RNA–Protein interactions for RNA: ENST00000399655.5

CACNA1C-220, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 13,433 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-220ENST00000399655 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.81□□□□□ -1.16
CACNA1C-220ENST00000399655 A0A1B0GV90 55 aa7.81□□□□□ -1.16
CACNA1C-220ENST00000399655 C17orf105B2RV13 164 aa7.81□□□□□ -1.16
CACNA1C-220ENST00000399655 FCGR3BO75015 233 aa7.81□□□□□ -1.16
CACNA1C-220ENST00000399655 HOXD9P28356 352 aaPredicted RBP7.81□□□□□ -1.16
CACNA1C-220ENST00000399655 PNLIPRP3Q17RR3 467 aa7.81□□□□□ -1.16
CACNA1C-220ENST00000399655 PLA2G12AQ9BZM1 189 aa7.81□□□□□ -1.16
CACNA1C-220ENST00000399655 MIOXQ9UGB7 285 aa7.81□□□□□ -1.16
CACNA1C-220ENST00000399655 PRR36Q9H6K5 1346 aa7.81□□□□□ -1.16
CACNA1C-220ENST00000399655 ZNF593O00488 134 aaPredicted RBP7.81□□□□□ -1.16
CACNA1C-220ENST00000399655 PRKNO60260 465 aaPredicted RBP7.81□□□□□ -1.16
CACNA1C-220ENST00000399655 MGAT2Q10469 447 aa7.81□□□□□ -1.16
CACNA1C-220ENST00000399655 MEX3DQ86XN8 651 aaKnown RBP7.81□□□□□ -1.16
CACNA1C-220ENST00000399655 MTMR14Q8NCE2 650 aa7.81□□□□□ -1.16
CACNA1C-220ENST00000399655 KLK6Q92876 244 aa7.81□□□□□ -1.16
CACNA1C-220ENST00000399655 CLEC5AQ9NY25 188 aa7.81□□□□□ -1.16
CACNA1C-220ENST00000399655 TNRC6AQ8NDV7 1962 aaKnown RBP7.81□□□□□ -1.16
CACNA1C-220ENST00000399655 TRAV38-1A0A0B4J264 116 aa7.8□□□□□ -1.16
CACNA1C-220ENST00000399655 LRRC10BA6NIK2 292 aa7.8□□□□□ -1.16
CACNA1C-220ENST00000399655 CSO75390 466 aaKnown RBP7.8□□□□□ -1.16
CACNA1C-220ENST00000399655 VASPP50552 380 aaPredicted RBP7.8□□□□□ -1.16
CACNA1C-220ENST00000399655 PYCR3Q53H96 274 aa7.8□□□□□ -1.16
CACNA1C-220ENST00000399655 DEGS2Q6QHC5 323 aa7.8□□□□□ -1.16
CACNA1C-220ENST00000399655 GLDNQ6ZMI3 551 aaPredicted RBP7.8□□□□□ -1.16
CACNA1C-220ENST00000399655 C6orf106Q9H6K1 298 aaPredicted RBP7.8□□□□□ -1.16
CACNA1C-220ENST00000399655 ARRDC5A6NEK1 342 aa7.8□□□□□ -1.16
CACNA1C-220ENST00000399655 LEFTY1O75610 366 aa7.8□□□□□ -1.16
CACNA1C-220ENST00000399655 HBZP02008 142 aa7.8□□□□□ -1.16
CACNA1C-220ENST00000399655 SNRPEP62304 92 aaKnown RBP7.8□□□□□ -1.16
CACNA1C-220ENST00000399655 SUSD1Q6UWL2 747 aa7.8□□□□□ -1.16
CACNA1C-220ENST00000399655 NIT1Q86X76 327 aa7.8□□□□□ -1.16
CACNA1C-220ENST00000399655 EDAQ92838 391 aa7.8□□□□□ -1.16
CACNA1C-220ENST00000399655 NAT6Q93015 286 aa7.8□□□□□ -1.16
CACNA1C-220ENST00000399655 EMID1Q96A84 441 aaPredicted RBP7.8□□□□□ -1.16
CACNA1C-220ENST00000399655 PARP12Q9H0J9 701 aaKnown RBP7.8□□□□□ -1.16
CACNA1C-220ENST00000399655 AUP1Q9Y679 476 aa7.8□□□□□ -1.16
CACNA1C-220ENST00000399655 ANKRD36A6QL64 1941 aa7.8□□□□□ -1.16
CACNA1C-220ENST00000399655 TRDV1A0A1B0GX56 115 aa7.8□□□□□ -1.16
CACNA1C-220ENST00000399655 GGTLC3B5MD39 225 aa7.8□□□□□ -1.16
CACNA1C-220ENST00000399655 MALP21145 153 aa7.8□□□□□ -1.16
CACNA1C-220ENST00000399655 ZNF418Q8TF45 676 aaPredicted RBP7.8□□□□□ -1.16
CACNA1C-220ENST00000399655 CHD1O14646 1710 aa7.8□□□□□ -1.16
CACNA1C-220ENST00000399655 A0A1B0GWB2 263 aa7.8□□□□□ -1.16
CACNA1C-220ENST00000399655 FZD9O00144 591 aa7.8□□□□□ -1.16
CACNA1C-220ENST00000399655 FBXL6Q8N531 539 aa7.8□□□□□ -1.16
CACNA1C-220ENST00000399655 TMED3Q9Y3Q3 217 aa7.8□□□□□ -1.16
CACNA1C-220ENST00000399655 USP31Q70CQ4 1352 aa7.8□□□□□ -1.16
CACNA1C-220ENST00000399655 KLHDC8AQ8IYD2 350 aa7.8□□□□□ -1.16
CACNA1C-220ENST00000399655 OR13H1Q8NG92 308 aa7.8□□□□□ -1.16
CACNA1C-220ENST00000399655 VSTM2AQ8TAG5 236 aa7.8□□□□□ -1.16
CACNA1C-220ENST00000399655 ADAMTS13Q76LX8 1427 aa7.8□□□□□ -1.16
CACNA1C-220ENST00000399655 ATP7AQ04656 1500 aa7.8□□□□□ -1.16
CACNA1C-220ENST00000399655 HLA-DRB1P01911 266 aa7.8□□□□□ -1.16
CACNA1C-220ENST00000399655 CRPP02741 224 aa7.8□□□□□ -1.16
CACNA1C-220ENST00000399655 CLDN17P56750 224 aa7.8□□□□□ -1.16
CACNA1C-220ENST00000399655 FAM109BQ6ICB4 259 aaPredicted RBP7.8□□□□□ -1.16
CACNA1C-220ENST00000399655 PIM3Q86V86 326 aa7.8□□□□□ -1.16
CACNA1C-220ENST00000399655 POC1AQ8NBT0 407 aa7.8□□□□□ -1.16
CACNA1C-220ENST00000399655 OR2V1Q8NHB1 315 aa7.8□□□□□ -1.16
CACNA1C-220ENST00000399655 MISP3Q96FF7 219 aa7.8□□□□□ -1.16
CACNA1C-220ENST00000399655 DERL1Q9BUN8 251 aa7.8□□□□□ -1.16
CACNA1C-220ENST00000399655 THADAQ6YHU6 1953 aa7.8□□□□□ -1.16
CACNA1C-220ENST00000399655 CSN3P07498 182 aa7.8□□□□□ -1.16
CACNA1C-220ENST00000399655 RPL17P18621 184 aaKnown RBP7.8□□□□□ -1.16
CACNA1C-220ENST00000399655 AAED1Q7RTV5 226 aa7.8□□□□□ -1.16
CACNA1C-220ENST00000399655 CFAP20Q9Y6A4 193 aaKnown RBP7.8□□□□□ -1.16
CACNA1C-220ENST00000399655 TMEM272A0A1B0GTI8 110 aa7.8□□□□□ -1.16
CACNA1C-220ENST00000399655 TNFRSF1AP19438 455 aa7.8□□□□□ -1.16
CACNA1C-220ENST00000399655 CST4P01036 141 aa7.8□□□□□ -1.16
CACNA1C-220ENST00000399655 CCDC190Q86UF4 302 aa7.8□□□□□ -1.16
CACNA1C-220ENST00000399655 OR1L6Q8NGR2 347 aa7.8□□□□□ -1.16
CACNA1C-220ENST00000399655 GALNT14Q96FL9 552 aa7.8□□□□□ -1.16
CACNA1C-220ENST00000399655 GALPQ9UBC7 116 aa7.8□□□□□ -1.16
CACNA1C-220ENST00000399655 LMO7Q8WWI1 1683 aa7.8□□□□□ -1.16
CACNA1C-220ENST00000399655 PPM1DO15297 605 aa7.8□□□□□ -1.16
CACNA1C-220ENST00000399655 LRP3O75074 770 aa7.8□□□□□ -1.16
CACNA1C-220ENST00000399655 GABRB1P18505 474 aa7.8□□□□□ -1.16
CACNA1C-220ENST00000399655 HOXC13P31276 330 aa7.8□□□□□ -1.16
CACNA1C-220ENST00000399655 CD96P40200 585 aa7.8□□□□□ -1.16
CACNA1C-220ENST00000399655 VWA2Q5GFL6 755 aa7.8□□□□□ -1.16
CACNA1C-220ENST00000399655 CA13Q8N1Q1 262 aa7.8□□□□□ -1.16
CACNA1C-220ENST00000399655 OR52B4Q8NGK2 314 aa7.8□□□□□ -1.16
CACNA1C-220ENST00000399655 HEPACAM2A8MVW5 462 aa7.8□□□□□ -1.16
CACNA1C-220ENST00000399655 DPM2O94777 84 aa7.8□□□□□ -1.16
CACNA1C-220ENST00000399655 MAS1LP35410 378 aa7.8□□□□□ -1.16
CACNA1C-220ENST00000399655 CTSCP53634 463 aa7.8□□□□□ -1.16
CACNA1C-220ENST00000399655 AANATQ16613 207 aa7.8□□□□□ -1.16
CACNA1C-220ENST00000399655 SLC5A12Q1EHB4 618 aa7.8□□□□□ -1.16
CACNA1C-220ENST00000399655 SIGMAR1Q99720 223 aa7.8□□□□□ -1.16
CACNA1C-220ENST00000399655 ASIPP42127 132 aa7.79□□□□□ -1.16
CACNA1C-220ENST00000399655 RPS20P60866 119 aaKnown RBP7.79□□□□□ -1.16
CACNA1C-220ENST00000399655 FAM78BQ5VT40 261 aa7.79□□□□□ -1.16
CACNA1C-220ENST00000399655 ZDHHC22Q8N966 263 aa7.79□□□□□ -1.16
CACNA1C-220ENST00000399655 WDFY2Q96P53 400 aa7.79□□□□□ -1.16
CACNA1C-220ENST00000399655 TET1Q8NFU7 2136 aa7.79□□□□□ -1.16
CACNA1C-220ENST00000399655 DOK2O60496 412 aa7.79□□□□□ -1.16
CACNA1C-220ENST00000399655 PIGFQ07326 219 aa7.79□□□□□ -1.16
CACNA1C-220ENST00000399655 TCF24Q7RTU0 167 aa7.79□□□□□ -1.16
CACNA1C-220ENST00000399655 GBGT1Q8N5D6 347 aa7.79□□□□□ -1.16
CACNA1C-220ENST00000399655 PEX11GQ96HA9 241 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms