RNA–Protein interactions for RNA: ENST00000416728.3

PAF1-202, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene PAF1, Length 1,383 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-202ENST00000416728 M0R1W7 72 aa11.82□□□□□ -0.52
PAF1-202ENST00000416728 SIGLEC5O15389 551 aa11.82□□□□□ -0.52
PAF1-202ENST00000416728 SELENOFO60613 162 aa11.82□□□□□ -0.52
PAF1-202ENST00000416728 TSPAN9O75954 239 aa11.82□□□□□ -0.52
PAF1-202ENST00000416728 TSPAN15O95858 294 aa11.82□□□□□ -0.52
PAF1-202ENST00000416728 TFF1P04155 84 aa11.82□□□□□ -0.52
PAF1-202ENST00000416728 PRR23D2P0DMB1 279 aaPredicted RBP11.82□□□□□ -0.52
PAF1-202ENST00000416728 RAP2AP10114 183 aa11.82□□□□□ -0.52
PAF1-202ENST00000416728 NDUFB7P17568 137 aa11.82□□□□□ -0.52
PAF1-202ENST00000416728 POU1F1P28069 291 aa11.82□□□□□ -0.52
PAF1-202ENST00000416728 PSMA6P60900 246 aaKnown RBP11.82□□□□□ -0.52
PAF1-202ENST00000416728 BLMHQ13867 455 aa11.82□□□□□ -0.52
PAF1-202ENST00000416728 FAM76BQ5HYJ3 339 aa11.82□□□□□ -0.52
PAF1-202ENST00000416728 ZDHHC23Q8IYP9 409 aa11.82□□□□□ -0.52
PAF1-202ENST00000416728 PNKDQ8N490 385 aa11.82□□□□□ -0.52
PAF1-202ENST00000416728 PAPD5Q8NDF8 572 aaKnown RBP11.82□□□□□ -0.52
PAF1-202ENST00000416728 OR8B12Q8NGG6 310 aa11.82□□□□□ -0.52
PAF1-202ENST00000416728 FAM81AQ8TBF8 368 aa11.82□□□□□ -0.52
PAF1-202ENST00000416728 HPSE2Q8WWQ2 592 aa11.82□□□□□ -0.52
PAF1-202ENST00000416728 TNFRSF14Q92956 283 aa11.82□□□□□ -0.52
PAF1-202ENST00000416728 FGF23Q9GZV9 251 aaPredicted RBP11.82□□□□□ -0.52
PAF1-202ENST00000416728 NIPAL2Q9H841 368 aa11.82□□□□□ -0.52
PAF1-202ENST00000416728 NLKQ9UBE8 527 aa11.82□□□□□ -0.52
PAF1-202ENST00000416728 A0A0G2JK05 382 aa11.81□□□□□ -0.52
PAF1-202ENST00000416728 ZNF816-ZNF321PA0A0X1KG74 233 aa11.81□□□□□ -0.52
PAF1-202ENST00000416728 ARRDC5A6NEK1 342 aa11.81□□□□□ -0.52
PAF1-202ENST00000416728 ANKRD61A6NGH8 418 aa11.81□□□□□ -0.52
PAF1-202ENST00000416728 OR2AT4A6NND4 320 aa11.81□□□□□ -0.52
PAF1-202ENST00000416728 PRODHO43272 600 aa11.81□□□□□ -0.52
PAF1-202ENST00000416728 CST1P01037 141 aa11.81□□□□□ -0.52
PAF1-202ENST00000416728 ACAA1P09110 424 aaPredicted RBP11.81□□□□□ -0.52
PAF1-202ENST00000416728 GLRA1P23415 457 aa11.81□□□□□ -0.52
PAF1-202ENST00000416728 DCTDP32321 178 aa11.81□□□□□ -0.52
PAF1-202ENST00000416728 GABRA2P47869 451 aa11.81□□□□□ -0.52
PAF1-202ENST00000416728 UBE2E1P51965 193 aa11.81□□□□□ -0.52
PAF1-202ENST00000416728 CAV3P56539 151 aa11.81□□□□□ -0.52
PAF1-202ENST00000416728 MS4A2Q01362 244 aa11.81□□□□□ -0.52
PAF1-202ENST00000416728 EGR3Q06889 387 aa11.81□□□□□ -0.52
PAF1-202ENST00000416728 ACSM1Q08AH1 577 aa11.81□□□□□ -0.52
PAF1-202ENST00000416728 C2orf68Q2NKX9 166 aa11.81□□□□□ -0.52
PAF1-202ENST00000416728 DUS3LQ96G46 650 aaKnown RBP11.81□□□□□ -0.52
PAF1-202ENST00000416728 LYZL4Q96KX0 146 aa11.81□□□□□ -0.52
PAF1-202ENST00000416728 LRGUKQ96M69 825 aa11.81□□□□□ -0.52
PAF1-202ENST00000416728 GPM6AP51674 278 aa11.8□□□□□ -0.52
PAF1-202ENST00000416728 GYS2P54840 703 aa11.8□□□□□ -0.52
PAF1-202ENST00000416728 RPS7P62081 194 aaKnown RBP11.8□□□□□ -0.52
PAF1-202ENST00000416728 GNG3P63215 75 aa11.8□□□□□ -0.52
PAF1-202ENST00000416728 GINS1Q14691 196 aa11.8□□□□□ -0.52
PAF1-202ENST00000416728 KRT77Q7Z794 578 aa11.8□□□□□ -0.52
PAF1-202ENST00000416728 TMEM185AQ8NFB2 350 aa11.8□□□□□ -0.52
PAF1-202ENST00000416728 CCDC124Q96CT7 223 aaKnown RBP11.8□□□□□ -0.52
PAF1-202ENST00000416728 NSL1Q96IY1 281 aa11.8□□□□□ -0.52
PAF1-202ENST00000416728 CHID1Q9BWS9 393 aa11.8□□□□□ -0.52
PAF1-202ENST00000416728 PPA2Q9H2U2 334 aa11.8□□□□□ -0.52
PAF1-202ENST00000416728 TAS2R1Q9NYW7 299 aa11.8□□□□□ -0.52
PAF1-202ENST00000416728 LAMP5Q9UJQ1 280 aa11.8□□□□□ -0.52
PAF1-202ENST00000416728 KLHDC2Q9Y2U9 406 aa11.8□□□□□ -0.52
PAF1-202ENST00000416728 LRP12Q9Y561 859 aa11.8□□□□□ -0.52
PAF1-202ENST00000416728 IGKV1D-17A0A075B6S4 117 aa11.79□□□□□ -0.52
PAF1-202ENST00000416728 H0YAE9 185 aa11.79□□□□□ -0.52
PAF1-202ENST00000416728 GNGT2O14610 69 aa11.79□□□□□ -0.52
PAF1-202ENST00000416728 RHBDL1O75783 438 aa11.79□□□□□ -0.52
PAF1-202ENST00000416728 HMGN1P05114 100 aa11.79□□□□□ -0.52
PAF1-202ENST00000416728 GABRA5P31644 462 aa11.79□□□□□ -0.52
PAF1-202ENST00000416728 MAP2K3P46734 347 aa11.79□□□□□ -0.52
PAF1-202ENST00000416728 SLC35D3Q5M8T2 416 aa11.79□□□□□ -0.52
PAF1-202ENST00000416728 SLC35E4Q6ICL7 350 aa11.79□□□□□ -0.52
PAF1-202ENST00000416728 COMMD2Q86X83 199 aa11.79□□□□□ -0.52
PAF1-202ENST00000416728 CPOQ8IVL8 374 aa11.79□□□□□ -0.52
PAF1-202ENST00000416728 ZNRF1Q8ND25 227 aa11.79□□□□□ -0.52
PAF1-202ENST00000416728 BEND2Q8NDZ0 799 aa11.79□□□□□ -0.52
PAF1-202ENST00000416728 OR5D13Q8NGL4 314 aa11.79□□□□□ -0.52
PAF1-202ENST00000416728 FAM110DQ8TAY7 271 aaPredicted RBP11.79□□□□□ -0.52
PAF1-202ENST00000416728 ASB9Q96DX5 294 aa11.79□□□□□ -0.52
PAF1-202ENST00000416728 ZNF556Q9HAH1 456 aa11.79□□□□□ -0.52
PAF1-202ENST00000416728 ELL3Q9HB65 397 aaPredicted RBP11.79□□□□□ -0.52
PAF1-202ENST00000416728 SF3B6Q9Y3B4 125 aaKnown RBP11.79□□□□□ -0.52
PAF1-202ENST00000416728 NOTCH1P46531 2555 aa11.79□□□□□ -0.52
PAF1-202ENST00000416728 TRBV23-1A0A0A0MS06 115 aa11.79□□□□□ -0.52
PAF1-202ENST00000416728 ZNF732B4DXR9 585 aa11.79□□□□□ -0.52
PAF1-202ENST00000416728 H3BUX3 64 aa11.79□□□□□ -0.52
PAF1-202ENST00000416728 CSF1P09603 554 aa11.79□□□□□ -0.52
PAF1-202ENST00000416728 PSG2P11465 335 aa11.79□□□□□ -0.52
PAF1-202ENST00000416728 OSMP13725 252 aa11.79□□□□□ -0.52
PAF1-202ENST00000416728 ALOX5APP20292 161 aa11.79□□□□□ -0.52
PAF1-202ENST00000416728 CEACAM21Q3KPI0 293 aa11.79□□□□□ -0.52
PAF1-202ENST00000416728 CEP78Q5JTW2 689 aa11.79□□□□□ -0.52
PAF1-202ENST00000416728 C1QL4Q86Z23 238 aa11.79□□□□□ -0.52
PAF1-202ENST00000416728 FAM185AQ8N0U4 392 aa11.79□□□□□ -0.52
PAF1-202ENST00000416728 OR51G2Q8NGK0 314 aa11.79□□□□□ -0.52
PAF1-202ENST00000416728 ZNF671Q8TAW3 534 aa11.79□□□□□ -0.52
PAF1-202ENST00000416728 TEX12Q9BXU0 123 aa11.79□□□□□ -0.52
PAF1-202ENST00000416728 FAM234AQ9H0X4 552 aa11.79□□□□□ -0.52
PAF1-202ENST00000416728 OR51I2Q9H344 312 aa11.79□□□□□ -0.52
PAF1-202ENST00000416728 FBLN5Q9UBX5 448 aa11.79□□□□□ -0.52
PAF1-202ENST00000416728 ZNF222Q9UK12 451 aa11.79□□□□□ -0.52
PAF1-202ENST00000416728 MAB21L2Q9Y586 359 aa11.79□□□□□ -0.52
PAF1-202ENST00000416728 VWFP04275 2813 aa11.79□□□□□ -0.52
PAF1-202ENST00000416728 A0A0U1RQV5 110 aa11.78□□□□□ -0.52
PAF1-202ENST00000416728 TMEM269A0A1B0GVZ9 245 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms