RNA–Protein interactions for RNA: ENST00000398729.1

VCX3A-202, Transcript of variable charge X-linked 3A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3A, Length 808 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-202ENST00000398729 MMP9P14780 707 aa11.09□□□□□ -0.63
VCX3A-202ENST00000398729 GPM6AP51674 278 aa11.09□□□□□ -0.63
VCX3A-202ENST00000398729 GMFBP60983 142 aa11.09□□□□□ -0.63
VCX3A-202ENST00000398729 CXCR4P61073 352 aa11.09□□□□□ -0.63
VCX3A-202ENST00000398729 ARF6P62330 175 aa11.09□□□□□ -0.63
VCX3A-202ENST00000398729 GNG3P63215 75 aa11.09□□□□□ -0.63
VCX3A-202ENST00000398729 DEFA6Q01524 100 aa11.09□□□□□ -0.63
VCX3A-202ENST00000398729 RIPPLY1Q0D2K3 151 aa11.09□□□□□ -0.63
VCX3A-202ENST00000398729 PDCD1Q15116 288 aa11.09□□□□□ -0.63
VCX3A-202ENST00000398729 DEFB112Q30KQ8 113 aa11.09□□□□□ -0.63
VCX3A-202ENST00000398729 STUMQ69YW2 141 aa11.09□□□□□ -0.63
VCX3A-202ENST00000398729 ZNF322Q6U7Q0 402 aaPredicted RBP11.09□□□□□ -0.63
VCX3A-202ENST00000398729 KRT74Q7RTS7 529 aa11.09□□□□□ -0.63
VCX3A-202ENST00000398729 GID4Q8IVV7 300 aa11.09□□□□□ -0.63
VCX3A-202ENST00000398729 SLC35F2Q8IXU6 374 aa11.09□□□□□ -0.63
VCX3A-202ENST00000398729 OR5T2Q8NGG2 359 aa11.09□□□□□ -0.63
VCX3A-202ENST00000398729 OR51E1Q8TCB6 317 aa11.09□□□□□ -0.63
VCX3A-202ENST00000398729 LRTOMTQ8WZ04 291 aa11.09□□□□□ -0.63
VCX3A-202ENST00000398729 SEH1LQ96EE3 360 aa11.09□□□□□ -0.63
VCX3A-202ENST00000398729 FAM71F1Q96KD3 344 aaPredicted RBP11.09□□□□□ -0.63
VCX3A-202ENST00000398729 TBX15Q96SF7 602 aa11.09□□□□□ -0.63
VCX3A-202ENST00000398729 SIRPDQ9H106 197 aa11.09□□□□□ -0.63
VCX3A-202ENST00000398729 CNTD2Q9H8S5 307 aa11.09□□□□□ -0.63
VCX3A-202ENST00000398729 GPR84Q9NQS5 396 aa11.09□□□□□ -0.63
VCX3A-202ENST00000398729 NUFIP1Q9UHK0 495 aaKnown RBP11.09□□□□□ -0.63
VCX3A-202ENST00000398729 WNK1Q9H4A3 2382 aa11.08□□□□□ -0.64
VCX3A-202ENST00000398729 MDFIC2A0A1B0GVS7 189 aa11.08□□□□□ -0.64
VCX3A-202ENST00000398729 NKX6-3A6NJ46 265 aa11.08□□□□□ -0.64
VCX3A-202ENST00000398729 ZNF670-ZNF695F2Z2N8 137 aa11.08□□□□□ -0.64
VCX3A-202ENST00000398729 LOC110117498-PIK3R3F6TDL0 507 aa11.08□□□□□ -0.64
VCX3A-202ENST00000398729 AKR7A2O43488 359 aa11.08□□□□□ -0.64
VCX3A-202ENST00000398729 IGLV3-1P01715 115 aa11.08□□□□□ -0.64
VCX3A-202ENST00000398729 ELF3P78545 371 aaPredicted RBP11.08□□□□□ -0.64
VCX3A-202ENST00000398729 MFGE8Q08431 387 aaPredicted RBP11.08□□□□□ -0.64
VCX3A-202ENST00000398729 IKZF1Q13422 519 aa11.08□□□□□ -0.64
VCX3A-202ENST00000398729 CEACAM21Q3KPI0 293 aa11.08□□□□□ -0.64
VCX3A-202ENST00000398729 LRRC10Q5BKY1 277 aa11.08□□□□□ -0.64
VCX3A-202ENST00000398729 CEP78Q5JTW2 689 aa11.08□□□□□ -0.64
VCX3A-202ENST00000398729 ATPAF1Q5TC12 328 aaPredicted RBP11.08□□□□□ -0.64
VCX3A-202ENST00000398729 ZBTB37Q5TC79 503 aa11.08□□□□□ -0.64
VCX3A-202ENST00000398729 RUSC1-AS1Q66K80 236 aa11.08□□□□□ -0.64
VCX3A-202ENST00000398729 FAM216BQ8N7L0 139 aa11.08□□□□□ -0.64
VCX3A-202ENST00000398729 GATAD2BQ8WXI9 593 aa11.08□□□□□ -0.64
VCX3A-202ENST00000398729 CENPNQ96H22 339 aaPredicted RBP11.08□□□□□ -0.64
VCX3A-202ENST00000398729 RAB3IPQ96QF0 476 aaPredicted RBP11.08□□□□□ -0.64
VCX3A-202ENST00000398729 CIB1Q99828 191 aa11.08□□□□□ -0.64
VCX3A-202ENST00000398729 FGF23Q9GZV9 251 aaPredicted RBP11.08□□□□□ -0.64
VCX3A-202ENST00000398729 DNTTIP1Q9H147 329 aa11.08□□□□□ -0.64
VCX3A-202ENST00000398729 WDR13Q9H1Z4 485 aa11.08□□□□□ -0.64
VCX3A-202ENST00000398729 PRDM13Q9H4Q3 707 aa11.08□□□□□ -0.64
VCX3A-202ENST00000398729 MOB1AQ9H8S9 216 aa11.08□□□□□ -0.64
VCX3A-202ENST00000398729 ADGRL4Q9HBW9 690 aa11.08□□□□□ -0.64
VCX3A-202ENST00000398729 SNTG1Q9NSN8 517 aa11.08□□□□□ -0.64
VCX3A-202ENST00000398729 CLN6Q9NWW5 311 aa11.08□□□□□ -0.64
VCX3A-202ENST00000398729 ENPP5Q9UJA9 477 aa11.08□□□□□ -0.64
VCX3A-202ENST00000398729 GTF2A1LQ9UNN4 478 aa11.08□□□□□ -0.64
VCX3A-202ENST00000398729 KPTNQ9Y664 436 aa11.08□□□□□ -0.64
VCX3A-202ENST00000398729 CENPVL3A0A0U1RRI6 287 aa11.07□□□□□ -0.64
VCX3A-202ENST00000398729 A0A1B0GW55 424 aa11.07□□□□□ -0.64
VCX3A-202ENST00000398729 OR5B21A6NL26 309 aa11.07□□□□□ -0.64
VCX3A-202ENST00000398729 ZNF732B4DXR9 585 aa11.07□□□□□ -0.64
VCX3A-202ENST00000398729 HOXA3O43365 443 aaPredicted RBP11.07□□□□□ -0.64
VCX3A-202ENST00000398729 DHRS3O75911 302 aa11.07□□□□□ -0.64
VCX3A-202ENST00000398729 TTRP02766 147 aa11.07□□□□□ -0.64
VCX3A-202ENST00000398729 DUX4L2P0CJ85 424 aa11.07□□□□□ -0.64
VCX3A-202ENST00000398729 DUX4L3P0CJ86 424 aa11.07□□□□□ -0.64
VCX3A-202ENST00000398729 DUX4L4P0CJ87 422 aa11.07□□□□□ -0.64
VCX3A-202ENST00000398729 DUX4L5P0CJ88 424 aa11.07□□□□□ -0.64
VCX3A-202ENST00000398729 DUX4L6P0CJ89 424 aa11.07□□□□□ -0.64
VCX3A-202ENST00000398729 DUX4L7P0CJ90 424 aa11.07□□□□□ -0.64
VCX3A-202ENST00000398729 FAHP16930 419 aa11.07□□□□□ -0.64
VCX3A-202ENST00000398729 AMY2BP19961 511 aa11.07□□□□□ -0.64
VCX3A-202ENST00000398729 GLRA1P23415 457 aa11.07□□□□□ -0.64
VCX3A-202ENST00000398729 TGM4P49221 684 aa11.07□□□□□ -0.64
VCX3A-202ENST00000398729 EGR3Q06889 387 aa11.07□□□□□ -0.64
VCX3A-202ENST00000398729 CDONQ4KMG0 1287 aa11.07□□□□□ -0.64
VCX3A-202ENST00000398729 BCL2L15Q5TBC7 163 aa11.07□□□□□ -0.64
VCX3A-202ENST00000398729 PLCXD3Q63HM9 321 aa11.07□□□□□ -0.64
VCX3A-202ENST00000398729 DUX4L9Q6RFH8 374 aaPredicted RBP11.07□□□□□ -0.64
VCX3A-202ENST00000398729 MOB3CQ70IA8 216 aa11.07□□□□□ -0.64
VCX3A-202ENST00000398729 FGFRL1Q8N441 504 aa11.07□□□□□ -0.64
VCX3A-202ENST00000398729 OR5A2Q8NGI9 324 aa11.07□□□□□ -0.64
VCX3A-202ENST00000398729 ZNF671Q8TAW3 534 aa11.07□□□□□ -0.64
VCX3A-202ENST00000398729 LHX4Q969G2 390 aa11.07□□□□□ -0.64
VCX3A-202ENST00000398729 PPP1R14AQ96A00 147 aa11.07□□□□□ -0.64
VCX3A-202ENST00000398729 MED30Q96HR3 178 aa11.07□□□□□ -0.64
VCX3A-202ENST00000398729 DMRTB1Q96MA1 342 aa11.07□□□□□ -0.64
VCX3A-202ENST00000398729 APOL4Q9BPW4 351 aa11.07□□□□□ -0.64
VCX3A-202ENST00000398729 SEMA6AQ9H2E6 1030 aa11.07□□□□□ -0.64
VCX3A-202ENST00000398729 OR51I2Q9H344 312 aa11.07□□□□□ -0.64
VCX3A-202ENST00000398729 NOX4Q9NPH5 578 aa11.07□□□□□ -0.64
VCX3A-202ENST00000398729 ACOXLQ9NUZ1 547 aa11.07□□□□□ -0.64
VCX3A-202ENST00000398729 NLKQ9UBE8 527 aa11.07□□□□□ -0.64
VCX3A-202ENST00000398729 DUX4Q9UBX2 424 aa11.07□□□□□ -0.64
VCX3A-202ENST00000398729 WARS2Q9UGM6 360 aaKnown RBP11.07□□□□□ -0.64
VCX3A-202ENST00000398729 OAZ3Q9UMX2 235 aa11.07□□□□□ -0.64
VCX3A-202ENST00000398729 PIGLQ9Y2B2 252 aa11.07□□□□□ -0.64
VCX3A-202ENST00000398729 R4GMQ9 66 aa11.07□□□□□ -0.64
VCX3A-202ENST00000398729 IGHV1-69DA0A0B4J2H0 117 aa11.06□□□□□ -0.64
VCX3A-202ENST00000398729 A0A1B0GVI7 797 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms