RNA–Protein interactions for RNA: ENST00000409945.1

USP40-202, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 2 BASIC

Gene USP40, Length 1,946 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-202ENST00000409945 CBR1P16152 277 aa5.36□□□□□ -1.55
USP40-202ENST00000409945 NPR2P20594 1047 aa5.36□□□□□ -1.55
USP40-202ENST00000409945 RRM2P31350 389 aa5.36□□□□□ -1.55
USP40-202ENST00000409945 YAP1P46937 504 aaKnown RBP5.36□□□□□ -1.55
USP40-202ENST00000409945 UGT2B15P54855 530 aa5.36□□□□□ -1.55
USP40-202ENST00000409945 PRKCDQ05655 676 aa5.36□□□□□ -1.55
USP40-202ENST00000409945 RPL18Q07020 188 aaKnown RBP5.36□□□□□ -1.55
USP40-202ENST00000409945 NPRL3Q12980 569 aa5.36□□□□□ -1.55
USP40-202ENST00000409945 FHL1Q13642 323 aa5.36□□□□□ -1.55
USP40-202ENST00000409945 GK3PQ14409 553 aa5.36□□□□□ -1.55
USP40-202ENST00000409945 RFX4Q33E94 735 aa5.36□□□□□ -1.55
USP40-202ENST00000409945 NRMQ8IXM6 262 aa5.36□□□□□ -1.55
USP40-202ENST00000409945 LINC00471Q8N535 108 aa5.36□□□□□ -1.55
USP40-202ENST00000409945 WDR31Q8NA23 367 aa5.36□□□□□ -1.55
USP40-202ENST00000409945 SPERTQ8NA61 448 aa5.36□□□□□ -1.55
USP40-202ENST00000409945 PFN4Q8NHR9 129 aa5.36□□□□□ -1.55
USP40-202ENST00000409945 CYGBQ8WWM9 190 aa5.36□□□□□ -1.55
USP40-202ENST00000409945 PYURFQ96I23 114 aa5.36□□□□□ -1.55
USP40-202ENST00000409945 RBM4BQ9BQ04 359 aaKnown RBP5.36□□□□□ -1.55
USP40-202ENST00000409945 PRSS27Q9BQR3 290 aa5.36□□□□□ -1.55
USP40-202ENST00000409945 WFDC6Q9BQY6 131 aa5.36□□□□□ -1.55
USP40-202ENST00000409945 RBM4Q9BWF3 364 aaKnown RBP5.36□□□□□ -1.55
USP40-202ENST00000409945 WNT5BQ9H1J7 359 aa5.36□□□□□ -1.55
USP40-202ENST00000409945 TXNIPQ9H3M7 391 aa5.36□□□□□ -1.55
USP40-202ENST00000409945 VCX3AQ9NNX9 186 aa5.36□□□□□ -1.55
USP40-202ENST00000409945 TAS2R5Q9NYW4 299 aa5.36□□□□□ -1.55
USP40-202ENST00000409945 TMED3Q9Y3Q3 217 aa5.36□□□□□ -1.55
USP40-202ENST00000409945 V9GYQ6 96 aa5.36□□□□□ -1.55
USP40-202ENST00000409945 HRNRQ86YZ3 2850 aaPredicted RBP5.36□□□□□ -1.55
USP40-202ENST00000409945 MAP1AP78559 2803 aaPredicted RBP5.36□□□□□ -1.55
USP40-202ENST00000409945 CSMD2Q7Z408 3487 aa5.36□□□□□ -1.55
USP40-202ENST00000409945 TRAV34A0A0B4J273 112 aa5.36□□□□□ -1.55
USP40-202ENST00000409945 IQCMA0A1B0GVH7 501 aa5.36□□□□□ -1.55
USP40-202ENST00000409945 A0A1W2PPR1 153 aa5.36□□□□□ -1.55
USP40-202ENST00000409945 SHISA9B4DS77 424 aa5.36□□□□□ -1.55
USP40-202ENST00000409945 G3V2T6 193 aa5.36□□□□□ -1.55
USP40-202ENST00000409945 GNGT2O14610 69 aa5.36□□□□□ -1.55
USP40-202ENST00000409945 GADD45GO95257 159 aa5.36□□□□□ -1.55
USP40-202ENST00000409945 PAX1P15863 534 aa5.36□□□□□ -1.55
USP40-202ENST00000409945 LOXP28300 417 aaPredicted RBP5.36□□□□□ -1.55
USP40-202ENST00000409945 AQP2P41181 271 aa5.36□□□□□ -1.55
USP40-202ENST00000409945 MAGEA2P43356 314 aa5.36□□□□□ -1.55
USP40-202ENST00000409945 IDH3GP51553 393 aaPredicted RBP5.36□□□□□ -1.55
USP40-202ENST00000409945 CRYBA2P53672 197 aa5.36□□□□□ -1.55
USP40-202ENST00000409945 FOXG1P55316 489 aaPredicted RBP5.36□□□□□ -1.55
USP40-202ENST00000409945 RPL27P61353 136 aaKnown RBP5.36□□□□□ -1.55
USP40-202ENST00000409945 PCBD1P61457 104 aa5.36□□□□□ -1.55
USP40-202ENST00000409945 ADARB1P78563 741 aaKnown RBP5.36□□□□□ -1.55
USP40-202ENST00000409945 SPIBQ01892 262 aa5.36□□□□□ -1.55
USP40-202ENST00000409945 HSF2Q03933 536 aa5.36□□□□□ -1.55
USP40-202ENST00000409945 DGCR6Q14129 220 aa5.36□□□□□ -1.55
USP40-202ENST00000409945 CNPY1Q3B7I2 92 aa5.36□□□□□ -1.55
USP40-202ENST00000409945 THEM4Q5T1C6 240 aa5.36□□□□□ -1.55
USP40-202ENST00000409945 TTC23Q5W5X9 447 aa5.36□□□□□ -1.55
USP40-202ENST00000409945 WDR88Q6ZMY6 472 aa5.36□□□□□ -1.55
USP40-202ENST00000409945 SLC16A14Q7RTX9 510 aa5.36□□□□□ -1.55
USP40-202ENST00000409945 BIVMQ86UB2 503 aa5.36□□□□□ -1.55
USP40-202ENST00000409945 HIPK1Q86Z02 1210 aa5.36□□□□□ -1.55
USP40-202ENST00000409945 LRRC17Q8N6Y2 441 aa5.36□□□□□ -1.55
USP40-202ENST00000409945 NOXO1Q8NFA2 376 aa5.36□□□□□ -1.55
USP40-202ENST00000409945 C18orf12Q96KH6 178 aa5.36□□□□□ -1.55
USP40-202ENST00000409945 ATP6V0BQ99437 205 aa5.36□□□□□ -1.55
USP40-202ENST00000409945 ALG12Q9BV10 488 aa5.36□□□□□ -1.55
USP40-202ENST00000409945 NMNAT1Q9HAN9 279 aaPredicted RBP5.36□□□□□ -1.55
USP40-202ENST00000409945 NTN4Q9HB63 628 aa5.36□□□□□ -1.55
USP40-202ENST00000409945 CCNB1IP1Q9NPC3 277 aa5.36□□□□□ -1.55
USP40-202ENST00000409945 MEPEQ9NQ76 525 aaPredicted RBP5.36□□□□□ -1.55
USP40-202ENST00000409945 USE1Q9NZ43 259 aa5.36□□□□□ -1.55
USP40-202ENST00000409945 MOKQ9UQ07 419 aa5.36□□□□□ -1.55
USP40-202ENST00000409945 ORC6Q9Y5N6 252 aa5.36□□□□□ -1.55
USP40-202ENST00000409945 POMT1Q9Y6A1 747 aa5.36□□□□□ -1.55
USP40-202ENST00000409945 ITPR3Q14573 2671 aa5.36□□□□□ -1.55
USP40-202ENST00000409945 HEATR1Q9H583 2144 aaKnown RBP5.36□□□□□ -1.55
USP40-202ENST00000409945 IGHV1-18A0A0C4DH31 117 aa5.35□□□□□ -1.55
USP40-202ENST00000409945 PLSCR5A0PG75 271 aa5.35□□□□□ -1.55
USP40-202ENST00000409945 SH3PXD2BA1X283 911 aa5.35□□□□□ -1.55
USP40-202ENST00000409945 NDUFB2O95178 105 aa5.35□□□□□ -1.55
USP40-202ENST00000409945 LYPD3O95274 346 aa5.35□□□□□ -1.55
USP40-202ENST00000409945 SNAP29O95721 258 aa5.35□□□□□ -1.55
USP40-202ENST00000409945 IGKV3-15P01624 115 aa5.35□□□□□ -1.55
USP40-202ENST00000409945 THY1P04216 161 aa5.35□□□□□ -1.55
USP40-202ENST00000409945 GNAO1P09471 354 aa5.35□□□□□ -1.55
USP40-202ENST00000409945 CSF3P09919 207 aa5.35□□□□□ -1.55
USP40-202ENST00000409945 PGA4P0DJD7 388 aa5.35□□□□□ -1.55
USP40-202ENST00000409945 PGA3P0DJD8 388 aa5.35□□□□□ -1.55
USP40-202ENST00000409945 B4GALT1P15291 398 aa5.35□□□□□ -1.55
USP40-202ENST00000409945 APLNRP35414 380 aa5.35□□□□□ -1.55
USP40-202ENST00000409945 ACVR1BP36896 505 aa5.35□□□□□ -1.55
USP40-202ENST00000409945 ARHGDIAP52565 204 aa5.35□□□□□ -1.55
USP40-202ENST00000409945 ESRRGP62508 458 aa5.35□□□□□ -1.55
USP40-202ENST00000409945 VLDLRP98155 873 aa5.35□□□□□ -1.55
USP40-202ENST00000409945 NAAAQ02083 359 aa5.35□□□□□ -1.55
USP40-202ENST00000409945 LGALS3BPQ08380 585 aa5.35□□□□□ -1.55
USP40-202ENST00000409945 MOGQ16653 247 aa5.35□□□□□ -1.55
USP40-202ENST00000409945 TBC1D28Q2M2D7 210 aa5.35□□□□□ -1.55
USP40-202ENST00000409945 ZBED5Q49AG3 693 aa5.35□□□□□ -1.55
USP40-202ENST00000409945 DNM1P34Q6PK57 102 aa5.35□□□□□ -1.55
USP40-202ENST00000409945 CORO6Q6QEF8 472 aa5.35□□□□□ -1.55
USP40-202ENST00000409945 ARL9Q6T311 187 aa5.35□□□□□ -1.55
USP40-202ENST00000409945 CLEC2AQ6UVW9 174 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms