□□□□□ -0.62
SSB-204ENST00000417292 LCATP04180 440 aa11.18□□□□□ -0.62
SSB-204ENST00000417292 GRPP07492 148 aa11.18□□□□□ -0.62
SSB-204ENST00000417292 PRR23D2P0DMB1 279 aaPredicted RBP11.18□□□□□ -0.62
SSB-204ENST00000417292 PAX6P26367 422 aa11.18□□□□□ -0.62
SSB-204ENST00000417292 EPHA2P29317 976 aa11.18□□□□□ -0.62
SSB-204ENST00000417292 GSTT1P30711 240 aa11.18□□□□□ -0.62
SSB-204ENST00000417292 PRKXP51817 358 aa11.18□□□□□ -0.62
SSB-204ENST00000417292 UBE2E1P51965 193 aa11.18□□□□□ -0.62
SSB-204ENST00000417292 CRISP1P54107 249 aa11.18□□□□□ -0.62
SSB-204ENST00000417292 KRTAP10-11P60412 298 aa11.18□□□□□ -0.62
SSB-204ENST00000417292 HABP2Q14520 560 aaPredicted RBP11.18□□□□□ -0.62
SSB-204ENST00000417292 PGAP1Q75T13 922 aa11.18□□□□□ -0.62
SSB-204ENST00000417292 ERI1Q8IV48 349 aaKnown RBP11.18□□□□□ -0.62
SSB-204ENST00000417292 CMTM4Q8IZR5 234 aa11.18□□□□□ -0.62
SSB-204ENST00000417292 FAM216BQ8N7L0 139 aa11.18□□□□□ -0.62
SSB-204ENST00000417292 OR6N2Q8NGY6 317 aa11.18□□□□□ -0.62
SSB-204ENST00000417292 WIPF2Q8TF74 440 aaPredicted RBP11.18□□□□□ -0.62
SSB-204ENST00000417292 DMRTB1Q96MA1 342 aa11.18□□□□□ -0.62
SSB-204ENST00000417292 SERTAD4Q9NUC0 356 aa11.18□□□□□ -0.62
SSB-204ENST00000417292 KCNG2Q9UJ96 466 aa11.18□□□□□ -0.62
SSB-204ENST00000417292 CD300LBA8K4G0 201 aa11.17□□□□□ -0.62
SSB-204ENST00000417292 GMDSO60547 372 aa11.17□□□□□ -0.62
SSB-204ENST00000417292 SELENOFO60613 162 aa11.17□□□□□ -0.62
SSB-204ENST00000417292 GLCEO94923 617 aa11.17□□□□□ -0.62
SSB-204ENST00000417292 HMGN1P05114 100 aa11.17□□□□□ -0.62
SSB-204ENST00000417292 SLC2A1P11166 492 aa11.17□□□□□ -0.62
SSB-204ENST00000417292 CD33P20138 364 aa11.17□□□□□ -0.62
SSB-204ENST00000417292 PAICSP22234 425 aaKnown RBP11.17□□□□□ -0.62
SSB-204ENST00000417292 CD69Q07108 199 aa11.17□□□□□ -0.62
SSB-204ENST00000417292 ACSM1Q08AH1 577 aa11.17□□□□□ -0.62
SSB-204ENST00000417292 ECH1Q13011 328 aa11.17□□□□□ -0.62
SSB-204ENST00000417292 EIF2B1Q14232 305 aaKnown RBP11.17□□□□□ -0.62
SSB-204ENST00000417292 PTGES3Q15185 160 aaKnown RBP11.17□□□□□ -0.62
SSB-204ENST00000417292 SNAPC1Q16533 368 aa11.17□□□□□ -0.62
SSB-204ENST00000417292 WDR38Q5JTN6 314 aa11.17□□□□□ -0.62
SSB-204ENST00000417292 DPY19L4Q7Z388 723 aa11.17□□□□□ -0.62
SSB-204ENST00000417292 BCDIN3DQ7Z5W3 292 aaKnown RBP11.17□□□□□ -0.62
SSB-204ENST00000417292 ZDHHC13Q8IUH4 622 aa11.17□□□□□ -0.62
SSB-204ENST00000417292 SLAMF6Q96DU3 332 aa11.17□□□□□ -0.62
SSB-204ENST00000417292 INTS14Q96SY0 518 aa11.17□□□□□ -0.62
SSB-204ENST00000417292 AMELYQ99218 206 aa11.17□□□□□ -0.62
SSB-204ENST00000417292 COPS4Q9BT78 406 aa11.17□□□□□ -0.62
SSB-204ENST00000417292 DCTN5Q9BTE1 182 aa11.17□□□□□ -0.62
SSB-204ENST00000417292 SLC22A4Q9H015 551 aa11.17□□□□□ -0.62
SSB-204ENST00000417292 ZNF702PQ9H963 129 aa11.17□□□□□ -0.62
SSB-204ENST00000417292 SLC25A19Q9HC21 320 aa11.17□□□□□ -0.62
SSB-204ENST00000417292 KRT84Q9NSB2 600 aa11.17□□□□□ -0.62
SSB-204ENST00000417292 OAZ3Q9UMX2 235 aa11.17□□□□□ -0.62
SSB-204ENST00000417292 TENM2Q9NT68 2774 aa11.17□□□□□ -0.62
SSB-204ENST00000417292 hCG_1807616A0A1W2PRN6 198 aa11.16□□□□□ -0.62
SSB-204ENST00000417292 A6NLC8 198 aa11.16□□□□□ -0.62
SSB-204ENST00000417292 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.16□□□□□ -0.62
SSB-204ENST00000417292 M0R135 149 aa11.16□□□□□ -0.62
SSB-204ENST00000417292 SELLP14151 372 aa11.16□□□□□ -0.62
SSB-204ENST00000417292 AMY2BP19961 511 aa11.16□□□□□ -0.62
SSB-204ENST00000417292 POLR2IP36954 125 aaKnown RBP11.16□□□□□ -0.62
SSB-204ENST00000417292 NAA10P41227 235 aaPredicted RBP11.16□□□□□ -0.62
SSB-204ENST00000417292 HCCSP53701 268 aa11.16□□□□□ -0.62
SSB-204ENST00000417292 TPTEP56180 551 aa11.16□□□□□ -0.62
SSB-204ENST00000417292 ACTR3P61158 418 aa11.16□□□□□ -0.62
SSB-204ENST00000417292 RPS7P62081 194 aaKnown RBP11.16□□□□□ -0.62
SSB-204ENST00000417292 COL10A1Q03692 680 aa11.16□□□□□ -0.62
SSB-204ENST00000417292 MALLQ13021 153 aa11.16□□□□□ -0.62
SSB-204ENST00000417292 IKZF1Q13422 519 aa11.16□□□□□ -0.62
SSB-204ENST00000417292 TAF13Q15543 124 aa11.16□□□□□ -0.62
SSB-204ENST00000417292 PCK2Q16822 640 aa11.16□□□□□ -0.62
SSB-204ENST00000417292 SNAI3Q3KNW1 292 aa11.16□□□□□ -0.62
SSB-204ENST00000417292 HCP5Q6MZN7 132 aa11.16□□□□□ -0.62
SSB-204ENST00000417292 MRPL21Q7Z2W9 205 aaKnown RBP11.16□□□□□ -0.62
SSB-204ENST00000417292 C11orf53Q8IXP5 236 aa11.16□□□□□ -0.62
SSB-204ENST00000417292 OR51G2Q8NGK0 314 aa11.16□□□□□ -0.62
SSB-204ENST00000417292 OR2AE1Q8NHA4 323 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms