RNA–Protein interactions for RNA: ENST00000409050.1

SCN1A-203, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1A, Length 5,946 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-203ENST00000409050 SEC11BP0C7V7 166 aa5.48□□□□□ -1.53
SCN1A-203ENST00000409050 CD96P40200 585 aa5.48□□□□□ -1.53
SCN1A-203ENST00000409050 OR5I1Q13606 314 aa5.48□□□□□ -1.53
SCN1A-203ENST00000409050 MEX3DQ86XN8 651 aaKnown RBP5.48□□□□□ -1.53
SCN1A-203ENST00000409050 SPEM1Q8N4L4 309 aa5.48□□□□□ -1.53
SCN1A-203ENST00000409050 OR13G1Q8NGZ3 307 aa5.48□□□□□ -1.53
SCN1A-203ENST00000409050 RPS4Y2Q8TD47 263 aa5.48□□□□□ -1.53
SCN1A-203ENST00000409050 THOC3Q96J01 351 aaKnown RBP5.48□□□□□ -1.53
SCN1A-203ENST00000409050 FAM210BQ96KR6 192 aa5.48□□□□□ -1.53
SCN1A-203ENST00000409050 TEX37Q96LM6 180 aa5.48□□□□□ -1.53
SCN1A-203ENST00000409050 COL25A1Q9BXS0 654 aaPredicted RBP5.48□□□□□ -1.53
SCN1A-203ENST00000409050 PLA2G12AQ9BZM1 189 aa5.48□□□□□ -1.53
SCN1A-203ENST00000409050 PARP11Q9NR21 331 aa5.48□□□□□ -1.53
SCN1A-203ENST00000409050 BAZ2AQ9UIF9 1905 aaKnown RBP5.47□□□□□ -1.53
SCN1A-203ENST00000409050 hADV38S2A0JD32 116 aa5.47□□□□□ -1.53
SCN1A-203ENST00000409050 MAP1LC3B2A6NCE7 125 aa5.47□□□□□ -1.53
SCN1A-203ENST00000409050 IFNL4K9M1U5 179 aa5.47□□□□□ -1.53
SCN1A-203ENST00000409050 MASP2O00187 686 aa5.47□□□□□ -1.53
SCN1A-203ENST00000409050 SOCS7O14512 581 aa5.47□□□□□ -1.53
SCN1A-203ENST00000409050 GPANK1O95872 356 aa5.47□□□□□ -1.53
SCN1A-203ENST00000409050 NTF3P20783 257 aa5.47□□□□□ -1.53
SCN1A-203ENST00000409050 RPS4Y1P22090 263 aaKnown RBP5.47□□□□□ -1.53
SCN1A-203ENST00000409050 COMPP49747 757 aaPredicted RBP5.47□□□□□ -1.53
SCN1A-203ENST00000409050 GNG4P50150 75 aa5.47□□□□□ -1.53
SCN1A-203ENST00000409050 ATP5IP56385 69 aaPredicted RBP5.47□□□□□ -1.53
SCN1A-203ENST00000409050 PAFAH1B2P68402 229 aa5.47□□□□□ -1.53
SCN1A-203ENST00000409050 OR2C3Q8N628 320 aa5.47□□□□□ -1.53
SCN1A-203ENST00000409050 OR4S2Q8NH73 311 aa5.47□□□□□ -1.53
SCN1A-203ENST00000409050 DNAJA3Q96EY1 480 aa5.47□□□□□ -1.53
SCN1A-203ENST00000409050 MAP1LC3BQ9GZQ8 125 aa5.47□□□□□ -1.53
SCN1A-203ENST00000409050 FGF22Q9HCT0 170 aa5.47□□□□□ -1.53
SCN1A-203ENST00000409050 MRPS18AQ9NVS2 196 aaKnown RBP5.47□□□□□ -1.53
SCN1A-203ENST00000409050 HSPB8Q9UJY1 196 aa5.47□□□□□ -1.53
SCN1A-203ENST00000409050 MYH10P35580 1976 aa5.47□□□□□ -1.53
SCN1A-203ENST00000409050 SLC22A20A6NK97 555 aa5.47□□□□□ -1.53
SCN1A-203ENST00000409050 LMO7DNF2Z398 122 aa5.47□□□□□ -1.53
SCN1A-203ENST00000409050 CCSO14618 274 aa5.47□□□□□ -1.53
SCN1A-203ENST00000409050 GEMIN2O14893 280 aaKnown RBP5.47□□□□□ -1.53
SCN1A-203ENST00000409050 GPR37O15354 613 aa5.47□□□□□ -1.53
SCN1A-203ENST00000409050 SRFP11831 508 aa5.47□□□□□ -1.53
SCN1A-203ENST00000409050 HIST1H1BP16401 226 aaKnown RBP5.47□□□□□ -1.53
SCN1A-203ENST00000409050 DCTDP32321 178 aa5.47□□□□□ -1.53
SCN1A-203ENST00000409050 ZNF121P58317 390 aaPredicted RBP5.47□□□□□ -1.53
SCN1A-203ENST00000409050 EDDM3AQ14507 147 aa5.47□□□□□ -1.53
SCN1A-203ENST00000409050 COL19A1Q14993 1142 aa5.47□□□□□ -1.53
SCN1A-203ENST00000409050 ELOBQ15370 118 aa5.47□□□□□ -1.53
SCN1A-203ENST00000409050 ZNF385BQ569K4 471 aa5.47□□□□□ -1.53
SCN1A-203ENST00000409050 TMEM123Q8N131 208 aa5.47□□□□□ -1.53
SCN1A-203ENST00000409050 RELL2Q8NC24 303 aaPredicted RBP5.47□□□□□ -1.53
SCN1A-203ENST00000409050 OR4D10Q8NGI6 311 aa5.47□□□□□ -1.53
SCN1A-203ENST00000409050 MARVELD3Q96A59 401 aa5.47□□□□□ -1.53
SCN1A-203ENST00000409050 OR2A5Q96R48 311 aa5.47□□□□□ -1.53
SCN1A-203ENST00000409050 MACROD1Q9BQ69 325 aa5.47□□□□□ -1.53
SCN1A-203ENST00000409050 TBX21Q9UL17 535 aa5.47□□□□□ -1.53
SCN1A-203ENST00000409050 MMP24Q9Y5R2 645 aa5.47□□□□□ -1.53
SCN1A-203ENST00000409050 MYH7P12883 1935 aa5.47□□□□□ -1.53
SCN1A-203ENST00000409050 C9orf170A2RU37 121 aa5.47□□□□□ -1.53
SCN1A-203ENST00000409050 MKRN2OSH3BPM6 223 aa5.47□□□□□ -1.53
SCN1A-203ENST00000409050 MFNGO00587 321 aa5.47□□□□□ -1.53
SCN1A-203ENST00000409050 PHOX2AO14813 284 aa5.47□□□□□ -1.53
SCN1A-203ENST00000409050 MPC2O95563 127 aa5.47□□□□□ -1.53
SCN1A-203ENST00000409050 CDC34P49427 236 aaPredicted RBP5.47□□□□□ -1.53
SCN1A-203ENST00000409050 DEFB103AP81534 67 aa5.47□□□□□ -1.53
SCN1A-203ENST00000409050 FAM3AP98173 230 aa5.47□□□□□ -1.53
SCN1A-203ENST00000409050 GSG1Q2KHT4 349 aa5.47□□□□□ -1.53
SCN1A-203ENST00000409050 PABPC1L2AQ5JQF8 200 aa5.47□□□□□ -1.53
SCN1A-203ENST00000409050 LIAT1Q6ZQX7 453 aa5.47□□□□□ -1.53
SCN1A-203ENST00000409050 SLC16A12Q6ZSM3 486 aa5.47□□□□□ -1.53
SCN1A-203ENST00000409050 OR10V1Q8NGI7 309 aa5.47□□□□□ -1.53
SCN1A-203ENST00000409050 NUDCD2Q8WVJ2 157 aa5.47□□□□□ -1.53
SCN1A-203ENST00000409050 FAAP24Q9BTP7 215 aa5.47□□□□□ -1.53
SCN1A-203ENST00000409050 C1RLQ9NZP8 487 aa5.47□□□□□ -1.53
SCN1A-203ENST00000409050 URGCP-MRPS24S4R325 110 aa5.47□□□□□ -1.53
SCN1A-203ENST00000409050 KAT6AQ92794 2004 aa5.47□□□□□ -1.53
SCN1A-203ENST00000409050 C4BP0C0L5 1744 aa5.47□□□□□ -1.53
SCN1A-203ENST00000409050 IGSF23A1L1A6 192 aa5.47□□□□□ -1.53
SCN1A-203ENST00000409050 CDRT15L2A8MXV6 281 aa5.47□□□□□ -1.53
SCN1A-203ENST00000409050 PRICKLE3O43900 615 aaPredicted RBP5.47□□□□□ -1.53
SCN1A-203ENST00000409050 SEMA7AO75326 666 aa5.47□□□□□ -1.53
SCN1A-203ENST00000409050 EPHA2P29317 976 aa5.47□□□□□ -1.53
SCN1A-203ENST00000409050 MEOX2P50222 304 aa5.47□□□□□ -1.53
SCN1A-203ENST00000409050 ERV3-1Q14264 604 aa5.47□□□□□ -1.53
SCN1A-203ENST00000409050 OR5M10Q6IEU7 315 aa5.47□□□□□ -1.53
SCN1A-203ENST00000409050 CLEC9AQ6UXN8 241 aa5.47□□□□□ -1.53
SCN1A-203ENST00000409050 ZNF66Q6ZN08 573 aa5.47□□□□□ -1.53
SCN1A-203ENST00000409050 MRGPRGQ86SM5 289 aa5.47□□□□□ -1.53
SCN1A-203ENST00000409050 MYPOPQ86VE0 399 aaPredicted RBP5.47□□□□□ -1.53
SCN1A-203ENST00000409050 UBALD1Q8TB05 177 aa5.47□□□□□ -1.53
SCN1A-203ENST00000409050 NUBPLQ8TB37 319 aa5.47□□□□□ -1.53
SCN1A-203ENST00000409050 CMBLQ96DG6 245 aa5.47□□□□□ -1.53
SCN1A-203ENST00000409050 MS4A10Q96PG2 267 aa5.47□□□□□ -1.53
SCN1A-203ENST00000409050 TPPP3Q9BW30 176 aa5.47□□□□□ -1.53
SCN1A-203ENST00000409050 PITPNC1Q9UKF7 332 aa5.47□□□□□ -1.53
SCN1A-203ENST00000409050 ICOSLGO75144 302 aa5.47□□□□□ -1.53
SCN1A-203ENST00000409050 MPDU1O75352 247 aa5.47□□□□□ -1.53
SCN1A-203ENST00000409050 EPPINO95925 133 aa5.47□□□□□ -1.53
SCN1A-203ENST00000409050 BTF3P20290 206 aaKnown RBP5.47□□□□□ -1.53
SCN1A-203ENST00000409050 OR10J1P30954 320 aa5.47□□□□□ -1.53
SCN1A-203ENST00000409050 CRYBB2P43320 205 aa5.47□□□□□ -1.53
SCN1A-203ENST00000409050 PPIAP62937 165 aaKnown RBP5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms