RNA–Protein interactions for RNA: ENST00000399438.7

TRAPPC13-202, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TRAPPC13, Length 3,221 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-202ENST00000399438 RPS21P63220 83 aaKnown RBP5.42□□□□□ -1.54
TRAPPC13-202ENST00000399438 SLC48A1Q6P1K1 146 aa5.42□□□□□ -1.54
TRAPPC13-202ENST00000399438 BTNL3Q6UXE8 466 aa5.42□□□□□ -1.54
TRAPPC13-202ENST00000399438 Q6ZSR6 202 aa5.42□□□□□ -1.54
TRAPPC13-202ENST00000399438 MARCH9Q86YJ5 346 aa5.42□□□□□ -1.54
TRAPPC13-202ENST00000399438 PRR22Q8IZ63 422 aa5.42□□□□□ -1.54
TRAPPC13-202ENST00000399438 FAM109AQ8N4B1 249 aa5.42□□□□□ -1.54
TRAPPC13-202ENST00000399438 KCTD12Q96CX2 325 aaKnown RBP5.42□□□□□ -1.54
TRAPPC13-202ENST00000399438 BMFQ96LC9 184 aa5.42□□□□□ -1.54
TRAPPC13-202ENST00000399438 OR2V2Q96R30 315 aa5.42□□□□□ -1.54
TRAPPC13-202ENST00000399438 MAP3K3Q99759 626 aa5.42□□□□□ -1.54
TRAPPC13-202ENST00000399438 HRASLS2Q9NWW9 162 aa5.42□□□□□ -1.54
TRAPPC13-202ENST00000399438 HSPE1-MOB4S4R3N1 261 aa5.42□□□□□ -1.54
TRAPPC13-202ENST00000399438 V9GYY9 64 aa5.42□□□□□ -1.54
TRAPPC13-202ENST00000399438 MPDZO75970 2070 aa5.42□□□□□ -1.54
TRAPPC13-202ENST00000399438 hCG_38984A0A1B0GV85 526 aa5.42□□□□□ -1.54
TRAPPC13-202ENST00000399438 A0A1B0GVT2 93 aa5.42□□□□□ -1.54
TRAPPC13-202ENST00000399438 J3QR06 171 aa5.42□□□□□ -1.54
TRAPPC13-202ENST00000399438 SCO2O43819 266 aa5.42□□□□□ -1.54
TRAPPC13-202ENST00000399438 ACP2P11117 423 aa5.42□□□□□ -1.54
TRAPPC13-202ENST00000399438 CMPK1P30085 196 aa5.42□□□□□ -1.54
TRAPPC13-202ENST00000399438 SSTR2P30874 369 aa5.42□□□□□ -1.54
TRAPPC13-202ENST00000399438 RPL3P39023 403 aaKnown RBP5.42□□□□□ -1.54
TRAPPC13-202ENST00000399438 SNRPD2P62316 118 aaKnown RBP5.42□□□□□ -1.54
TRAPPC13-202ENST00000399438 BTG2P78543 158 aa5.42□□□□□ -1.54
TRAPPC13-202ENST00000399438 UBE2V1Q13404 147 aa5.42□□□□□ -1.54
TRAPPC13-202ENST00000399438 ZNF79Q15937 498 aa5.42□□□□□ -1.54
TRAPPC13-202ENST00000399438 MRPL2Q5T653 305 aaKnown RBP5.42□□□□□ -1.54
TRAPPC13-202ENST00000399438 FRRS1Q6ZNA5 592 aa5.42□□□□□ -1.54
TRAPPC13-202ENST00000399438 LINC00336Q6ZUF6 198 aa5.42□□□□□ -1.54
TRAPPC13-202ENST00000399438 ZNF367Q7RTV3 350 aa5.42□□□□□ -1.54
TRAPPC13-202ENST00000399438 SLC16A14Q7RTX9 510 aa5.42□□□□□ -1.54
TRAPPC13-202ENST00000399438 STPG2Q8N412 459 aa5.42□□□□□ -1.54
TRAPPC13-202ENST00000399438 RAB42Q8N4Z0 105 aa5.42□□□□□ -1.54
TRAPPC13-202ENST00000399438 ZNF557Q8N988 423 aaPredicted RBP5.42□□□□□ -1.54
TRAPPC13-202ENST00000399438 PCNPQ8WW12 178 aaKnown RBP5.42□□□□□ -1.54
TRAPPC13-202ENST00000399438 S100ZQ8WXG8 99 aa5.42□□□□□ -1.54
TRAPPC13-202ENST00000399438 ELSPBP1Q96BH3 223 aa5.42□□□□□ -1.54
TRAPPC13-202ENST00000399438 ANKRD9Q96BM1 317 aaPredicted RBP5.42□□□□□ -1.54
TRAPPC13-202ENST00000399438 PEX11GQ96HA9 241 aa5.42□□□□□ -1.54
TRAPPC13-202ENST00000399438 ATF6BQ99941 703 aa5.42□□□□□ -1.54
TRAPPC13-202ENST00000399438 CCDC3Q9BQI4 270 aa5.42□□□□□ -1.54
TRAPPC13-202ENST00000399438 PELI2Q9HAT8 420 aa5.42□□□□□ -1.54
TRAPPC13-202ENST00000399438 NUFIP1Q9UHK0 495 aaKnown RBP5.42□□□□□ -1.54
TRAPPC13-202ENST00000399438 KNTC1P50748 2209 aa5.42□□□□□ -1.54
TRAPPC13-202ENST00000399438 COL4A2P08572 1712 aa5.42□□□□□ -1.54
TRAPPC13-202ENST00000399438 TEX51A0A1B0GUA7 166 aa5.42□□□□□ -1.54
TRAPPC13-202ENST00000399438 A0A1B0GV72 72 aa5.42□□□□□ -1.54
TRAPPC13-202ENST00000399438 A0A1W2PRG6 482 aa5.42□□□□□ -1.54
TRAPPC13-202ENST00000399438 RFPL4AA6NLU0 287 aa5.42□□□□□ -1.54
TRAPPC13-202ENST00000399438 IDSB3KWA1 339 aa5.42□□□□□ -1.54
TRAPPC13-202ENST00000399438 RFPL4AL1F8VTS6 287 aa5.42□□□□□ -1.54
TRAPPC13-202ENST00000399438 H7C1C5 153 aa5.42□□□□□ -1.54
TRAPPC13-202ENST00000399438 RAD1O60671 282 aa5.42□□□□□ -1.54
TRAPPC13-202ENST00000399438 LIMS3P0CW19 117 aa5.42□□□□□ -1.54
TRAPPC13-202ENST00000399438 LIMS4P0CW20 117 aa5.42□□□□□ -1.54
TRAPPC13-202ENST00000399438 MAOAP21397 527 aa5.42□□□□□ -1.54
TRAPPC13-202ENST00000399438 GPX4P36969 197 aaPredicted RBP5.42□□□□□ -1.54
TRAPPC13-202ENST00000399438 LCN6P62502 163 aa5.42□□□□□ -1.54
TRAPPC13-202ENST00000399438 ZNF155Q12901 538 aaPredicted RBP5.42□□□□□ -1.54
TRAPPC13-202ENST00000399438 SRSF6Q13247 344 aaKnown RBP5.42□□□□□ -1.54
TRAPPC13-202ENST00000399438 SPIN3Q5JUX0 258 aa5.42□□□□□ -1.54
TRAPPC13-202ENST00000399438 ZNF544Q6NX49 715 aa5.42□□□□□ -1.54
TRAPPC13-202ENST00000399438 SLC27A4Q6P1M0 643 aa5.42□□□□□ -1.54
TRAPPC13-202ENST00000399438 CLDN22Q8N7P3 220 aa5.42□□□□□ -1.54
TRAPPC13-202ENST00000399438 COX18Q8N8Q8 333 aa5.42□□□□□ -1.54
TRAPPC13-202ENST00000399438 LINC01356Q8N9X3 169 aa5.42□□□□□ -1.54
TRAPPC13-202ENST00000399438 ZMYND19Q96E35 227 aaPredicted RBP5.42□□□□□ -1.54
TRAPPC13-202ENST00000399438 RNF2Q99496 336 aa5.42□□□□□ -1.54
TRAPPC13-202ENST00000399438 MIXL1Q9H2W2 232 aa5.42□□□□□ -1.54
TRAPPC13-202ENST00000399438 OR51M1Q9H341 326 aa5.42□□□□□ -1.54
TRAPPC13-202ENST00000399438 Q9H8V8 135 aa5.42□□□□□ -1.54
TRAPPC13-202ENST00000399438 SLC25A19Q9HC21 320 aa5.42□□□□□ -1.54
TRAPPC13-202ENST00000399438 SSR3Q9UNL2 185 aa5.42□□□□□ -1.54
TRAPPC13-202ENST00000399438 LSM2Q9Y333 95 aaKnown RBP5.42□□□□□ -1.54
TRAPPC13-202ENST00000399438 UGT2A1Q9Y4X1 527 aa5.42□□□□□ -1.54
TRAPPC13-202ENST00000399438 HEATR5AQ86XA9 2040 aa5.41□□□□□ -1.54
TRAPPC13-202ENST00000399438 RP1L1Q8IWN7 2480 aaPredicted RBP5.41□□□□□ -1.54
TRAPPC13-202ENST00000399438 TRAV24A0A0B4J272 114 aa5.41□□□□□ -1.54
TRAPPC13-202ENST00000399438 PPP1R3DO95685 299 aa5.41□□□□□ -1.54
TRAPPC13-202ENST00000399438 P04436 131 aa5.41□□□□□ -1.54
TRAPPC13-202ENST00000399438 RFPL3SP0C7P2 107 aa5.41□□□□□ -1.54
TRAPPC13-202ENST00000399438 FAM87AP0C7U9 286 aa5.41□□□□□ -1.54
TRAPPC13-202ENST00000399438 PTHLHP12272 177 aa5.41□□□□□ -1.54
TRAPPC13-202ENST00000399438 ANXA3P12429 323 aa5.41□□□□□ -1.54
TRAPPC13-202ENST00000399438 RBM34P42696 430 aaKnown RBP5.41□□□□□ -1.54
TRAPPC13-202ENST00000399438 EMDP50402 254 aa5.41□□□□□ -1.54
TRAPPC13-202ENST00000399438 HMGA2P52926 109 aa5.41□□□□□ -1.54
TRAPPC13-202ENST00000399438 PRR5P85299 388 aa5.41□□□□□ -1.54
TRAPPC13-202ENST00000399438 HTR4Q13639 388 aa5.41□□□□□ -1.54
TRAPPC13-202ENST00000399438 PRTGQ2VWP7 1150 aa5.41□□□□□ -1.54
TRAPPC13-202ENST00000399438 ACSM3Q53FZ2 586 aa5.41□□□□□ -1.54
TRAPPC13-202ENST00000399438 TMEM17Q86X19 198 aa5.41□□□□□ -1.54
TRAPPC13-202ENST00000399438 HIST2H2ABQ8IUE6 130 aaPredicted RBP5.41□□□□□ -1.54
TRAPPC13-202ENST00000399438 LRRC25Q8N386 305 aaPredicted RBP5.41□□□□□ -1.54
TRAPPC13-202ENST00000399438 LRRC18Q8N456 261 aa5.41□□□□□ -1.54
TRAPPC13-202ENST00000399438 OR4D10Q8NGI6 311 aa5.41□□□□□ -1.54
TRAPPC13-202ENST00000399438 OR4K13Q8NH42 304 aa5.41□□□□□ -1.54
TRAPPC13-202ENST00000399438 HIST1H2ACQ93077 130 aa5.41□□□□□ -1.54
TRAPPC13-202ENST00000399438 YIPF5Q969M3 257 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms