RNA–Protein interactions for RNA: ENST00000413987.1

SNHG3-201, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 1 (best)

Gene SNHG3, Length 2,201 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-201ENST00000413987 EIF3GO75821 320 aaKnown RBP eCLIP8.29□□□□□ -1.08
SNHG3-201ENST00000413987 GUSBP08236 651 aa8.29□□□□□ -1.08
SNHG3-201ENST00000413987 FAHP16930 419 aa8.29□□□□□ -1.08
SNHG3-201ENST00000413987 BMP5P22003 454 aa8.29□□□□□ -1.08
SNHG3-201ENST00000413987 PTGER1P34995 402 aa8.29□□□□□ -1.08
SNHG3-201ENST00000413987 DCDP81605 110 aaKnown RBP8.29□□□□□ -1.08
SNHG3-201ENST00000413987 SLC9A3R2Q15599 337 aa8.29□□□□□ -1.08
SNHG3-201ENST00000413987 TMEM249Q2WGJ8 235 aa8.29□□□□□ -1.08
SNHG3-201ENST00000413987 COX19Q49B96 90 aa8.29□□□□□ -1.08
SNHG3-201ENST00000413987 EMC4Q5J8M3 183 aa8.29□□□□□ -1.08
SNHG3-201ENST00000413987 ELP2Q6IA86 826 aa8.29□□□□□ -1.08
SNHG3-201ENST00000413987 ZNF613Q6PF04 617 aa8.29□□□□□ -1.08
SNHG3-201ENST00000413987 C5orf46Q6UWT4 87 aa8.29□□□□□ -1.08
SNHG3-201ENST00000413987 ZNF793Q6ZN11 406 aa8.29□□□□□ -1.08
SNHG3-201ENST00000413987 C17orf82Q86X59 251 aaPredicted RBP8.29□□□□□ -1.08
SNHG3-201ENST00000413987 LDLRAD3Q86YD5 345 aa8.29□□□□□ -1.08
SNHG3-201ENST00000413987 OR2AK2Q8NG84 335 aa8.29□□□□□ -1.08
SNHG3-201ENST00000413987 OR5D16Q8NGK9 328 aa8.29□□□□□ -1.08
SNHG3-201ENST00000413987 OR52I2Q8NH67 350 aa8.29□□□□□ -1.08
SNHG3-201ENST00000413987 RNF133Q8WVZ7 376 aa8.29□□□□□ -1.08
SNHG3-201ENST00000413987 TEAD3Q99594 435 aa8.29□□□□□ -1.08
SNHG3-201ENST00000413987 ENKD1Q9H0I2 346 aa8.29□□□□□ -1.08
SNHG3-201ENST00000413987 GSN-AS1Q9NRJ2 163 aa8.29□□□□□ -1.08
SNHG3-201ENST00000413987 JKAMPQ9P055 326 aa8.29□□□□□ -1.08
SNHG3-201ENST00000413987 U3KQA8 63 aa8.29□□□□□ -1.08
SNHG3-201ENST00000413987 SCN2AQ99250 2005 aa8.29□□□□□ -1.08
SNHG3-201ENST00000413987 OTOGLQ3ZCN5 2332 aa8.29□□□□□ -1.08
SNHG3-201ENST00000413987 RIF1Q5UIP0 2472 aaKnown RBP8.29□□□□□ -1.08
SNHG3-201ENST00000413987 LRIT2A6NDA9 550 aa8.29□□□□□ -1.08
SNHG3-201ENST00000413987 ZNF860A6NHJ4 632 aa8.29□□□□□ -1.08
SNHG3-201ENST00000413987 NPIPB11E5RHQ5 1161 aa8.29□□□□□ -1.08
SNHG3-201ENST00000413987 IMPA2O14732 288 aa8.29□□□□□ -1.08
SNHG3-201ENST00000413987 ERI3O43414 337 aaKnown RBP8.29□□□□□ -1.08
SNHG3-201ENST00000413987 EIF1BO60739 113 aaKnown RBP8.29□□□□□ -1.08
SNHG3-201ENST00000413987 RAB40ALP0C0E4 278 aa8.29□□□□□ -1.08
SNHG3-201ENST00000413987 ZNF806P0C7X5 589 aa8.29□□□□□ -1.08
SNHG3-201ENST00000413987 EIF1P41567 113 aaKnown RBP8.29□□□□□ -1.08
SNHG3-201ENST00000413987 UQCRFS1P47985 274 aa8.29□□□□□ -1.08
SNHG3-201ENST00000413987 NPBWR2P48146 333 aa8.29□□□□□ -1.08
SNHG3-201ENST00000413987 UCNP55089 124 aa8.29□□□□□ -1.08
SNHG3-201ENST00000413987 PCBP4P57723 403 aaKnown RBP8.29□□□□□ -1.08
SNHG3-201ENST00000413987 RAB5BP61020 215 aa8.29□□□□□ -1.08
SNHG3-201ENST00000413987 EFNB3Q15768 340 aa8.29□□□□□ -1.08
SNHG3-201ENST00000413987 LINC00303Q3SY05 128 aa8.29□□□□□ -1.08
SNHG3-201ENST00000413987 GXYLT1Q4G148 440 aa8.29□□□□□ -1.08
SNHG3-201ENST00000413987 DMKNQ6E0U4 476 aaPredicted RBP8.29□□□□□ -1.08
SNHG3-201ENST00000413987 P4HA3Q7Z4N8 544 aa8.29□□□□□ -1.08
SNHG3-201ENST00000413987 CMTM4Q8IZR5 234 aa8.29□□□□□ -1.08
SNHG3-201ENST00000413987 PUSL1Q8N0Z8 303 aaKnown RBP8.29□□□□□ -1.08
SNHG3-201ENST00000413987 OR2V1Q8NHB1 315 aa8.29□□□□□ -1.08
SNHG3-201ENST00000413987 NUDCD2Q8WVJ2 157 aa8.29□□□□□ -1.08
SNHG3-201ENST00000413987 TMEM45BQ96B21 275 aa8.29□□□□□ -1.08
SNHG3-201ENST00000413987 FAM46AQ96IP4 442 aaKnown RBP8.29□□□□□ -1.08
SNHG3-201ENST00000413987 SLC35G5Q96KT7 338 aa8.29□□□□□ -1.08
SNHG3-201ENST00000413987 OR51M1Q9H341 326 aa8.29□□□□□ -1.08
SNHG3-201ENST00000413987 C1orf198Q9H425 327 aa8.29□□□□□ -1.08
SNHG3-201ENST00000413987 Q9N2J8 555 aa8.29□□□□□ -1.08
SNHG3-201ENST00000413987 MYOZ1Q9NP98 299 aaPredicted RBP8.29□□□□□ -1.08
SNHG3-201ENST00000413987 HINT3Q9NQE9 182 aaKnown RBP8.29□□□□□ -1.08
SNHG3-201ENST00000413987 SEMA4GQ9NTN9 838 aa8.29□□□□□ -1.08
SNHG3-201ENST00000413987 SLC22A7Q9Y694 548 aa8.29□□□□□ -1.08
SNHG3-201ENST00000413987 ASCC3Q8N3C0 2202 aaKnown RBP8.28□□□□□ -1.08
SNHG3-201ENST00000413987 IGHV1OR21-1A0A087WYE8 117 aa8.28□□□□□ -1.08
SNHG3-201ENST00000413987 A0A0J9YY10 115 aa8.28□□□□□ -1.08
SNHG3-201ENST00000413987 TRBV11-1A0A0K0K1C0 115 aa8.28□□□□□ -1.08
SNHG3-201ENST00000413987 KANTRA0A1W2PQU2 76 aa8.28□□□□□ -1.08
SNHG3-201ENST00000413987 DLL1O00548 723 aa8.28□□□□□ -1.08
SNHG3-201ENST00000413987 TMPRSS11DO60235 418 aa8.28□□□□□ -1.08
SNHG3-201ENST00000413987 EIF4E2O60573 245 aaKnown RBP8.28□□□□□ -1.08
SNHG3-201ENST00000413987 IGF2P01344 180 aa8.28□□□□□ -1.08
SNHG3-201ENST00000413987 ZNF35P13682 527 aa8.28□□□□□ -1.08
SNHG3-201ENST00000413987 SPI1P17947 270 aa8.28□□□□□ -1.08
SNHG3-201ENST00000413987 GLRA1P23415 457 aa8.28□□□□□ -1.08
SNHG3-201ENST00000413987 CERS1P27544 350 aa8.28□□□□□ -1.08
SNHG3-201ENST00000413987 MPIP34949 423 aa8.28□□□□□ -1.08
SNHG3-201ENST00000413987 ACVR1BP36896 505 aa8.28□□□□□ -1.08
SNHG3-201ENST00000413987 RBMS2Q15434 407 aaKnown RBP8.28□□□□□ -1.08
SNHG3-201ENST00000413987 SYPL1Q16563 259 aa8.28□□□□□ -1.08
SNHG3-201ENST00000413987 GUCA2BQ16661 112 aa8.28□□□□□ -1.08
SNHG3-201ENST00000413987 PRAMEF17Q5VTA0 474 aa8.28□□□□□ -1.08
SNHG3-201ENST00000413987 ZNF620Q6ZNG0 422 aa8.28□□□□□ -1.08
SNHG3-201ENST00000413987 TMEM156Q8N614 296 aa8.28□□□□□ -1.08
SNHG3-201ENST00000413987 RELL2Q8NC24 303 aaPredicted RBP8.28□□□□□ -1.08
SNHG3-201ENST00000413987 ADPRHL1Q8NDY3 354 aa8.28□□□□□ -1.08
SNHG3-201ENST00000413987 OR4D9Q8NGE8 314 aa8.28□□□□□ -1.08
SNHG3-201ENST00000413987 OR14A16Q8NHC5 309 aa8.28□□□□□ -1.08
SNHG3-201ENST00000413987 THAP6Q8TBB0 222 aa8.28□□□□□ -1.08
SNHG3-201ENST00000413987 XAGE5Q8WWM1 108 aa8.28□□□□□ -1.08
SNHG3-201ENST00000413987 S100A16Q96FQ6 103 aaKnown RBP8.28□□□□□ -1.08
SNHG3-201ENST00000413987 OR2A5Q96R48 311 aa8.28□□□□□ -1.08
SNHG3-201ENST00000413987 TIMP4Q99727 224 aa8.28□□□□□ -1.08
SNHG3-201ENST00000413987 CARHSP1Q9Y2V2 147 aaKnown RBP8.28□□□□□ -1.08
SNHG3-201ENST00000413987 PPIAL4EA0A075B759 164 aa8.27□□□□□ -1.08
SNHG3-201ENST00000413987 A0A1W2PS29 197 aa8.27□□□□□ -1.08
SNHG3-201ENST00000413987 H0YGG7 62 aa8.27□□□□□ -1.08
SNHG3-201ENST00000413987 M0QXV9 152 aa8.27□□□□□ -1.08
SNHG3-201ENST00000413987 GOSR2O14653 212 aa8.27□□□□□ -1.08
SNHG3-201ENST00000413987 PPIAL4FP0DN26 164 aa8.27□□□□□ -1.08
SNHG3-201ENST00000413987 FOLR2P14207 255 aa8.27□□□□□ -1.08
SNHG3-201ENST00000413987 H2BFSP57053 126 aa8.27□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms