RNA–Protein interactions for RNA: ENST00000403408.2

SPTLC1P3-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 3, humanhuman

BASIC

Gene SPTLC1P3, Length 259 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P3-201ENST00000403408 CX3CR1P49238 355 aa9.51□□□□□ -0.89
SPTLC1P3-201ENST00000403408 SLC25A1P53007 311 aa9.51□□□□□ -0.89
SPTLC1P3-201ENST00000403408 LIPEQ05469 1076 aa9.51□□□□□ -0.89
SPTLC1P3-201ENST00000403408 KHDRBS1Q07666 443 aaKnown RBP eCLIP9.51□□□□□ -0.89
SPTLC1P3-201ENST00000403408 C18orf65Q6ZTR6 163 aa9.51□□□□□ -0.89
SPTLC1P3-201ENST00000403408 RNF144BQ7Z419 303 aa9.51□□□□□ -0.89
SPTLC1P3-201ENST00000403408 CD177Q8N6Q3 437 aa9.51□□□□□ -0.89
SPTLC1P3-201ENST00000403408 TMEM185AQ8NFB2 350 aa9.51□□□□□ -0.89
SPTLC1P3-201ENST00000403408 OR4M1Q8NGD0 313 aa9.51□□□□□ -0.89
SPTLC1P3-201ENST00000403408 SDSLQ96GA7 329 aa9.51□□□□□ -0.89
SPTLC1P3-201ENST00000403408 IFT27Q9BW83 186 aa9.51□□□□□ -0.89
SPTLC1P3-201ENST00000403408 PAPOLGQ9BWT3 736 aaKnown RBP9.51□□□□□ -0.89
SPTLC1P3-201ENST00000403408 NSRP1Q9H0G5 558 aaKnown RBP9.51□□□□□ -0.89
SPTLC1P3-201ENST00000403408 OPA3Q9H6K4 179 aa9.51□□□□□ -0.89
SPTLC1P3-201ENST00000403408 PCDHGB5Q9Y5G0 923 aa9.51□□□□□ -0.89
SPTLC1P3-201ENST00000403408 A0A0G2JND7 137 aa9.5□□□□□ -0.89
SPTLC1P3-201ENST00000403408 TCRBV4S1A1TA0A5B7 111 aa9.5□□□□□ -0.89
SPTLC1P3-201ENST00000403408 DHRS12A0PJE2 317 aa9.5□□□□□ -0.89
SPTLC1P3-201ENST00000403408 MEX3AA1L020 520 aaKnown RBP9.5□□□□□ -0.89
SPTLC1P3-201ENST00000403408 SH2D7A6NKC9 451 aaPredicted RBP9.5□□□□□ -0.89
SPTLC1P3-201ENST00000403408 C3orf84H3BNL1 204 aa9.5□□□□□ -0.89
SPTLC1P3-201ENST00000403408 NME4O00746 187 aa9.5□□□□□ -0.89
SPTLC1P3-201ENST00000403408 NPPAP01160 153 aa9.5□□□□□ -0.89
SPTLC1P3-201ENST00000403408 PF4P02776 101 aa9.5□□□□□ -0.89
SPTLC1P3-201ENST00000403408 CHRM2P08172 466 aa9.5□□□□□ -0.89
SPTLC1P3-201ENST00000403408 SPARCP09486 303 aa9.5□□□□□ -0.89
SPTLC1P3-201ENST00000403408 ZNF823P16415 610 aa9.5□□□□□ -0.89
SPTLC1P3-201ENST00000403408 SLC6A6P31641 620 aa9.5□□□□□ -0.89
SPTLC1P3-201ENST00000403408 CEBPDP49716 269 aaPredicted RBP9.5□□□□□ -0.89
SPTLC1P3-201ENST00000403408 SPIBQ01892 262 aa9.5□□□□□ -0.89
SPTLC1P3-201ENST00000403408 SF3A3Q12874 501 aaKnown RBP eCLIP9.5□□□□□ -0.89
SPTLC1P3-201ENST00000403408 PRDX4Q13162 271 aa9.5□□□□□ -0.89
SPTLC1P3-201ENST00000403408 SSX2Q16385 188 aa9.5□□□□□ -0.89
SPTLC1P3-201ENST00000403408 FAM57BQ71RH2 274 aa9.5□□□□□ -0.89
SPTLC1P3-201ENST00000403408 FKBP9P1Q75LS8 142 aa9.5□□□□□ -0.89
SPTLC1P3-201ENST00000403408 MRPL41Q8IXM3 137 aaKnown RBP9.5□□□□□ -0.89
SPTLC1P3-201ENST00000403408 MICU1Q9BPX6 476 aa9.5□□□□□ -0.89
SPTLC1P3-201ENST00000403408 HEXA-AS1Q9H8Q6 139 aa9.5□□□□□ -0.89
SPTLC1P3-201ENST00000403408 SAR1AQ9NR31 198 aa9.5□□□□□ -0.89
SPTLC1P3-201ENST00000403408 LSM4Q9Y4Z0 139 aaKnown RBP9.5□□□□□ -0.89
SPTLC1P3-201ENST00000403408 TSSC4Q9Y5U2 329 aaPredicted RBP9.5□□□□□ -0.89
SPTLC1P3-201ENST00000403408 FAM90A22PA8MWA6 464 aa9.49□□□□□ -0.89
SPTLC1P3-201ENST00000403408 E9PQ18 207 aa9.49□□□□□ -0.89
SPTLC1P3-201ENST00000403408 ZNF593O00488 134 aaPredicted RBP9.49□□□□□ -0.89
SPTLC1P3-201ENST00000403408 EDF1O60869 148 aaKnown RBP9.49□□□□□ -0.89
SPTLC1P3-201ENST00000403408 GYPBP06028 91 aa9.49□□□□□ -0.89
SPTLC1P3-201ENST00000403408 ANXA2P07355 339 aaKnown RBP9.49□□□□□ -0.89
SPTLC1P3-201ENST00000403408 CLUP10909 449 aa9.49□□□□□ -0.89
SPTLC1P3-201ENST00000403408 GLRA1P23415 457 aa9.49□□□□□ -0.89
SPTLC1P3-201ENST00000403408 GSSP48637 474 aa9.49□□□□□ -0.89
SPTLC1P3-201ENST00000403408 ZNF121P58317 390 aaPredicted RBP9.49□□□□□ -0.89
SPTLC1P3-201ENST00000403408 RPL31P62899 125 aaKnown RBP9.49□□□□□ -0.89
SPTLC1P3-201ENST00000403408 TIGD6Q17RP2 521 aa9.49□□□□□ -0.89
SPTLC1P3-201ENST00000403408 GFOD2Q3B7J2 385 aa9.49□□□□□ -0.89
SPTLC1P3-201ENST00000403408 CASC10Q5T4H9 136 aa9.49□□□□□ -0.89
SPTLC1P3-201ENST00000403408 METTL21CQ5VZV1 264 aa9.49□□□□□ -0.89
SPTLC1P3-201ENST00000403408 PROKR2Q8NFJ6 384 aa9.49□□□□□ -0.89
SPTLC1P3-201ENST00000403408 OR8D4Q8NGM9 314 aa9.49□□□□□ -0.89
SPTLC1P3-201ENST00000403408 RPS4Y2Q8TD47 263 aa9.49□□□□□ -0.89
SPTLC1P3-201ENST00000403408 RCN3Q96D15 328 aa9.49□□□□□ -0.89
SPTLC1P3-201ENST00000403408 RNF170Q96K19 258 aa9.49□□□□□ -0.89
SPTLC1P3-201ENST00000403408 ZNF488Q96MN9 340 aa9.49□□□□□ -0.89
SPTLC1P3-201ENST00000403408 ASCL2Q99929 193 aa9.49□□□□□ -0.89
SPTLC1P3-201ENST00000403408 OR51I2Q9H344 312 aa9.49□□□□□ -0.89
SPTLC1P3-201ENST00000403408 EGLN3Q9H6Z9 239 aa9.49□□□□□ -0.89
SPTLC1P3-201ENST00000403408 DNAJC27Q9NZQ0 273 aa9.49□□□□□ -0.89
SPTLC1P3-201ENST00000403408 HERC2O95714 4834 aa9.49□□□□□ -0.89
SPTLC1P3-201ENST00000403408 SORL1Q92673 2214 aa9.48□□□□□ -0.89
SPTLC1P3-201ENST00000403408 RFPL4AA6NLU0 287 aa9.48□□□□□ -0.89
SPTLC1P3-201ENST00000403408 BBIP1A8MTZ0 92 aa9.48□□□□□ -0.89
SPTLC1P3-201ENST00000403408 C17orf98A8MV24 154 aa9.48□□□□□ -0.89
SPTLC1P3-201ENST00000403408 ZNF878C9JN71 531 aa9.48□□□□□ -0.89
SPTLC1P3-201ENST00000403408 RFPL4AL1F8VTS6 287 aa9.48□□□□□ -0.89
SPTLC1P3-201ENST00000403408 PEX14O75381 377 aa9.48□□□□□ -0.89
SPTLC1P3-201ENST00000403408 MTRF1O75570 445 aaKnown RBP9.48□□□□□ -0.89
SPTLC1P3-201ENST00000403408 DUS4LO95620 317 aaKnown RBP9.48□□□□□ -0.89
SPTLC1P3-201ENST00000403408 CST4P01036 141 aa9.48□□□□□ -0.89
SPTLC1P3-201ENST00000403408 AMY1AP04745 511 aa9.48□□□□□ -0.89
SPTLC1P3-201ENST00000403408 AMY2AP04746 511 aa9.48□□□□□ -0.89
SPTLC1P3-201ENST00000403408 ARG1P05089 322 aa9.48□□□□□ -0.89
SPTLC1P3-201ENST00000403408 RHCEP18577 417 aa9.48□□□□□ -0.89
SPTLC1P3-201ENST00000403408 GNALP38405 381 aa9.48□□□□□ -0.89
SPTLC1P3-201ENST00000403408 ENTPD1P49961 510 aa9.48□□□□□ -0.89
SPTLC1P3-201ENST00000403408 LGALS4P56470 323 aa9.48□□□□□ -0.89
SPTLC1P3-201ENST00000403408 IL5RAQ01344 420 aa9.48□□□□□ -0.89
SPTLC1P3-201ENST00000403408 KIAA2026Q5HYC2 2103 aa9.48□□□□□ -0.89
SPTLC1P3-201ENST00000403408 TEX30Q5JUR7 227 aa9.48□□□□□ -0.89
SPTLC1P3-201ENST00000403408 LINC01590Q5TEZ4 76 aa9.48□□□□□ -0.89
SPTLC1P3-201ENST00000403408 ZNF626Q68DY1 528 aa9.48□□□□□ -0.89
SPTLC1P3-201ENST00000403408 C8orf82Q6P1X6 216 aaPredicted RBP9.48□□□□□ -0.89
SPTLC1P3-201ENST00000403408 TCF23Q7RTU1 214 aa9.48□□□□□ -0.89
SPTLC1P3-201ENST00000403408 CYP4Z1Q86W10 505 aa9.48□□□□□ -0.89
SPTLC1P3-201ENST00000403408 DTX3Q8N9I9 347 aa9.48□□□□□ -0.89
SPTLC1P3-201ENST00000403408 SLC37A3Q8NCC5 494 aa9.48□□□□□ -0.89
SPTLC1P3-201ENST00000403408 RTL8AQ9BWD3 113 aa9.48□□□□□ -0.89
SPTLC1P3-201ENST00000403408 NMNAT2Q9BZQ4 307 aa9.48□□□□□ -0.89
SPTLC1P3-201ENST00000403408 BRD7Q9NPI1 651 aa9.48□□□□□ -0.89
SPTLC1P3-201ENST00000403408 TMEM210A6NLX4 147 aa9.47□□□□□ -0.89
SPTLC1P3-201ENST00000403408 H0YHG0 523 aa9.47□□□□□ -0.89
SPTLC1P3-201ENST00000403408 IDH3BO43837 385 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms