RNA–Protein interactions for RNA: ENST00000405546.7

ATG4B-206, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2 BASIC

Gene ATG4B, Length 3,294 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-206ENST00000405546 ZNF561Q8N587 486 aa13.29□□□□□ -0.28
ATG4B-206ENST00000405546 MARS2Q96GW9 593 aaKnown RBP13.29□□□□□ -0.28
ATG4B-206ENST00000405546 TAF9BQ9HBM6 251 aa13.29□□□□□ -0.28
ATG4B-206ENST00000405546 RCL1Q9Y2P8 373 aaKnown RBP13.29□□□□□ -0.28
ATG4B-206ENST00000405546 ANKUB1A6NFN9 424 aa13.28□□□□□ -0.28
ATG4B-206ENST00000405546 ZNF205O95201 554 aa13.28□□□□□ -0.28
ATG4B-206ENST00000405546 NDUFB7P17568 137 aa13.28□□□□□ -0.28
ATG4B-206ENST00000405546 SSX9Q7RTT3 188 aa13.28□□□□□ -0.28
ATG4B-206ENST00000405546 ZNF565Q8N9K5 539 aa13.28□□□□□ -0.28
ATG4B-206ENST00000405546 PNLDC1Q8NA58 520 aaKnown RBP13.28□□□□□ -0.28
ATG4B-206ENST00000405546 OR10C1Q96KK4 312 aa13.28□□□□□ -0.28
ATG4B-206ENST00000405546 CSRP1P21291 193 aaKnown RBP13.28□□□□□ -0.28
ATG4B-206ENST00000405546 CXCL12P48061 93 aa13.28□□□□□ -0.28
ATG4B-206ENST00000405546 GFI1BQ5VTD9 330 aa13.28□□□□□ -0.28
ATG4B-206ENST00000405546 C17orf82Q86X59 251 aaPredicted RBP13.28□□□□□ -0.28
ATG4B-206ENST00000405546 TMEM229BQ8NBD8 167 aa13.28□□□□□ -0.28
ATG4B-206ENST00000405546 OR5L2Q8NGL0 311 aa13.28□□□□□ -0.28
ATG4B-206ENST00000405546 MFSD8Q8NHS3 518 aa13.28□□□□□ -0.28
ATG4B-206ENST00000405546 G6PC2Q9NQR9 355 aa13.28□□□□□ -0.28
ATG4B-206ENST00000405546 PLA2G2EQ9NZK7 142 aa13.28□□□□□ -0.28
ATG4B-206ENST00000405546 GDF2Q9UK05 429 aaPredicted RBP13.28□□□□□ -0.28
ATG4B-206ENST00000405546 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.28□□□□□ -0.28
ATG4B-206ENST00000405546 RAB5AP20339 215 aa13.28□□□□□ -0.28
ATG4B-206ENST00000405546 CCL7P80098 99 aa13.28□□□□□ -0.28
ATG4B-206ENST00000405546 ACY1Q03154 408 aa13.28□□□□□ -0.28
ATG4B-206ENST00000405546 KIAA0141Q14154 515 aaPredicted RBP13.28□□□□□ -0.28
ATG4B-206ENST00000405546 PTCRAQ6ISU1 281 aaPredicted RBP13.28□□□□□ -0.28
ATG4B-206ENST00000405546 OR10D4PQ8NGN7 298 aa13.28□□□□□ -0.28
ATG4B-206ENST00000405546 ST8SIA1Q92185 356 aa13.28□□□□□ -0.28
ATG4B-206ENST00000405546 ST6GALNAC5Q9BVH7 336 aa13.28□□□□□ -0.28
ATG4B-206ENST00000405546 WDFY4Q6ZS81 3184 aa13.27□□□□□ -0.28
ATG4B-206ENST00000405546 WIPF3A6NGB9 483 aa13.27□□□□□ -0.28
ATG4B-206ENST00000405546 FTCDNL1E5RQL4 147 aa13.27□□□□□ -0.28
ATG4B-206ENST00000405546 H3BMH7 237 aa13.27□□□□□ -0.28
ATG4B-206ENST00000405546 EFSO43281 561 aa13.27□□□□□ -0.28
ATG4B-206ENST00000405546 CRTAPO75718 401 aaPredicted RBP13.27□□□□□ -0.28
ATG4B-206ENST00000405546 ZFAND5O76080 213 aa13.27□□□□□ -0.28
ATG4B-206ENST00000405546 KLK2P20151 261 aa13.27□□□□□ -0.28
ATG4B-206ENST00000405546 GSK3AP49840 483 aa13.27□□□□□ -0.28
ATG4B-206ENST00000405546 GLIPR1L1Q6UWM5 242 aa13.27□□□□□ -0.28
ATG4B-206ENST00000405546 ZNF574Q6ZN55 896 aaPredicted RBP13.27□□□□□ -0.28
ATG4B-206ENST00000405546 SLC25A42Q86VD7 318 aa13.27□□□□□ -0.28
ATG4B-206ENST00000405546 SKA3Q8IX90 412 aa13.27□□□□□ -0.28
ATG4B-206ENST00000405546 PLPP5Q8NEB5 264 aa13.27□□□□□ -0.28
ATG4B-206ENST00000405546 MITD1Q8WV92 249 aa13.27□□□□□ -0.28
ATG4B-206ENST00000405546 BSCL2Q96G97 398 aaPredicted RBP13.27□□□□□ -0.28
ATG4B-206ENST00000405546 TOLLIPQ9H0E2 274 aa13.27□□□□□ -0.28
ATG4B-206ENST00000405546 ALX4Q9H161 411 aaPredicted RBP13.27□□□□□ -0.28
ATG4B-206ENST00000405546 RFNGQ9Y644 331 aa13.27□□□□□ -0.28
ATG4B-206ENST00000405546 A0A1W2PP11 408 aa13.27□□□□□ -0.29
ATG4B-206ENST00000405546 MASP2O00187 686 aa13.27□□□□□ -0.29
ATG4B-206ENST00000405546 RAMP1O60894 148 aa13.27□□□□□ -0.29
ATG4B-206ENST00000405546 IFNA2P01563 188 aa13.27□□□□□ -0.29
ATG4B-206ENST00000405546 QDPRP09417 244 aa13.27□□□□□ -0.29
ATG4B-206ENST00000405546 JMJD7P0C870 316 aa13.27□□□□□ -0.29
ATG4B-206ENST00000405546 PRSS12P56730 875 aa13.27□□□□□ -0.29
ATG4B-206ENST00000405546 HGFACQ04756 655 aa13.27□□□□□ -0.29
ATG4B-206ENST00000405546 CHAF1BQ13112 559 aa13.27□□□□□ -0.29
ATG4B-206ENST00000405546 RHBDD2Q6NTF9 364 aa13.27□□□□□ -0.29
ATG4B-206ENST00000405546 CCDC54Q8NEL0 328 aa13.27□□□□□ -0.29
ATG4B-206ENST00000405546 NICN1Q9BSH3 213 aa13.27□□□□□ -0.29
ATG4B-206ENST00000405546 UNKLQ9H9P5 680 aaKnown RBP13.27□□□□□ -0.29
ATG4B-206ENST00000405546 GPR84Q9NQS5 396 aa13.27□□□□□ -0.29
ATG4B-206ENST00000405546 LSM5Q9Y4Y9 91 aaKnown RBP13.27□□□□□ -0.29
ATG4B-206ENST00000405546 HSPB2A8KAH6 182 aa13.26□□□□□ -0.29
ATG4B-206ENST00000405546 SLC33A1O00400 549 aaPredicted RBP13.26□□□□□ -0.29
ATG4B-206ENST00000405546 IGHG1P01857 330 aa13.26□□□□□ -0.29
ATG4B-206ENST00000405546 TTRP02766 147 aa13.26□□□□□ -0.29
ATG4B-206ENST00000405546 CELA2AP08217 269 aa13.26□□□□□ -0.29
ATG4B-206ENST00000405546 CLDN17P56750 224 aa13.26□□□□□ -0.29
ATG4B-206ENST00000405546 HSPB2Q16082 182 aa13.26□□□□□ -0.29
ATG4B-206ENST00000405546 RNF212Q495C1 297 aa13.26□□□□□ -0.29
ATG4B-206ENST00000405546 C4orf17Q53FE4 359 aa13.26□□□□□ -0.29
ATG4B-206ENST00000405546 ZNF343Q6P1L6 599 aa13.26□□□□□ -0.29
ATG4B-206ENST00000405546 FIP1L1Q6UN15 594 aaKnown RBP13.26□□□□□ -0.29
ATG4B-206ENST00000405546 SLC30A7Q8NEW0 376 aa13.26□□□□□ -0.29
ATG4B-206ENST00000405546 KCNK17Q96T54 332 aa13.26□□□□□ -0.29
ATG4B-206ENST00000405546 RBM24Q9BX46 236 aaKnown RBP13.26□□□□□ -0.29
ATG4B-206ENST00000405546 CACFD1Q9UGQ2 172 aa13.26□□□□□ -0.29
ATG4B-206ENST00000405546 TEX13DA0A0J9YY54 714 aaPredicted RBP13.26□□□□□ -0.29
ATG4B-206ENST00000405546 LIPT2A6NK58 231 aa13.26□□□□□ -0.29
ATG4B-206ENST00000405546 EFNA2O43921 213 aa13.26□□□□□ -0.29
ATG4B-206ENST00000405546 TMEM127O75204 238 aa13.26□□□□□ -0.29
ATG4B-206ENST00000405546 PRH1P02810 166 aa13.26□□□□□ -0.29
ATG4B-206ENST00000405546 MIDNQ504T8 468 aa13.26□□□□□ -0.29
ATG4B-206ENST00000405546 RAET1LQ5VY80 246 aa13.26□□□□□ -0.29
ATG4B-206ENST00000405546 CPEB2Q7Z5Q1 589 aaKnown RBP13.26□□□□□ -0.29
ATG4B-206ENST00000405546 S100A13Q99584 98 aa13.26□□□□□ -0.29
ATG4B-206ENST00000405546 SMOC1Q9H4F8 434 aa13.26□□□□□ -0.29
ATG4B-206ENST00000405546 SEBOXQ9HB31 216 aaPredicted RBP13.26□□□□□ -0.29
ATG4B-206ENST00000405546 MYOTQ9UBF9 498 aa13.26□□□□□ -0.29
ATG4B-206ENST00000405546 RAB22AQ9UL26 194 aa13.26□□□□□ -0.29
ATG4B-206ENST00000405546 LRP4O75096 1905 aa13.26□□□□□ -0.29
ATG4B-206ENST00000405546 TSPAN15O95858 294 aa13.26□□□□□ -0.29
ATG4B-206ENST00000405546 FBP1P09467 338 aa13.26□□□□□ -0.29
ATG4B-206ENST00000405546 GABREP78334 506 aa13.26□□□□□ -0.29
ATG4B-206ENST00000405546 USF2Q15853 346 aaPredicted RBP13.26□□□□□ -0.29
ATG4B-206ENST00000405546 C10orf91Q5T1B1 145 aa13.26□□□□□ -0.29
ATG4B-206ENST00000405546 FDX2Q6P4F2 183 aa13.26□□□□□ -0.29
ATG4B-206ENST00000405546 DNM1P46Q6ZS02 220 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms