RNA–Protein interactions for RNA: ENST00000414220.2

CHD1-202, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 434 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-202ENST00000414220 WDR38Q5JTN6 314 aa12.33□□□□□ -0.44
CHD1-202ENST00000414220 CEP78Q5JTW2 689 aa12.33□□□□□ -0.44
CHD1-202ENST00000414220 SFRP4Q6FHJ7 346 aaPredicted RBP12.33□□□□□ -0.44
CHD1-202ENST00000414220 BTNL3Q6UXE8 466 aa12.33□□□□□ -0.44
CHD1-202ENST00000414220 TMPRSS11AQ6ZMR5 421 aa12.33□□□□□ -0.44
CHD1-202ENST00000414220 ZNF826PQ6ZT77 177 aa12.33□□□□□ -0.44
CHD1-202ENST00000414220 ZNF573Q86YE8 665 aa12.33□□□□□ -0.44
CHD1-202ENST00000414220 OR14K1Q8NGZ2 314 aa12.33□□□□□ -0.44
CHD1-202ENST00000414220 C4orf36Q96KX1 117 aa12.33□□□□□ -0.44
CHD1-202ENST00000414220 SSBP3Q9BWW4 388 aaPredicted RBP12.33□□□□□ -0.44
CHD1-202ENST00000414220 TLNRD1Q9H1K6 362 aa12.33□□□□□ -0.44
CHD1-202ENST00000414220 NEK6Q9HC98 313 aa12.33□□□□□ -0.44
CHD1-202ENST00000414220 CLN8Q9UBY8 286 aa12.33□□□□□ -0.44
CHD1-202ENST00000414220 A0A1B0GTI1 187 aa12.32□□□□□ -0.44
CHD1-202ENST00000414220 F5H0A9 414 aaPredicted RBP12.32□□□□□ -0.44
CHD1-202ENST00000414220 CLIC3O95833 236 aa12.32□□□□□ -0.44
CHD1-202ENST00000414220 IGHA1P01876 353 aa12.32□□□□□ -0.44
CHD1-202ENST00000414220 CCDC159P0C7I6 412 aa12.32□□□□□ -0.44
CHD1-202ENST00000414220 OCM2P0CE71 109 aa12.32□□□□□ -0.44
CHD1-202ENST00000414220 OCMP0CE72 109 aaPredicted RBP12.32□□□□□ -0.44
CHD1-202ENST00000414220 CFHR2P36980 270 aa12.32□□□□□ -0.44
CHD1-202ENST00000414220 PITPNBP48739 271 aa12.32□□□□□ -0.44
CHD1-202ENST00000414220 ISL1P61371 349 aa12.32□□□□□ -0.44
CHD1-202ENST00000414220 FAM76BQ5HYJ3 339 aa12.32□□□□□ -0.44
CHD1-202ENST00000414220 FAM201AQ5SY85 155 aa12.32□□□□□ -0.44
CHD1-202ENST00000414220 CD276Q5ZPR3 534 aa12.32□□□□□ -0.44
CHD1-202ENST00000414220 FDX2Q6P4F2 183 aa12.32□□□□□ -0.44
CHD1-202ENST00000414220 WDR82Q6UXN9 313 aa12.32□□□□□ -0.44
CHD1-202ENST00000414220 GCSAMQ8N6F7 178 aa12.32□□□□□ -0.44
CHD1-202ENST00000414220 SCCPDHQ8NBX0 429 aa12.32□□□□□ -0.44
CHD1-202ENST00000414220 OR52I1Q8NGK6 324 aa12.32□□□□□ -0.44
CHD1-202ENST00000414220 OR2G2Q8NGZ5 317 aa12.32□□□□□ -0.44
CHD1-202ENST00000414220 APH1BQ8WW43 257 aa12.32□□□□□ -0.44
CHD1-202ENST00000414220 MRI1Q9BV20 369 aa12.32□□□□□ -0.44
CHD1-202ENST00000414220 COMMD4Q9H0A8 199 aa12.32□□□□□ -0.44
CHD1-202ENST00000414220 FGF20Q9NP95 211 aaPredicted RBP12.32□□□□□ -0.44
CHD1-202ENST00000414220 ERVK13-1Q9NX77 482 aa12.32□□□□□ -0.44
CHD1-202ENST00000414220 DNAJB11Q9UBS4 358 aa12.32□□□□□ -0.44
CHD1-202ENST00000414220 MYRFQ9Y2G1 1151 aa12.32□□□□□ -0.44
CHD1-202ENST00000414220 TANC2Q9HCD6 1990 aa12.32□□□□□ -0.44
CHD1-202ENST00000414220 TLN2Q9Y4G6 2542 aa12.31□□□□□ -0.44
CHD1-202ENST00000414220 ANKRD61A6NGH8 418 aa12.31□□□□□ -0.44
CHD1-202ENST00000414220 A8MXK9 166 aa12.31□□□□□ -0.44
CHD1-202ENST00000414220 H0YJX3 145 aa12.31□□□□□ -0.44
CHD1-202ENST00000414220 LHBP01229 141 aa12.31□□□□□ -0.44
CHD1-202ENST00000414220 ISG15P05161 165 aa12.31□□□□□ -0.44
CHD1-202ENST00000414220 ZNF20P17024 532 aa12.31□□□□□ -0.44
CHD1-202ENST00000414220 CD80P33681 288 aa12.31□□□□□ -0.44
CHD1-202ENST00000414220 THBS2P35442 1172 aa12.31□□□□□ -0.44
CHD1-202ENST00000414220 CSNK2BP67870 215 aa12.31□□□□□ -0.44
CHD1-202ENST00000414220 ALKBH1Q13686 389 aaKnown RBP12.31□□□□□ -0.44
CHD1-202ENST00000414220 CNN3Q15417 329 aaKnown RBP12.31□□□□□ -0.44
CHD1-202ENST00000414220 KRTAP21-3Q3LHN1 58 aa12.31□□□□□ -0.44
CHD1-202ENST00000414220 TEX36Q5VZQ5 186 aa12.31□□□□□ -0.44
CHD1-202ENST00000414220 Q6ZSR3 168 aa12.31□□□□□ -0.44
CHD1-202ENST00000414220 SLC36A1Q7Z2H8 476 aa12.31□□□□□ -0.44
CHD1-202ENST00000414220 C11orf53Q8IXP5 236 aa12.31□□□□□ -0.44
CHD1-202ENST00000414220 ZNF676Q8N7Q3 588 aa12.31□□□□□ -0.44
CHD1-202ENST00000414220 CNIH3Q8TBE1 160 aa12.31□□□□□ -0.44
CHD1-202ENST00000414220 PP6455Q8WZ26 134 aa12.31□□□□□ -0.44
CHD1-202ENST00000414220 RPL3LQ92901 407 aaKnown RBP12.31□□□□□ -0.44
CHD1-202ENST00000414220 C12orf43Q96C57 262 aaKnown RBP12.31□□□□□ -0.44
CHD1-202ENST00000414220 TMEM80Q96HE8 168 aa12.31□□□□□ -0.44
CHD1-202ENST00000414220 C7orf69Q9H7B7 122 aa12.31□□□□□ -0.44
CHD1-202ENST00000414220 GPR173Q9NS66 373 aa12.31□□□□□ -0.44
CHD1-202ENST00000414220 HHLA2Q9UM44 414 aa12.31□□□□□ -0.44
CHD1-202ENST00000414220 POLDIP2Q9Y2S7 368 aa12.31□□□□□ -0.44
CHD1-202ENST00000414220 POLR3KQ9Y2Y1 108 aaPredicted RBP12.31□□□□□ -0.44
CHD1-202ENST00000414220 EXOSC1Q9Y3B2 195 aaKnown RBP12.31□□□□□ -0.44
CHD1-202ENST00000414220 YLPM1P49750 1951 aaKnown RBP12.3□□□□□ -0.44
CHD1-202ENST00000414220 C2CD3Q4AC94 2353 aa12.3□□□□□ -0.44
CHD1-202ENST00000414220 LOC107986453A0A1B0GWG9 222 aa12.3□□□□□ -0.44
CHD1-202ENST00000414220 EFCAB10A6NFE3 127 aa12.3□□□□□ -0.44
CHD1-202ENST00000414220 ADAM20O43506 726 aa12.3□□□□□ -0.44
CHD1-202ENST00000414220 WBP4O75554 376 aaKnown RBP12.3□□□□□ -0.44
CHD1-202ENST00000414220 GLRA1P23415 457 aa12.3□□□□□ -0.44
CHD1-202ENST00000414220 TMEM42Q69YG0 159 aa12.3□□□□□ -0.44
CHD1-202ENST00000414220 HAGHLQ6PII5 290 aaPredicted RBP12.3□□□□□ -0.44
CHD1-202ENST00000414220 WDR86Q86TI4 376 aa12.3□□□□□ -0.44
CHD1-202ENST00000414220 PRSS35Q8N3Z0 413 aa12.3□□□□□ -0.44
CHD1-202ENST00000414220 C19orf18Q8NEA5 215 aa12.3□□□□□ -0.44
CHD1-202ENST00000414220 NANPQ8TBE9 248 aa12.3□□□□□ -0.44
CHD1-202ENST00000414220 HPSE2Q8WWQ2 592 aa12.3□□□□□ -0.44
CHD1-202ENST00000414220 PELI1Q96FA3 418 aa12.3□□□□□ -0.44
CHD1-202ENST00000414220 JAM3Q9BX67 310 aa12.3□□□□□ -0.44
CHD1-202ENST00000414220 OR51I2Q9H344 312 aa12.3□□□□□ -0.44
CHD1-202ENST00000414220 METTL17Q9H7H0 456 aaPredicted RBP12.3□□□□□ -0.44
CHD1-202ENST00000414220 PPP1R3EQ9H7J1 279 aa12.3□□□□□ -0.44
CHD1-202ENST00000414220 FRRS1LQ9P0K9 344 aa12.3□□□□□ -0.44
CHD1-202ENST00000414220 METRNQ9UJH8 293 aa12.3□□□□□ -0.44
CHD1-202ENST00000414220 DIMT1Q9UNQ2 313 aaKnown RBP12.3□□□□□ -0.44
CHD1-202ENST00000414220 CAB39Q9Y376 341 aaPredicted RBP12.3□□□□□ -0.44
CHD1-202ENST00000414220 NKX6-3A6NJ46 265 aa12.29□□□□□ -0.44
CHD1-202ENST00000414220 TMEM212A6NML5 194 aa12.29□□□□□ -0.44
CHD1-202ENST00000414220 SRRM5B3KS81 715 aa12.29□□□□□ -0.44
CHD1-202ENST00000414220 TMPRSS2O15393 492 aa12.29□□□□□ -0.44
CHD1-202ENST00000414220 GYPAP02724 150 aa12.29□□□□□ -0.44
CHD1-202ENST00000414220 HAAOP46952 286 aa12.29□□□□□ -0.44
CHD1-202ENST00000414220 FUT6P51993 359 aa12.29□□□□□ -0.44
CHD1-202ENST00000414220 HNRNPA0Q13151 305 aaKnown RBP12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms