RNA–Protein interactions for RNA: ENST00000403162.7

CCDC47-202, Transcript of coiled-coil domain containing 47, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC47, Length 2,195 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-202ENST00000403162 ZNF775Q96BV0 537 aaPredicted RBP17.45■□□□□ 0.38
CCDC47-202ENST00000403162 MICU1Q9BPX6 476 aa17.45■□□□□ 0.38
CCDC47-202ENST00000403162 NTN3O00634 580 aaPredicted RBP17.44■□□□□ 0.38
CCDC47-202ENST00000403162 IGHG1P01857 330 aa17.44■□□□□ 0.38
CCDC47-202ENST00000403162 EIF3IQ13347 325 aaKnown RBP17.44■□□□□ 0.38
CCDC47-202ENST00000403162 ARFRP1Q13795 201 aa17.44■□□□□ 0.38
CCDC47-202ENST00000403162 SLC25A53Q5H9E4 307 aa17.44■□□□□ 0.38
CCDC47-202ENST00000403162 DOK3Q7L591 496 aa17.44■□□□□ 0.38
CCDC47-202ENST00000403162 UEVLDQ8IX04 471 aa17.44■□□□□ 0.38
CCDC47-202ENST00000403162 APCDD1LQ8NCL9 501 aa17.44■□□□□ 0.38
CCDC47-202ENST00000403162 GLYATL2Q8WU03 294 aa17.44■□□□□ 0.38
CCDC47-202ENST00000403162 RNF138Q8WVD3 245 aa17.44■□□□□ 0.38
CCDC47-202ENST00000403162 OR10A2Q9H208 303 aa17.44■□□□□ 0.38
CCDC47-202ENST00000403162 HRH4Q9H3N8 390 aa17.44■□□□□ 0.38
CCDC47-202ENST00000403162 ESRP2Q9H6T0 727 aaKnown RBP17.44■□□□□ 0.38
CCDC47-202ENST00000403162 SEC61A2Q9H9S3 476 aa17.44■□□□□ 0.38
CCDC47-202ENST00000403162 OR2S2Q9NQN1 319 aa17.44■□□□□ 0.38
CCDC47-202ENST00000403162 COA4Q9NYJ1 87 aa17.44■□□□□ 0.38
CCDC47-202ENST00000403162 ZNF319Q9P2F9 582 aa17.44■□□□□ 0.38
CCDC47-202ENST00000403162 IGHV3-20A0A0C4DH32 117 aa17.43■□□□□ 0.38
CCDC47-202ENST00000403162 EFNA2O43921 213 aa17.43■□□□□ 0.38
CCDC47-202ENST00000403162 OR3A2P47893 321 aa17.43■□□□□ 0.38
CCDC47-202ENST00000403162 GABREP78334 506 aa17.43■□□□□ 0.38
CCDC47-202ENST00000403162 MYBPHQ13203 477 aa17.43■□□□□ 0.38
CCDC47-202ENST00000403162 SURF2Q15527 256 aaPredicted RBP17.43■□□□□ 0.38
CCDC47-202ENST00000403162 AVPI1Q5T686 147 aa17.43■□□□□ 0.38
CCDC47-202ENST00000403162 SKA3Q8IX90 412 aa17.43■□□□□ 0.38
CCDC47-202ENST00000403162 MEMO1Q9Y316 297 aa17.43■□□□□ 0.38
CCDC47-202ENST00000403162 FOXI3A8MTJ6 420 aaPredicted RBP17.43■□□□□ 0.38
CCDC47-202ENST00000403162 SHISA8B8ZZ34 492 aa17.43■□□□□ 0.38
CCDC47-202ENST00000403162 SLC2A1P11166 492 aa17.43■□□□□ 0.38
CCDC47-202ENST00000403162 P2RY4P51582 365 aa17.43■□□□□ 0.38
CCDC47-202ENST00000403162 SLC25A47Q6Q0C1 308 aa17.43■□□□□ 0.38
CCDC47-202ENST00000403162 EMG1Q92979 244 aaKnown RBP17.43■□□□□ 0.38
CCDC47-202ENST00000403162 FAM71F1Q96KD3 344 aaPredicted RBP17.43■□□□□ 0.38
CCDC47-202ENST00000403162 MRGPRX4Q96LA9 322 aa17.43■□□□□ 0.38
CCDC47-202ENST00000403162 GPER1Q99527 375 aa17.43■□□□□ 0.38
CCDC47-202ENST00000403162 C12orf57Q99622 126 aa17.43■□□□□ 0.38
CCDC47-202ENST00000403162 PNRC2Q9NPJ4 139 aaKnown RBP17.43■□□□□ 0.38
CCDC47-202ENST00000403162 FAM96BQ9Y3D0 163 aa17.43■□□□□ 0.38
CCDC47-202ENST00000403162 MUC6Q6W4X9 2439 aa17.43■□□□□ 0.38
CCDC47-202ENST00000403162 SPEGQ15772 3267 aa17.42■□□□□ 0.38
CCDC47-202ENST00000403162 DLL1O00548 723 aa17.42■□□□□ 0.38
CCDC47-202ENST00000403162 SNU13P55769 128 aaKnown RBP17.42■□□□□ 0.38
CCDC47-202ENST00000403162 PDZK1IP1Q13113 114 aa17.42■□□□□ 0.38
CCDC47-202ENST00000403162 CYYR1Q96J86 154 aa17.42■□□□□ 0.38
CCDC47-202ENST00000403162 TAF9BQ9HBM6 251 aa17.42■□□□□ 0.38
CCDC47-202ENST00000403162 GHRLQ9UBU3 117 aa17.42■□□□□ 0.38
CCDC47-202ENST00000403162 IGKV1-9A0A0C4DH69 117 aa17.42■□□□□ 0.38
CCDC47-202ENST00000403162 GLRA1P23415 457 aa17.42■□□□□ 0.38
CCDC47-202ENST00000403162 CDAP32320 146 aa17.42■□□□□ 0.38
CCDC47-202ENST00000403162 ALDH3B1P43353 468 aa17.42■□□□□ 0.38
CCDC47-202ENST00000403162 LPAR6P43657 344 aa17.42■□□□□ 0.38
CCDC47-202ENST00000403162 CSNK2A1P68400 391 aaPredicted RBP17.42■□□□□ 0.38
CCDC47-202ENST00000403162 KCNMB1Q16558 191 aa17.42■□□□□ 0.38
CCDC47-202ENST00000403162 SHISA6Q6ZSJ9 500 aa17.42■□□□□ 0.38
CCDC47-202ENST00000403162 TMEM200AQ86VY9 491 aa17.42■□□□□ 0.38
CCDC47-202ENST00000403162 NFAM1Q8NET5 270 aaPredicted RBP17.42■□□□□ 0.38
CCDC47-202ENST00000403162 CSNK2A3Q8NEV1 391 aa17.42■□□□□ 0.38
CCDC47-202ENST00000403162 RXFP4Q8TDU9 374 aa17.42■□□□□ 0.38
CCDC47-202ENST00000403162 ST6GALNAC5Q9BVH7 336 aa17.42■□□□□ 0.38
CCDC47-202ENST00000403162 TGIF2Q9GZN2 237 aa17.42■□□□□ 0.38
CCDC47-202ENST00000403162 SLC22A11Q9NSA0 550 aa17.42■□□□□ 0.38
CCDC47-202ENST00000403162 FGF21Q9NSA1 209 aa17.42■□□□□ 0.38
CCDC47-202ENST00000403162 EHFQ9NZC4 300 aa17.42■□□□□ 0.38
CCDC47-202ENST00000403162 ASH2LQ9UBL3 628 aa17.42■□□□□ 0.38
CCDC47-202ENST00000403162 MEX3AA1L020 520 aaKnown RBP17.41■□□□□ 0.38
CCDC47-202ENST00000403162 PMS2P1A4D2B8 440 aa17.41■□□□□ 0.38
CCDC47-202ENST00000403162 RNASEK-C17orf49H0YIS7 233 aa17.41■□□□□ 0.38
CCDC47-202ENST00000403162 TRAF3IP2O43734 574 aaPredicted RBP17.41■□□□□ 0.38
CCDC47-202ENST00000403162 HTR3BO95264 441 aa17.41■□□□□ 0.38
CCDC47-202ENST00000403162 CRYBA1P05813 215 aa17.41■□□□□ 0.38
CCDC47-202ENST00000403162 CD5P06127 495 aa17.41■□□□□ 0.38
CCDC47-202ENST00000403162 PRF1P14222 555 aa17.41■□□□□ 0.38
CCDC47-202ENST00000403162 ANOS1P23352 680 aa17.41■□□□□ 0.38
CCDC47-202ENST00000403162 MSX1P28360 303 aa17.41■□□□□ 0.38
CCDC47-202ENST00000403162 SULT1A2P50226 295 aa17.41■□□□□ 0.38
CCDC47-202ENST00000403162 ZNF84P51523 738 aa17.41■□□□□ 0.38
CCDC47-202ENST00000403162 ZNF41P51814 821 aaPredicted RBP17.41■□□□□ 0.38
CCDC47-202ENST00000403162 MFAP5Q13361 173 aa17.41■□□□□ 0.38
CCDC47-202ENST00000403162 RPL7L1Q6DKI1 246 aaKnown RBP17.41■□□□□ 0.38
CCDC47-202ENST00000403162 OR51T1Q8NGJ9 327 aa17.41■□□□□ 0.38
CCDC47-202ENST00000403162 MED6O75586 246 aa17.4■□□□□ 0.38
CCDC47-202ENST00000403162 FARS2O95363 451 aaKnown RBP17.4■□□□□ 0.38
CCDC47-202ENST00000403162 SFTA3P0C7M3 94 aa17.4■□□□□ 0.38
CCDC47-202ENST00000403162 HKR1P10072 659 aa17.4■□□□□ 0.38
CCDC47-202ENST00000403162 SPP1P10451 314 aa17.4■□□□□ 0.38
CCDC47-202ENST00000403162 S100A10P60903 97 aa17.4■□□□□ 0.38
CCDC47-202ENST00000403162 B2MP61769 119 aa17.4■□□□□ 0.38
CCDC47-202ENST00000403162 PLPPR5Q32ZL2 321 aa17.4■□□□□ 0.38
CCDC47-202ENST00000403162 BTNL8Q6UX41 500 aa17.4■□□□□ 0.38
CCDC47-202ENST00000403162 PNLDC1Q8NA58 520 aaKnown RBP17.4■□□□□ 0.38
CCDC47-202ENST00000403162 OR14K1Q8NGZ2 314 aa17.4■□□□□ 0.38
CCDC47-202ENST00000403162 THAP3Q8WTV1 239 aaPredicted RBP17.4■□□□□ 0.38
CCDC47-202ENST00000403162 ZNF501Q96CX3 271 aaPredicted RBP17.4■□□□□ 0.38
CCDC47-202ENST00000403162 SDHAF3Q9NRP4 125 aa17.4■□□□□ 0.38
CCDC47-202ENST00000403162 POMT1Q9Y6A1 747 aa17.4■□□□□ 0.38
CCDC47-202ENST00000403162 SDCBPO00560 298 aaPredicted RBP17.4■□□□□ 0.38
CCDC47-202ENST00000403162 RER1O15258 196 aa17.4■□□□□ 0.38
CCDC47-202ENST00000403162 FCGR3AP08637 254 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms