RNA–Protein interactions for RNA: ENST00000398738.2

PTCHD4-202, Transcript of patched domain containing 4, humanhuman

TSL 1 (best)

Gene PTCHD4, Length 3,232 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-202ENST00000398738 BGLAPP02818 100 aa8.73□□□□□ -1.01
PTCHD4-202ENST00000398738 FBP1P09467 338 aa8.73□□□□□ -1.01
PTCHD4-202ENST00000398738 PET100P0DJ07 73 aa8.73□□□□□ -1.01
PTCHD4-202ENST00000398738 GIMD1P0DJR0 217 aa8.73□□□□□ -1.01
PTCHD4-202ENST00000398738 CD37P11049 281 aa8.73□□□□□ -1.01
PTCHD4-202ENST00000398738 CDAP32320 146 aa8.73□□□□□ -1.01
PTCHD4-202ENST00000398738 PPP1CCP36873 323 aaKnown RBP8.73□□□□□ -1.01
PTCHD4-202ENST00000398738 TMEM50BP56557 158 aa8.73□□□□□ -1.01
PTCHD4-202ENST00000398738 PNLIPRP3Q17RR3 467 aa8.73□□□□□ -1.01
PTCHD4-202ENST00000398738 PRTGQ2VWP7 1150 aa8.73□□□□□ -1.01
PTCHD4-202ENST00000398738 CHRFAM7AQ494W8 412 aa8.73□□□□□ -1.01
PTCHD4-202ENST00000398738 RPUSD3Q6P087 351 aaKnown RBP8.73□□□□□ -1.01
PTCHD4-202ENST00000398738 TMEM182Q6ZP80 229 aaPredicted RBP8.73□□□□□ -1.01
PTCHD4-202ENST00000398738 SSX9Q7RTT3 188 aa8.73□□□□□ -1.01
PTCHD4-202ENST00000398738 ZNF440Q8IYI8 595 aa8.73□□□□□ -1.01
PTCHD4-202ENST00000398738 FNDC9Q8TBE3 224 aa8.73□□□□□ -1.01
PTCHD4-202ENST00000398738 SCARF2Q96GP6 870 aaPredicted RBP8.73□□□□□ -1.01
PTCHD4-202ENST00000398738 HDHD3Q9BSH5 251 aaPredicted RBP8.73□□□□□ -1.01
PTCHD4-202ENST00000398738 ZNF700Q9H0M5 742 aa8.73□□□□□ -1.01
PTCHD4-202ENST00000398738 LPAR5Q9H1C0 372 aa8.73□□□□□ -1.01
PTCHD4-202ENST00000398738 RNF122Q9H9V4 155 aa8.73□□□□□ -1.01
PTCHD4-202ENST00000398738 NPIPA1Q9UND3 350 aa8.73□□□□□ -1.01
PTCHD4-202ENST00000398738 NUDT21O43809 227 aaKnown RBP8.73□□□□□ -1.01
PTCHD4-202ENST00000398738 RAMP1O60894 148 aa8.73□□□□□ -1.01
PTCHD4-202ENST00000398738 IFNA17P01571 189 aa8.73□□□□□ -1.01
PTCHD4-202ENST00000398738 TTRP02766 147 aa8.73□□□□□ -1.01
PTCHD4-202ENST00000398738 MDKP21741 143 aaPredicted RBP8.73□□□□□ -1.01
PTCHD4-202ENST00000398738 ANOS1P23352 680 aa8.73□□□□□ -1.01
PTCHD4-202ENST00000398738 BLVRBP30043 206 aaPredicted RBP8.73□□□□□ -1.01
PTCHD4-202ENST00000398738 CHAF1BQ13112 559 aa8.73□□□□□ -1.01
PTCHD4-202ENST00000398738 HAGHQ16775 308 aa8.73□□□□□ -1.01
PTCHD4-202ENST00000398738 C1orf100Q5SVJ3 147 aa8.73□□□□□ -1.01
PTCHD4-202ENST00000398738 HLA-DQA1Q5Y7H0 255 aa8.73□□□□□ -1.01
PTCHD4-202ENST00000398738 PLXDC2Q6UX71 529 aa8.73□□□□□ -1.01
PTCHD4-202ENST00000398738 CPEB2Q7Z5Q1 589 aaKnown RBP8.73□□□□□ -1.01
PTCHD4-202ENST00000398738 PEG10Q86TG7 708 aaKnown RBP8.73□□□□□ -1.01
PTCHD4-202ENST00000398738 C17orf78Q8N4C9 275 aa8.73□□□□□ -1.01
PTCHD4-202ENST00000398738 TGM7Q96PF1 710 aa8.73□□□□□ -1.01
PTCHD4-202ENST00000398738 SUCNR1Q9BXA5 334 aa8.73□□□□□ -1.01
PTCHD4-202ENST00000398738 PBOV1Q9GZY1 135 aa8.73□□□□□ -1.01
PTCHD4-202ENST00000398738 S1PR5Q9H228 398 aa8.73□□□□□ -1.01
PTCHD4-202ENST00000398738 MEMO1Q9Y316 297 aa8.73□□□□□ -1.01
PTCHD4-202ENST00000398738 PCNX3Q9H6A9 2034 aa8.72□□□□□ -1.01
PTCHD4-202ENST00000398738 URB1O60287 2271 aaKnown RBP8.72□□□□□ -1.01
PTCHD4-202ENST00000398738 PRR19A6NJB7 356 aa8.72□□□□□ -1.01
PTCHD4-202ENST00000398738 CDRT15L2A8MXV6 281 aa8.72□□□□□ -1.01
PTCHD4-202ENST00000398738 AHSA1O95433 338 aa8.72□□□□□ -1.01
PTCHD4-202ENST00000398738 CD63P08962 238 aa8.72□□□□□ -1.01
PTCHD4-202ENST00000398738 FOLR2P14207 255 aa8.72□□□□□ -1.01
PTCHD4-202ENST00000398738 KLK2P20151 261 aa8.72□□□□□ -1.01
PTCHD4-202ENST00000398738 HSD11B1P28845 292 aa8.72□□□□□ -1.01
PTCHD4-202ENST00000398738 ZNF84P51523 738 aa8.72□□□□□ -1.01
PTCHD4-202ENST00000398738 ROM1Q03395 351 aa8.72□□□□□ -1.01
PTCHD4-202ENST00000398738 SOHLH1Q5JUK2 328 aa8.72□□□□□ -1.01
PTCHD4-202ENST00000398738 PHF19Q5T6S3 580 aa8.72□□□□□ -1.01
PTCHD4-202ENST00000398738 C1orf140Q5VVS0 124 aa8.72□□□□□ -1.01
PTCHD4-202ENST00000398738 FAHD2BQ6P2I3 314 aaPredicted RBP8.72□□□□□ -1.01
PTCHD4-202ENST00000398738 POC1AQ8NBT0 407 aa8.72□□□□□ -1.01
PTCHD4-202ENST00000398738 ADAMTS18Q8TE60 1221 aa8.72□□□□□ -1.01
PTCHD4-202ENST00000398738 NANOS1Q8WY41 292 aaKnown RBP8.72□□□□□ -1.01
PTCHD4-202ENST00000398738 FAHD2AQ96GK7 314 aa8.72□□□□□ -1.01
PTCHD4-202ENST00000398738 MARS2Q96GW9 593 aaKnown RBP8.72□□□□□ -1.01
PTCHD4-202ENST00000398738 TXNIPQ9H3M7 391 aa8.72□□□□□ -1.01
PTCHD4-202ENST00000398738 FAM212BQ9NTI7 297 aaPredicted RBP8.72□□□□□ -1.01
PTCHD4-202ENST00000398738 C14orf166Q9Y224 244 aaKnown RBP8.72□□□□□ -1.01
PTCHD4-202ENST00000398738 PHF3Q92576 2039 aaKnown RBP8.72□□□□□ -1.01
PTCHD4-202ENST00000398738 ADAM10O14672 748 aa8.72□□□□□ -1.01
PTCHD4-202ENST00000398738 NXPH3O95157 252 aa8.72□□□□□ -1.01
PTCHD4-202ENST00000398738 IGHV2-5P01817 119 aa8.72□□□□□ -1.01
PTCHD4-202ENST00000398738 GABRR1P24046 479 aa8.72□□□□□ -1.01
PTCHD4-202ENST00000398738 OPRM1P35372 400 aa8.72□□□□□ -1.01
PTCHD4-202ENST00000398738 RAP1AP62834 184 aa8.72□□□□□ -1.01
PTCHD4-202ENST00000398738 NHLH2Q02577 135 aa8.72□□□□□ -1.01
PTCHD4-202ENST00000398738 HHEXQ03014 270 aa8.72□□□□□ -1.01
PTCHD4-202ENST00000398738 FDX2Q6P4F2 183 aa8.72□□□□□ -1.01
PTCHD4-202ENST00000398738 UNQ6494/PRO21346Q6UXR6 183 aa8.72□□□□□ -1.01
PTCHD4-202ENST00000398738 Q6ZSR6 202 aa8.72□□□□□ -1.01
PTCHD4-202ENST00000398738 WFDC8Q8IUA0 241 aa8.72□□□□□ -1.01
PTCHD4-202ENST00000398738 TMEM151BQ8IW70 566 aa8.72□□□□□ -1.01
PTCHD4-202ENST00000398738 NKAIN3Q8N8D7 197 aa8.72□□□□□ -1.01
PTCHD4-202ENST00000398738 SUMF1Q8NBK3 374 aa8.72□□□□□ -1.01
PTCHD4-202ENST00000398738 OR14K1Q8NGZ2 314 aa8.72□□□□□ -1.01
PTCHD4-202ENST00000398738 MR1Q95460 341 aa8.72□□□□□ -1.01
PTCHD4-202ENST00000398738 SLAMF6Q96DU3 332 aa8.72□□□□□ -1.01
PTCHD4-202ENST00000398738 PRRX2Q99811 253 aa8.72□□□□□ -1.01
PTCHD4-202ENST00000398738 ABHD14AQ9BUJ0 271 aa8.72□□□□□ -1.01
PTCHD4-202ENST00000398738 GPR61Q9BZJ8 451 aa8.72□□□□□ -1.01
PTCHD4-202ENST00000398738 PRODH2Q9UF12 536 aa8.72□□□□□ -1.01
PTCHD4-202ENST00000398738 LINC00271P0C7V0 271 aa8.71□□□□□ -1.01
PTCHD4-202ENST00000398738 HOXB2P14652 356 aa8.71□□□□□ -1.01
PTCHD4-202ENST00000398738 HIST1H1DP16402 221 aaKnown RBP8.71□□□□□ -1.01
PTCHD4-202ENST00000398738 PTGER4P35408 488 aa8.71□□□□□ -1.01
PTCHD4-202ENST00000398738 SNCAP37840 140 aa8.71□□□□□ -1.01
PTCHD4-202ENST00000398738 RAB5CP51148 216 aa8.71□□□□□ -1.01
PTCHD4-202ENST00000398738 USF2Q15853 346 aaPredicted RBP8.71□□□□□ -1.01
PTCHD4-202ENST00000398738 PHLDA2Q53GA4 152 aa8.71□□□□□ -1.01
PTCHD4-202ENST00000398738 C1QL2Q7Z5L3 287 aa8.71□□□□□ -1.01
PTCHD4-202ENST00000398738 BATF2Q8N1L9 274 aa8.71□□□□□ -1.01
PTCHD4-202ENST00000398738 CA5BP1Q8WTZ4 195 aa8.71□□□□□ -1.01
PTCHD4-202ENST00000398738 INTS12Q96CB8 462 aaKnown RBP8.71□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms