RNA–Protein interactions for RNA: ENST00000415758.1

DDX56-202, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,287 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-202ENST00000415758 ZNF702PQ9H963 129 aa12.48□□□□□ -0.41
DDX56-202ENST00000415758 IL1RAPQ9NPH3 570 aa12.48□□□□□ -0.41
DDX56-202ENST00000415758 ZNF222Q9UK12 451 aa12.48□□□□□ -0.41
DDX56-202ENST00000415758 ZNF850A8MQ14 1090 aa12.47□□□□□ -0.41
DDX56-202ENST00000415758 VGLL3A8MV65 326 aa12.47□□□□□ -0.41
DDX56-202ENST00000415758 KRT36O76013 467 aa12.47□□□□□ -0.41
DDX56-202ENST00000415758 FABP3P05413 133 aa12.47□□□□□ -0.41
DDX56-202ENST00000415758 CD28P10747 220 aa12.47□□□□□ -0.41
DDX56-202ENST00000415758 PSG2P11465 335 aa12.47□□□□□ -0.41
DDX56-202ENST00000415758 ACKR3P25106 362 aa12.47□□□□□ -0.41
DDX56-202ENST00000415758 OPRL1P41146 370 aa12.47□□□□□ -0.41
DDX56-202ENST00000415758 CRMP1Q14194 572 aa12.47□□□□□ -0.41
DDX56-202ENST00000415758 EIF2B1Q14232 305 aaKnown RBP12.47□□□□□ -0.41
DDX56-202ENST00000415758 RASSF6Q6ZTQ3 369 aa12.47□□□□□ -0.41
DDX56-202ENST00000415758 MKXQ8IYA7 352 aa12.47□□□□□ -0.41
DDX56-202ENST00000415758 LYG1Q8N1E2 194 aa12.47□□□□□ -0.41
DDX56-202ENST00000415758 LINC00471Q8N535 108 aa12.47□□□□□ -0.41
DDX56-202ENST00000415758 OR8D4Q8NGM9 314 aa12.47□□□□□ -0.41
DDX56-202ENST00000415758 HPSE2Q8WWQ2 592 aa12.47□□□□□ -0.41
DDX56-202ENST00000415758 MCUR1Q96AQ8 359 aa12.47□□□□□ -0.41
DDX56-202ENST00000415758 R3HDM4Q96D70 268 aa12.47□□□□□ -0.41
DDX56-202ENST00000415758 SDSLQ96GA7 329 aa12.47□□□□□ -0.41
DDX56-202ENST00000415758 RNF170Q96K19 258 aa12.47□□□□□ -0.41
DDX56-202ENST00000415758 BTBD10Q9BSF8 475 aa12.47□□□□□ -0.41
DDX56-202ENST00000415758 ABHD6Q9BV23 337 aa12.47□□□□□ -0.41
DDX56-202ENST00000415758 FGF23Q9GZV9 251 aaPredicted RBP12.47□□□□□ -0.41
DDX56-202ENST00000415758 ELL3Q9HB65 397 aaPredicted RBP12.47□□□□□ -0.41
DDX56-202ENST00000415758 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.47□□□□□ -0.41
DDX56-202ENST00000415758 BAIAP2Q9UQB8 552 aa12.47□□□□□ -0.41
DDX56-202ENST00000415758 LRP12Q9Y561 859 aa12.47□□□□□ -0.41
DDX56-202ENST00000415758 V9GYQ6 96 aa12.47□□□□□ -0.41
DDX56-202ENST00000415758 COL7A1Q02388 2944 aa12.47□□□□□ -0.41
DDX56-202ENST00000415758 FAM90A8PA6NJQ4 464 aa12.46□□□□□ -0.41
DDX56-202ENST00000415758 GLCEO94923 617 aa12.46□□□□□ -0.41
DDX56-202ENST00000415758 CLUP10909 449 aa12.46□□□□□ -0.41
DDX56-202ENST00000415758 GLRA1P23415 457 aa12.46□□□□□ -0.41
DDX56-202ENST00000415758 PAX6P26367 422 aa12.46□□□□□ -0.41
DDX56-202ENST00000415758 GABRA2P47869 451 aa12.46□□□□□ -0.41
DDX56-202ENST00000415758 FOXB2Q5VYV0 432 aa12.46□□□□□ -0.41
DDX56-202ENST00000415758 ZNF770Q6IQ21 691 aaPredicted RBP12.46□□□□□ -0.41
DDX56-202ENST00000415758 CPLX4Q7Z7G2 160 aa12.46□□□□□ -0.41
DDX56-202ENST00000415758 PAPD5Q8NDF8 572 aaKnown RBP12.46□□□□□ -0.41
DDX56-202ENST00000415758 PGAM5Q96HS1 289 aa12.46□□□□□ -0.41
DDX56-202ENST00000415758 WNT10AQ9GZT5 417 aa12.46□□□□□ -0.41
DDX56-202ENST00000415758 CCDC134Q9H6E4 229 aa12.46□□□□□ -0.41
DDX56-202ENST00000415758 DNAJC27Q9NZQ0 273 aa12.46□□□□□ -0.41
DDX56-202ENST00000415758 RYR3Q15413 4870 aa12.46□□□□□ -0.42
DDX56-202ENST00000415758 RHBDL1O75783 438 aa12.45□□□□□ -0.42
DDX56-202ENST00000415758 GASTP01350 101 aa12.45□□□□□ -0.42
DDX56-202ENST00000415758 BMXP51813 675 aa12.45□□□□□ -0.42
DDX56-202ENST00000415758 HABP2Q14520 560 aaPredicted RBP12.45□□□□□ -0.42
DDX56-202ENST00000415758 GFOD2Q3B7J2 385 aa12.45□□□□□ -0.42
DDX56-202ENST00000415758 SHFQ7M4L6 423 aa12.45□□□□□ -0.42
DDX56-202ENST00000415758 TIGD4Q8IY51 512 aa12.45□□□□□ -0.42
DDX56-202ENST00000415758 FAM185AQ8N0U4 392 aa12.45□□□□□ -0.42
DDX56-202ENST00000415758 RNF148Q8N7C7 305 aa12.45□□□□□ -0.42
DDX56-202ENST00000415758 TMEM185AQ8NFB2 350 aa12.45□□□□□ -0.42
DDX56-202ENST00000415758 OR9Q2Q8NGE9 314 aa12.45□□□□□ -0.42
DDX56-202ENST00000415758 OR6K6Q8NGW6 343 aa12.45□□□□□ -0.42
DDX56-202ENST00000415758 PIGCQ92535 297 aa12.45□□□□□ -0.42
DDX56-202ENST00000415758 CMTM5Q96DZ9 223 aa12.45□□□□□ -0.42
DDX56-202ENST00000415758 INTS14Q96SY0 518 aa12.45□□□□□ -0.42
DDX56-202ENST00000415758 AMELYQ99218 206 aa12.45□□□□□ -0.42
DDX56-202ENST00000415758 CITED2Q99967 270 aaPredicted RBP12.45□□□□□ -0.42
DDX56-202ENST00000415758 TSSK6Q9BXA6 273 aa12.45□□□□□ -0.42
DDX56-202ENST00000415758 OR51I2Q9H344 312 aa12.45□□□□□ -0.42
DDX56-202ENST00000415758 C19orf12Q9NSK7 152 aa12.45□□□□□ -0.42
DDX56-202ENST00000415758 MAGEL2Q9UJ55 1249 aa12.45□□□□□ -0.42
DDX56-202ENST00000415758 LYVE1Q9Y5Y7 322 aa12.45□□□□□ -0.42
DDX56-202ENST00000415758 A0A1W2PPH5 198 aa12.44□□□□□ -0.42
DDX56-202ENST00000415758 HSD17B1P14061 328 aa12.44□□□□□ -0.42
DDX56-202ENST00000415758 FAHP16930 419 aa12.44□□□□□ -0.42
DDX56-202ENST00000415758 PAICSP22234 425 aaKnown RBP12.44□□□□□ -0.42
DDX56-202ENST00000415758 LGALS4P56470 323 aa12.44□□□□□ -0.42
DDX56-202ENST00000415758 TMEM200BQ69YZ2 307 aa12.44□□□□□ -0.42
DDX56-202ENST00000415758 CCBE1Q6UXH8 406 aaPredicted RBP12.44□□□□□ -0.42
DDX56-202ENST00000415758 KCTD8Q6ZWB6 473 aa12.44□□□□□ -0.42
DDX56-202ENST00000415758 ZDHHC23Q8IYP9 409 aa12.44□□□□□ -0.42
DDX56-202ENST00000415758 OR6N2Q8NGY6 317 aa12.44□□□□□ -0.42
DDX56-202ENST00000415758 OR4Q3Q8NH05 313 aa12.44□□□□□ -0.42
DDX56-202ENST00000415758 ZNF671Q8TAW3 534 aa12.44□□□□□ -0.42
DDX56-202ENST00000415758 ITFG2Q969R8 447 aa12.44□□□□□ -0.42
DDX56-202ENST00000415758 LYZL4Q96KX0 146 aa12.44□□□□□ -0.42
DDX56-202ENST00000415758 NKX3-1Q99801 234 aaPredicted RBP12.44□□□□□ -0.42
DDX56-202ENST00000415758 BRD7Q9NPI1 651 aa12.44□□□□□ -0.42
DDX56-202ENST00000415758 RASL12Q9NYN1 266 aa12.44□□□□□ -0.42
DDX56-202ENST00000415758 TCF19Q9Y242 345 aa12.44□□□□□ -0.42
DDX56-202ENST00000415758 TENM3Q9P273 2699 aa12.43□□□□□ -0.42
DDX56-202ENST00000415758 hCG_1809904A0A1W2PP81 198 aa12.43□□□□□ -0.42
DDX56-202ENST00000415758 A0A1W2PPE2 198 aa12.43□□□□□ -0.42
DDX56-202ENST00000415758 A0A1W2PR64 198 aa12.43□□□□□ -0.42
DDX56-202ENST00000415758 A0A1W2PRV1 198 aa12.43□□□□□ -0.42
DDX56-202ENST00000415758 A6NDX4 124 aa12.43□□□□□ -0.42
DDX56-202ENST00000415758 MTRF1O75570 445 aaKnown RBP12.43□□□□□ -0.42
DDX56-202ENST00000415758 H2BFMP0C1H6 154 aa12.43□□□□□ -0.42
DDX56-202ENST00000415758 GPM6AP51674 278 aa12.43□□□□□ -0.42
DDX56-202ENST00000415758 RPL31P62899 125 aaKnown RBP12.43□□□□□ -0.42
DDX56-202ENST00000415758 GNG3P63215 75 aa12.43□□□□□ -0.42
DDX56-202ENST00000415758 CNN3Q15417 329 aaKnown RBP12.43□□□□□ -0.42
DDX56-202ENST00000415758 CEACAM21Q3KPI0 293 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms