RNA–Protein interactions for RNA: ENST00000414419.6

RFFL-204, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-204ENST00000414419 TLNRD1Q9H1K6 362 aa9.33□□□□□ -0.92
RFFL-204ENST00000414419 RASSF4Q9H2L5 321 aa9.33□□□□□ -0.92
RFFL-204ENST00000414419 GMPPBQ9Y5P6 360 aa9.33□□□□□ -0.92
RFFL-204ENST00000414419 A0A1B0GVI7 797 aa9.32□□□□□ -0.92
RFFL-204ENST00000414419 OR5B21A6NL26 309 aa9.32□□□□□ -0.92
RFFL-204ENST00000414419 SRRM5B3KS81 715 aa9.32□□□□□ -0.92
RFFL-204ENST00000414419 P2RY10O00398 339 aa9.32□□□□□ -0.92
RFFL-204ENST00000414419 DVL1O14640 695 aa9.32□□□□□ -0.92
RFFL-204ENST00000414419 AKR7A2O43488 359 aa9.32□□□□□ -0.92
RFFL-204ENST00000414419 NDUFB3O43676 98 aa9.32□□□□□ -0.92
RFFL-204ENST00000414419 SRSF10O75494 262 aaKnown RBP9.32□□□□□ -0.92
RFFL-204ENST00000414419 ECDO95905 644 aaPredicted RBP9.32□□□□□ -0.92
RFFL-204ENST00000414419 NRASP01111 189 aa9.32□□□□□ -0.92
RFFL-204ENST00000414419 FSHBP01225 129 aa9.32□□□□□ -0.92
RFFL-204ENST00000414419 FAHP16930 419 aa9.32□□□□□ -0.92
RFFL-204ENST00000414419 GLRA1P23415 457 aa9.32□□□□□ -0.92
RFFL-204ENST00000414419 HILS1P60008 231 aa9.32□□□□□ -0.92
RFFL-204ENST00000414419 ACTC1P68032 377 aa9.32□□□□□ -0.92
RFFL-204ENST00000414419 ACTA1P68133 377 aa9.32□□□□□ -0.92
RFFL-204ENST00000414419 PAX2Q02962 417 aa9.32□□□□□ -0.92
RFFL-204ENST00000414419 ODF4Q2M2E3 257 aa9.32□□□□□ -0.92
RFFL-204ENST00000414419 FAM76BQ5HYJ3 339 aa9.32□□□□□ -0.92
RFFL-204ENST00000414419 CLVS2Q5SYC1 327 aa9.32□□□□□ -0.92
RFFL-204ENST00000414419 DOK3Q7L591 496 aa9.32□□□□□ -0.92
RFFL-204ENST00000414419 SSX6Q7RTT6 188 aa9.32□□□□□ -0.92
RFFL-204ENST00000414419 PQLC1Q8N2U9 271 aa9.32□□□□□ -0.92
RFFL-204ENST00000414419 ZFAND2BQ8WV99 257 aa9.32□□□□□ -0.92
RFFL-204ENST00000414419 HPSE2Q8WWQ2 592 aa9.32□□□□□ -0.92
RFFL-204ENST00000414419 ST8SIA4Q92187 359 aa9.32□□□□□ -0.92
RFFL-204ENST00000414419 UBE2FQ969M7 185 aa9.32□□□□□ -0.92
RFFL-204ENST00000414419 C12orf43Q96C57 262 aaKnown RBP9.32□□□□□ -0.92
RFFL-204ENST00000414419 MYCBPQ99417 103 aaPredicted RBP9.32□□□□□ -0.92
RFFL-204ENST00000414419 CCL13Q99616 98 aa9.32□□□□□ -0.92
RFFL-204ENST00000414419 PLEKHA1Q9HB21 404 aa9.32□□□□□ -0.92
RFFL-204ENST00000414419 KAAG1Q9UBP8 84 aa9.32□□□□□ -0.92
RFFL-204ENST00000414419 CTSZQ9UBR2 303 aa9.32□□□□□ -0.92
RFFL-204ENST00000414419 GNG8Q9UK08 70 aa9.32□□□□□ -0.92
RFFL-204ENST00000414419 PCDHGB1Q9Y5G3 927 aa9.32□□□□□ -0.92
RFFL-204ENST00000414419 DAPL1A0PJW8 107 aa9.31□□□□□ -0.92
RFFL-204ENST00000414419 NKX6-3A6NJ46 265 aa9.31□□□□□ -0.92
RFFL-204ENST00000414419 C22orf46C9J442 243 aa9.31□□□□□ -0.92
RFFL-204ENST00000414419 TNFRSF13BO14836 293 aaPredicted RBP9.31□□□□□ -0.92
RFFL-204ENST00000414419 SYT7O43581 403 aa9.31□□□□□ -0.92
RFFL-204ENST00000414419 MPZL2O60487 215 aa9.31□□□□□ -0.92
RFFL-204ENST00000414419 ENTPD6O75354 484 aa9.31□□□□□ -0.92
RFFL-204ENST00000414419 IGLV3-1P01715 115 aa9.31□□□□□ -0.92
RFFL-204ENST00000414419 FGF12P61328 243 aa9.31□□□□□ -0.92
RFFL-204ENST00000414419 SNRPGP62308 76 aaKnown RBP9.31□□□□□ -0.92
RFFL-204ENST00000414419 OCLNQ16625 522 aa9.31□□□□□ -0.92
RFFL-204ENST00000414419 C11orf91Q3C1V1 193 aa9.31□□□□□ -0.92
RFFL-204ENST00000414419 LRRC10Q5BKY1 277 aa9.31□□□□□ -0.92
RFFL-204ENST00000414419 DMRTC1Q5HYR2 192 aa9.31□□□□□ -0.92
RFFL-204ENST00000414419 WDR38Q5JTN6 314 aa9.31□□□□□ -0.92
RFFL-204ENST00000414419 SLC25A30Q5SVS4 291 aa9.31□□□□□ -0.92
RFFL-204ENST00000414419 METTL11BQ5VVY1 283 aa9.31□□□□□ -0.92
RFFL-204ENST00000414419 BTN2A1Q7KYR7 527 aa9.31□□□□□ -0.92
RFFL-204ENST00000414419 KRT74Q7RTS7 529 aa9.31□□□□□ -0.92
RFFL-204ENST00000414419 CATSPERDQ86XM0 798 aa9.31□□□□□ -0.92
RFFL-204ENST00000414419 OR5T2Q8NGG2 359 aa9.31□□□□□ -0.92
RFFL-204ENST00000414419 TMIGD2Q96BF3 282 aa9.31□□□□□ -0.92
RFFL-204ENST00000414419 UPRTQ96BW1 309 aa9.31□□□□□ -0.92
RFFL-204ENST00000414419 RNFT2Q96EX2 444 aa9.31□□□□□ -0.92
RFFL-204ENST00000414419 MRPL48Q96GC5 212 aaKnown RBP9.31□□□□□ -0.92
RFFL-204ENST00000414419 MED30Q96HR3 178 aa9.31□□□□□ -0.92
RFFL-204ENST00000414419 Q96MT0 163 aa9.31□□□□□ -0.92
RFFL-204ENST00000414419 PCGF1Q9BSM1 259 aa9.31□□□□□ -0.92
RFFL-204ENST00000414419 OR51I2Q9H344 312 aa9.31□□□□□ -0.92
RFFL-204ENST00000414419 SNTG1Q9NSN8 517 aa9.31□□□□□ -0.92
RFFL-204ENST00000414419 ZNF69Q9UC07 566 aa9.31□□□□□ -0.92
RFFL-204ENST00000414419 SLC22A13Q9Y226 551 aa9.31□□□□□ -0.92
RFFL-204ENST00000414419 STAB1Q9NY15 2570 aa9.3□□□□□ -0.92
RFFL-204ENST00000414419 IGHV3OR16-10A0A075B7F0 116 aa9.3□□□□□ -0.92
RFFL-204ENST00000414419 TRAV40A0A0B4J280 105 aa9.3□□□□□ -0.92
RFFL-204ENST00000414419 DHRS7CA6NNS2 312 aa9.3□□□□□ -0.92
RFFL-204ENST00000414419 ZNF879B4DU55 563 aa9.3□□□□□ -0.92
RFFL-204ENST00000414419 DLGAP1O14490 977 aa9.3□□□□□ -0.92
RFFL-204ENST00000414419 GPR37O15354 613 aa9.3□□□□□ -0.92
RFFL-204ENST00000414419 TOX4O94842 621 aa9.3□□□□□ -0.92
RFFL-204ENST00000414419 IGHV4-38-2P0DP08 117 aa9.3□□□□□ -0.92
RFFL-204ENST00000414419 GABRA2P47869 451 aa9.3□□□□□ -0.92
RFFL-204ENST00000414419 ACTG1P63261 375 aa9.3□□□□□ -0.92
RFFL-204ENST00000414419 ZNF85Q03923 595 aa9.3□□□□□ -0.92
RFFL-204ENST00000414419 IKZF1Q13422 519 aa9.3□□□□□ -0.92
RFFL-204ENST00000414419 TP53I3Q53FA7 332 aa9.3□□□□□ -0.92
RFFL-204ENST00000414419 KLF17Q5JT82 389 aaPredicted RBP9.3□□□□□ -0.92
RFFL-204ENST00000414419 GPR157Q5UAW9 335 aa9.3□□□□□ -0.92
RFFL-204ENST00000414419 HAGHLQ6PII5 290 aaPredicted RBP9.3□□□□□ -0.92
RFFL-204ENST00000414419 KCTD20Q7Z5Y7 419 aa9.3□□□□□ -0.92
RFFL-204ENST00000414419 ZNF573Q86YE8 665 aa9.3□□□□□ -0.92
RFFL-204ENST00000414419 CCDC54Q8NEL0 328 aa9.3□□□□□ -0.92
RFFL-204ENST00000414419 ZNF555Q8NEP9 628 aa9.3□□□□□ -0.92
RFFL-204ENST00000414419 OR14K1Q8NGZ2 314 aa9.3□□□□□ -0.92
RFFL-204ENST00000414419 RORBQ92753 470 aa9.3□□□□□ -0.92
RFFL-204ENST00000414419 DACT3Q96B18 629 aaPredicted RBP9.3□□□□□ -0.92
RFFL-204ENST00000414419 SEH1LQ96EE3 360 aa9.3□□□□□ -0.92
RFFL-204ENST00000414419 MBOAT4Q96T53 435 aa9.3□□□□□ -0.92
RFFL-204ENST00000414419 SLC29A1Q99808 456 aa9.3□□□□□ -0.92
RFFL-204ENST00000414419 DNTTIP1Q9H147 329 aa9.3□□□□□ -0.92
RFFL-204ENST00000414419 WDR13Q9H1Z4 485 aa9.3□□□□□ -0.92
RFFL-204ENST00000414419 SMURF1Q9HCE7 757 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms