RNA–Protein interactions for RNA: ENST00000402434.6

RTN4-207, Transcript of reticulon 4, humanhuman

TSL 5 BASIC

Gene RTN4, Length 1,456 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-207ENST00000402434 DCDC5Q6ZRR9 648 aa16.06■□□□□ 0.16
RTN4-207ENST00000402434 FBLIM1Q8WUP2 373 aa16.06■□□□□ 0.16
RTN4-207ENST00000402434 TFAP2CQ92754 450 aa16.06■□□□□ 0.16
RTN4-207ENST00000402434 METTL17Q9H7H0 456 aaPredicted RBP16.06■□□□□ 0.16
RTN4-207ENST00000402434 ANK3Q12955 4377 aaKnown RBP16.05■□□□□ 0.16
RTN4-207ENST00000402434 A0A1B0GVI7 797 aa16.05■□□□□ 0.16
RTN4-207ENST00000402434 hCG_1807616A0A1W2PRN6 198 aa16.05■□□□□ 0.16
RTN4-207ENST00000402434 A8MXK9 166 aa16.05■□□□□ 0.16
RTN4-207ENST00000402434 SYT7O43581 403 aa16.05■□□□□ 0.16
RTN4-207ENST00000402434 ISG15P05161 165 aa16.05■□□□□ 0.16
RTN4-207ENST00000402434 UBCP0CG48 685 aaKnown RBP16.05■□□□□ 0.16
RTN4-207ENST00000402434 LIMS3P0CW19 117 aa16.05■□□□□ 0.16
RTN4-207ENST00000402434 LIMS4P0CW20 117 aa16.05■□□□□ 0.16
RTN4-207ENST00000402434 DCKP27707 260 aa16.05■□□□□ 0.16
RTN4-207ENST00000402434 GPM6AP51674 278 aa16.05■□□□□ 0.16
RTN4-207ENST00000402434 GNG3P63215 75 aa16.05■□□□□ 0.16
RTN4-207ENST00000402434 ODF4Q2M2E3 257 aa16.05■□□□□ 0.16
RTN4-207ENST00000402434 CEP78Q5JTW2 689 aa16.05■□□□□ 0.16
RTN4-207ENST00000402434 TEX36Q5VZQ5 186 aa16.05■□□□□ 0.16
RTN4-207ENST00000402434 C8orf59Q8N0T1 100 aaPredicted RBP16.05■□□□□ 0.16
RTN4-207ENST00000402434 SCCPDHQ8NBX0 429 aa16.05■□□□□ 0.16
RTN4-207ENST00000402434 C19orf18Q8NEA5 215 aa16.05■□□□□ 0.16
RTN4-207ENST00000402434 OR51I2Q9H344 312 aa16.05■□□□□ 0.16
RTN4-207ENST00000402434 ISG20L2Q9H9L3 353 aaKnown RBP16.05■□□□□ 0.16
RTN4-207ENST00000402434 TRIM36Q9NQ86 728 aa16.05■□□□□ 0.16
RTN4-207ENST00000402434 LRCH1Q9Y2L9 728 aa16.05■□□□□ 0.16
RTN4-207ENST00000402434 TRAV38-1A0A0B4J264 116 aa16.04■□□□□ 0.16
RTN4-207ENST00000402434 OOEPA6NGQ2 149 aa16.04■□□□□ 0.16
RTN4-207ENST00000402434 OR5B21A6NL26 309 aa16.04■□□□□ 0.16
RTN4-207ENST00000402434 FAM157CP0CG43 387 aa16.04■□□□□ 0.16
RTN4-207ENST00000402434 HNF1AP20823 631 aa16.04■□□□□ 0.16
RTN4-207ENST00000402434 GATA3P23771 443 aa16.04■□□□□ 0.16
RTN4-207ENST00000402434 LCN2P80188 198 aa16.04■□□□□ 0.16
RTN4-207ENST00000402434 KCNJ8Q15842 424 aa16.04■□□□□ 0.16
RTN4-207ENST00000402434 KRTAP21-3Q3LHN1 58 aa16.04■□□□□ 0.16
RTN4-207ENST00000402434 DMRTC1Q5HYR2 192 aa16.04■□□□□ 0.16
RTN4-207ENST00000402434 SFRP4Q6FHJ7 346 aaPredicted RBP16.04■□□□□ 0.16
RTN4-207ENST00000402434 KCTD8Q6ZWB6 473 aa16.04■□□□□ 0.16
RTN4-207ENST00000402434 MOB3CQ70IA8 216 aa16.04■□□□□ 0.16
RTN4-207ENST00000402434 RDH10Q8IZV5 341 aa16.04■□□□□ 0.16
RTN4-207ENST00000402434 BOLLQ8N9W6 283 aaKnown RBP16.04■□□□□ 0.16
RTN4-207ENST00000402434 DEFB108BQ8NET1 73 aa16.04■□□□□ 0.16
RTN4-207ENST00000402434 LRRC29Q8WV35 223 aa16.04■□□□□ 0.16
RTN4-207ENST00000402434 RPL3LQ92901 407 aaKnown RBP16.04■□□□□ 0.16
RTN4-207ENST00000402434 C10orf35Q96D05 121 aa16.04■□□□□ 0.16
RTN4-207ENST00000402434 LOC107986453A0A1B0GWG9 222 aa16.03■□□□□ 0.16
RTN4-207ENST00000402434 IRGMA1A4Y4 181 aa16.03■□□□□ 0.16
RTN4-207ENST00000402434 OR4C45A6NMZ5 311 aa16.03■□□□□ 0.16
RTN4-207ENST00000402434 KIAA1324LA8MWY0 1029 aaPredicted RBP16.03■□□□□ 0.16
RTN4-207ENST00000402434 SRRM5B3KS81 715 aa16.03■□□□□ 0.16
RTN4-207ENST00000402434 ZNF732B4DXR9 585 aa16.03■□□□□ 0.16
RTN4-207ENST00000402434 C3orf80F5H4A9 247 aa16.03■□□□□ 0.16
RTN4-207ENST00000402434 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP16.03■□□□□ 0.16
RTN4-207ENST00000402434 NDUFA2O43678 99 aa16.03■□□□□ 0.16
RTN4-207ENST00000402434 HTR1AP08908 422 aa16.03■□□□□ 0.16
RTN4-207ENST00000402434 RPS2P15880 293 aaKnown RBP16.03■□□□□ 0.16
RTN4-207ENST00000402434 ZNF12P17014 697 aa16.03■□□□□ 0.16
RTN4-207ENST00000402434 EGR1P18146 543 aa16.03■□□□□ 0.16
RTN4-207ENST00000402434 CD80P33681 288 aa16.03■□□□□ 0.16
RTN4-207ENST00000402434 ESCO2Q56NI9 601 aa16.03■□□□□ 0.16
RTN4-207ENST00000402434 TMEM244Q5VVB8 128 aa16.03■□□□□ 0.16
RTN4-207ENST00000402434 PLCXD3Q63HM9 321 aa16.03■□□□□ 0.16
RTN4-207ENST00000402434 LAIR2Q6ISS4 152 aa16.03■□□□□ 0.16
RTN4-207ENST00000402434 LYPD2Q6UXB3 125 aa16.03■□□□□ 0.16
RTN4-207ENST00000402434 NLRC3Q7RTR2 1065 aa16.03■□□□□ 0.16
RTN4-207ENST00000402434 PRIMA1Q86XR5 153 aa16.03■□□□□ 0.16
RTN4-207ENST00000402434 OR10Z1Q8NGY1 313 aa16.03■□□□□ 0.16
RTN4-207ENST00000402434 NEIL1Q96FI4 390 aaPredicted RBP16.03■□□□□ 0.16
RTN4-207ENST00000402434 MXRA5Q9NR99 2828 aa16.03■□□□□ 0.16
RTN4-207ENST00000402434 A0A0G2JMP0 313 aa16.03■□□□□ 0.16
RTN4-207ENST00000402434 A0A0X1KG70 313 aa16.03■□□□□ 0.16
RTN4-207ENST00000402434 A6NIN4 97 aa16.03■□□□□ 0.16
RTN4-207ENST00000402434 MUC1P15941 1255 aaPredicted RBP16.03■□□□□ 0.16
RTN4-207ENST00000402434 MRPL28Q13084 256 aaKnown RBP16.03■□□□□ 0.16
RTN4-207ENST00000402434 ALKBH1Q13686 389 aaKnown RBP16.03■□□□□ 0.16
RTN4-207ENST00000402434 FAHD2BQ6P2I3 314 aaPredicted RBP16.03■□□□□ 0.16
RTN4-207ENST00000402434 ZNF841Q6ZN19 808 aa16.03■□□□□ 0.16
RTN4-207ENST00000402434 FAM90A1Q86YD7 464 aa16.03■□□□□ 0.16
RTN4-207ENST00000402434 OR4M2Q8NGB6 313 aa16.03■□□□□ 0.16
RTN4-207ENST00000402434 HAVCR2Q8TDQ0 301 aa16.03■□□□□ 0.16
RTN4-207ENST00000402434 FAHD2AQ96GK7 314 aa16.03■□□□□ 0.16
RTN4-207ENST00000402434 SSBP3Q9BWW4 388 aaPredicted RBP16.03■□□□□ 0.16
RTN4-207ENST00000402434 DIMT1Q9UNQ2 313 aaKnown RBP16.03■□□□□ 0.16
RTN4-207ENST00000402434 ANKRD61A6NGH8 418 aa16.02■□□□□ 0.15
RTN4-207ENST00000402434 H0YHG0 523 aa16.02■□□□□ 0.15
RTN4-207ENST00000402434 TRAPPC2LH3BP13 241 aa16.02■□□□□ 0.15
RTN4-207ENST00000402434 J3QLI3 93 aa16.02■□□□□ 0.15
RTN4-207ENST00000402434 PHF1O43189 567 aaPredicted RBP16.02■□□□□ 0.15
RTN4-207ENST00000402434 IL17RELQ6ZVW7 336 aa16.02■□□□□ 0.15
RTN4-207ENST00000402434 OR8B3Q8NGG8 313 aa16.02■□□□□ 0.15
RTN4-207ENST00000402434 OR8B2Q96RD0 313 aa16.02■□□□□ 0.15
RTN4-207ENST00000402434 CHST5Q9GZS9 411 aa16.02■□□□□ 0.15
RTN4-207ENST00000402434 PLEKHA1Q9HB21 404 aa16.02■□□□□ 0.15
RTN4-207ENST00000402434 MMP26Q9NRE1 261 aa16.02■□□□□ 0.15
RTN4-207ENST00000402434 PLCXD1Q9NUJ7 323 aa16.02■□□□□ 0.15
RTN4-207ENST00000402434 PQLC2LA1A4F0 135 aa16.01■□□□□ 0.15
RTN4-207ENST00000402434 E9PI62 339 aa16.01■□□□□ 0.15
RTN4-207ENST00000402434 H3BSH0 61 aa16.01■□□□□ 0.15
RTN4-207ENST00000402434 SRD5A1P18405 259 aa16.01■□□□□ 0.15
RTN4-207ENST00000402434 PITPNBP48739 271 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms