RNA–Protein interactions for RNA: ENST00000409747.5

CBX3-203, Transcript of chromobox 3, humanhuman

TSL 1 (best) BASIC

Gene CBX3, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-203ENST00000409747 KLHDC2Q9Y2U9 406 aa12.14□□□□□ -0.47
CBX3-203ENST00000409747 TMEM14AQ9Y6G1 99 aa12.14□□□□□ -0.47
CBX3-203ENST00000409747 CLPSL1A2RUU4 121 aa12.14□□□□□ -0.47
CBX3-203ENST00000409747 FKBP6O75344 327 aa12.14□□□□□ -0.47
CBX3-203ENST00000409747 ZNF254O75437 659 aa12.14□□□□□ -0.47
CBX3-203ENST00000409747 IGHV4-59P01825 116 aa12.14□□□□□ -0.47
CBX3-203ENST00000409747 DCTDP32321 178 aa12.14□□□□□ -0.47
CBX3-203ENST00000409747 IER3P46695 156 aa12.14□□□□□ -0.47
CBX3-203ENST00000409747 GMFBP60983 142 aa12.14□□□□□ -0.47
CBX3-203ENST00000409747 GNG3P63215 75 aa12.14□□□□□ -0.47
CBX3-203ENST00000409747 APOFQ13790 326 aa12.14□□□□□ -0.47
CBX3-203ENST00000409747 SNAPC1Q16533 368 aa12.14□□□□□ -0.47
CBX3-203ENST00000409747 BRICD5Q6PL45 260 aa12.14□□□□□ -0.47
CBX3-203ENST00000409747 GDPGP1Q6ZNW5 385 aa12.14□□□□□ -0.47
CBX3-203ENST00000409747 ZNF788Q6ZQV5 615 aa12.14□□□□□ -0.47
CBX3-203ENST00000409747 COMMD2Q86X83 199 aa12.14□□□□□ -0.47
CBX3-203ENST00000409747 PDZD9Q8IXQ8 264 aa12.14□□□□□ -0.47
CBX3-203ENST00000409747 HS3ST5Q8IZT8 346 aa12.14□□□□□ -0.47
CBX3-203ENST00000409747 FGFRL1Q8N441 504 aa12.14□□□□□ -0.47
CBX3-203ENST00000409747 BBS1Q8NFJ9 593 aa12.14□□□□□ -0.47
CBX3-203ENST00000409747 OR5T2Q8NGG2 359 aa12.14□□□□□ -0.47
CBX3-203ENST00000409747 HPSE2Q8WWQ2 592 aa12.14□□□□□ -0.47
CBX3-203ENST00000409747 ASB17Q8WXJ9 295 aa12.14□□□□□ -0.47
CBX3-203ENST00000409747 SEH1LQ96EE3 360 aa12.14□□□□□ -0.47
CBX3-203ENST00000409747 NRBF2Q96F24 287 aa12.14□□□□□ -0.47
CBX3-203ENST00000409747 WDR13Q9H1Z4 485 aa12.14□□□□□ -0.47
CBX3-203ENST00000409747 PAPOLBQ9NRJ5 636 aaKnown RBP12.14□□□□□ -0.47
CBX3-203ENST00000409747 SNTG1Q9NSN8 517 aa12.14□□□□□ -0.47
CBX3-203ENST00000409747 SLC25A10Q9UBX3 287 aaPredicted RBP12.14□□□□□ -0.47
CBX3-203ENST00000409747 TMEM269A0A1B0GVZ9 245 aa12.13□□□□□ -0.47
CBX3-203ENST00000409747 OR5B21A6NL26 309 aa12.13□□□□□ -0.47
CBX3-203ENST00000409747 AKR7A2O43488 359 aa12.13□□□□□ -0.47
CBX3-203ENST00000409747 GPR137BO60478 399 aa12.13□□□□□ -0.47
CBX3-203ENST00000409747 PRKACGP22612 351 aa12.13□□□□□ -0.47
CBX3-203ENST00000409747 GLRA1P23415 457 aa12.13□□□□□ -0.47
CBX3-203ENST00000409747 GPM6AP51674 278 aa12.13□□□□□ -0.47
CBX3-203ENST00000409747 ELF3P78545 371 aaPredicted RBP12.13□□□□□ -0.47
CBX3-203ENST00000409747 RELBQ01201 579 aa12.13□□□□□ -0.47
CBX3-203ENST00000409747 ZNF829Q3KNS6 432 aaPredicted RBP12.13□□□□□ -0.47
CBX3-203ENST00000409747 ZBTB37Q5TC79 503 aa12.13□□□□□ -0.47
CBX3-203ENST00000409747 NCR3LG1Q68D85 454 aa12.13□□□□□ -0.47
CBX3-203ENST00000409747 KRT74Q7RTS7 529 aa12.13□□□□□ -0.47
CBX3-203ENST00000409747 TRPM8Q7Z2W7 1104 aa12.13□□□□□ -0.47
CBX3-203ENST00000409747 THAP5Q7Z6K1 395 aa12.13□□□□□ -0.47
CBX3-203ENST00000409747 PIP4P2Q8N4L2 257 aa12.13□□□□□ -0.47
CBX3-203ENST00000409747 GAFA1Q96PS6 74 aa12.13□□□□□ -0.47
CBX3-203ENST00000409747 SIRT7Q9NRC8 400 aa12.13□□□□□ -0.47
CBX3-203ENST00000409747 NLKQ9UBE8 527 aa12.13□□□□□ -0.47
CBX3-203ENST00000409747 TCRBV3S1A0A5B6 114 aa12.12□□□□□ -0.47
CBX3-203ENST00000409747 OR2AT4A6NND4 320 aa12.12□□□□□ -0.47
CBX3-203ENST00000409747 M0R1W7 72 aa12.12□□□□□ -0.47
CBX3-203ENST00000409747 SIGLEC5O15389 551 aa12.12□□□□□ -0.47
CBX3-203ENST00000409747 GSC2O15499 205 aa12.12□□□□□ -0.47
CBX3-203ENST00000409747 AMY2BP19961 511 aa12.12□□□□□ -0.47
CBX3-203ENST00000409747 CAV3P56539 151 aa12.12□□□□□ -0.47
CBX3-203ENST00000409747 ROM1Q03395 351 aa12.12□□□□□ -0.47
CBX3-203ENST00000409747 BLMHQ13867 455 aa12.12□□□□□ -0.47
CBX3-203ENST00000409747 CEACAM21Q3KPI0 293 aa12.12□□□□□ -0.47
CBX3-203ENST00000409747 TMEM236Q5W0B7 351 aa12.12□□□□□ -0.47
CBX3-203ENST00000409747 C1orf122Q6ZSJ8 110 aa12.12□□□□□ -0.47
CBX3-203ENST00000409747 ANGPTL6Q8NI99 470 aa12.12□□□□□ -0.47
CBX3-203ENST00000409747 ZNF671Q8TAW3 534 aa12.12□□□□□ -0.47
CBX3-203ENST00000409747 TEAD3Q99594 435 aa12.12□□□□□ -0.47
CBX3-203ENST00000409747 FAM206AQ9NX38 181 aa12.12□□□□□ -0.47
CBX3-203ENST00000409747 TVP23BQ9NYZ1 205 aa12.12□□□□□ -0.47
CBX3-203ENST00000409747 A0A1W2PQ09 198 aa12.11□□□□□ -0.47
CBX3-203ENST00000409747 TIMM23O14925 209 aa12.11□□□□□ -0.47
CBX3-203ENST00000409747 MTRF1O75570 445 aaKnown RBP12.11□□□□□ -0.47
CBX3-203ENST00000409747 PAHP00439 452 aa12.11□□□□□ -0.47
CBX3-203ENST00000409747 ACAA1P09110 424 aaPredicted RBP12.11□□□□□ -0.47
CBX3-203ENST00000409747 NDUFB7P17568 137 aa12.11□□□□□ -0.47
CBX3-203ENST00000409747 RIDAP52758 137 aaKnown RBP12.11□□□□□ -0.47
CBX3-203ENST00000409747 CRISP1P54107 249 aa12.11□□□□□ -0.47
CBX3-203ENST00000409747 RIPPLY1Q0D2K3 151 aa12.11□□□□□ -0.47
CBX3-203ENST00000409747 OCLNQ16625 522 aa12.11□□□□□ -0.47
CBX3-203ENST00000409747 DGUOKQ16854 277 aa12.11□□□□□ -0.47
CBX3-203ENST00000409747 ZNF679Q8IYX0 411 aa12.11□□□□□ -0.47
CBX3-203ENST00000409747 OR5A2Q8NGI9 324 aa12.11□□□□□ -0.47
CBX3-203ENST00000409747 CITED1Q99966 193 aa12.11□□□□□ -0.47
CBX3-203ENST00000409747 FGF23Q9GZV9 251 aaPredicted RBP12.11□□□□□ -0.47
CBX3-203ENST00000409747 PBOV1Q9GZY1 135 aa12.11□□□□□ -0.47
CBX3-203ENST00000409747 OR51I2Q9H344 312 aa12.11□□□□□ -0.47
CBX3-203ENST00000409747 METTL8Q9H825 291 aaKnown RBP12.11□□□□□ -0.47
CBX3-203ENST00000409747 ZNRD1Q9P1U0 126 aa12.11□□□□□ -0.47
CBX3-203ENST00000409747 RNF114Q9Y508 228 aa12.11□□□□□ -0.47
CBX3-203ENST00000409747 TRBV23-1A0A0A0MS06 115 aa12.11□□□□□ -0.47
CBX3-203ENST00000409747 ZNF732B4DXR9 585 aa12.11□□□□□ -0.47
CBX3-203ENST00000409747 M0QZ24 198 aa12.11□□□□□ -0.47
CBX3-203ENST00000409747 NPFFO15130 113 aa12.11□□□□□ -0.47
CBX3-203ENST00000409747 MRPL3P09001 348 aaKnown RBP12.11□□□□□ -0.47
CBX3-203ENST00000409747 SELLP14151 372 aa12.11□□□□□ -0.47
CBX3-203ENST00000409747 ESRRGP62508 458 aa12.11□□□□□ -0.47
CBX3-203ENST00000409747 CEP78Q5JTW2 689 aa12.11□□□□□ -0.47
CBX3-203ENST00000409747 Q8N7P7 452 aa12.11□□□□□ -0.47
CBX3-203ENST00000409747 OR8B4Q96RC9 309 aa12.11□□□□□ -0.47
CBX3-203ENST00000409747 CNN2Q99439 309 aaKnown RBP12.11□□□□□ -0.47
CBX3-203ENST00000409747 MNTQ99583 582 aa12.11□□□□□ -0.47
CBX3-203ENST00000409747 MOB1AQ9H8S9 216 aa12.11□□□□□ -0.47
CBX3-203ENST00000409747 RASL12Q9NYN1 266 aa12.11□□□□□ -0.47
CBX3-203ENST00000409747 ENPP5Q9UJA9 477 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms