RNA–Protein interactions for RNA: ENST00000398488.5

MBD1-207, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best) BASIC

Gene MBD1, Length 1,512 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-207ENST00000398488 TMPRSS11AQ6ZMR5 421 aa13.23□□□□□ -0.29
MBD1-207ENST00000398488 LRRC28Q86X40 367 aaPredicted RBP13.23□□□□□ -0.29
MBD1-207ENST00000398488 FTMTQ8N4E7 242 aa13.23□□□□□ -0.29
MBD1-207ENST00000398488 ZNF676Q8N7Q3 588 aa13.23□□□□□ -0.29
MBD1-207ENST00000398488 SCCPDHQ8NBX0 429 aa13.23□□□□□ -0.29
MBD1-207ENST00000398488 OR13C5Q8NGS8 318 aa13.23□□□□□ -0.29
MBD1-207ENST00000398488 FGGYQ96C11 551 aa13.23□□□□□ -0.29
MBD1-207ENST00000398488 RTL8AQ9BWD3 113 aa13.23□□□□□ -0.29
MBD1-207ENST00000398488 OR51I2Q9H344 312 aa13.23□□□□□ -0.29
MBD1-207ENST00000398488 FN3KRPQ9HA64 309 aa13.23□□□□□ -0.29
MBD1-207ENST00000398488 IGKV1-27A0A075B6S5 117 aa13.22□□□□□ -0.29
MBD1-207ENST00000398488 IGKV1-9A0A0C4DH69 117 aa13.22□□□□□ -0.29
MBD1-207ENST00000398488 TRBV2A0A0J9YWF9 115 aa13.22□□□□□ -0.29
MBD1-207ENST00000398488 ISPDA4D126 451 aa13.22□□□□□ -0.29
MBD1-207ENST00000398488 DHRS7CA6NNS2 312 aa13.22□□□□□ -0.29
MBD1-207ENST00000398488 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.22□□□□□ -0.29
MBD1-207ENST00000398488 DENRO43583 198 aaKnown RBP13.22□□□□□ -0.29
MBD1-207ENST00000398488 RHBDL1O75783 438 aa13.22□□□□□ -0.29
MBD1-207ENST00000398488 LHBP01229 141 aa13.22□□□□□ -0.29
MBD1-207ENST00000398488 MT-ND2P03891 347 aa13.22□□□□□ -0.29
MBD1-207ENST00000398488 CCDC159P0C7I6 412 aa13.22□□□□□ -0.29
MBD1-207ENST00000398488 SLC3A1Q07837 685 aa13.22□□□□□ -0.29
MBD1-207ENST00000398488 SFRP4Q6FHJ7 346 aaPredicted RBP13.22□□□□□ -0.29
MBD1-207ENST00000398488 ASPHD2Q6ICH7 369 aa13.22□□□□□ -0.29
MBD1-207ENST00000398488 RPL22L1Q6P5R6 122 aaKnown RBP13.22□□□□□ -0.29
MBD1-207ENST00000398488 KCTD8Q6ZWB6 473 aa13.22□□□□□ -0.29
MBD1-207ENST00000398488 DEFB108BQ8NET1 73 aa13.22□□□□□ -0.29
MBD1-207ENST00000398488 OR5AK2Q8NH90 309 aa13.22□□□□□ -0.29
MBD1-207ENST00000398488 NPRL2Q8WTW4 380 aa13.22□□□□□ -0.29
MBD1-207ENST00000398488 ERGIC1Q969X5 290 aa13.22□□□□□ -0.29
MBD1-207ENST00000398488 TIMD4Q96H15 378 aa13.22□□□□□ -0.29
MBD1-207ENST00000398488 C1orf159Q96HA4 380 aa13.22□□□□□ -0.29
MBD1-207ENST00000398488 OR5M11Q96RB7 305 aa13.22□□□□□ -0.29
MBD1-207ENST00000398488 ZNF665Q9H7R5 613 aa13.22□□□□□ -0.29
MBD1-207ENST00000398488 RNF7Q9UBF6 113 aa13.22□□□□□ -0.29
MBD1-207ENST00000398488 HHLA2Q9UM44 414 aa13.22□□□□□ -0.29
MBD1-207ENST00000398488 LSM2Q9Y333 95 aaKnown RBP13.22□□□□□ -0.29
MBD1-207ENST00000398488 PQLC2LA1A4F0 135 aa13.21□□□□□ -0.29
MBD1-207ENST00000398488 ANKRD61A6NGH8 418 aa13.21□□□□□ -0.29
MBD1-207ENST00000398488 IGHV2-5P01817 119 aa13.21□□□□□ -0.29
MBD1-207ENST00000398488 ZNF16P17020 682 aaPredicted RBP13.21□□□□□ -0.29
MBD1-207ENST00000398488 SEC61A1P61619 476 aaKnown RBP13.21□□□□□ -0.29
MBD1-207ENST00000398488 SNCBQ16143 134 aa13.21□□□□□ -0.29
MBD1-207ENST00000398488 DMKNQ6E0U4 476 aaPredicted RBP13.21□□□□□ -0.29
MBD1-207ENST00000398488 LYPD2Q6UXB3 125 aa13.21□□□□□ -0.29
MBD1-207ENST00000398488 OR5A2Q8NGI9 324 aa13.21□□□□□ -0.29
MBD1-207ENST00000398488 OR11L1Q8NGX0 322 aa13.21□□□□□ -0.29
MBD1-207ENST00000398488 TRMT10AQ8TBZ6 339 aaKnown RBP13.21□□□□□ -0.29
MBD1-207ENST00000398488 LRRC29Q8WV35 223 aa13.21□□□□□ -0.29
MBD1-207ENST00000398488 ITFG2Q969R8 447 aa13.21□□□□□ -0.29
MBD1-207ENST00000398488 TMEM246Q9BRR3 403 aa13.21□□□□□ -0.29
MBD1-207ENST00000398488 CDCA4Q9BXL8 241 aa13.21□□□□□ -0.29
MBD1-207ENST00000398488 CHCHD3Q9NX63 227 aaKnown RBP13.21□□□□□ -0.29
MBD1-207ENST00000398488 SCN3BQ9NY72 215 aa13.21□□□□□ -0.29
MBD1-207ENST00000398488 MALRD1Q5VYJ5 2156 aa13.21□□□□□ -0.29
MBD1-207ENST00000398488 PPIAL4EA0A075B759 164 aa13.2□□□□□ -0.3
MBD1-207ENST00000398488 IGHV3OR15-7A0A075B7D8 119 aa13.2□□□□□ -0.3
MBD1-207ENST00000398488 PNMA8CA0A1B0GUJ8 204 aa13.2□□□□□ -0.3
MBD1-207ENST00000398488 hCG_1807616A0A1W2PRN6 198 aa13.2□□□□□ -0.3
MBD1-207ENST00000398488 PPIAL4DF5H284 164 aa13.2□□□□□ -0.3
MBD1-207ENST00000398488 IFNL4K9M1U5 179 aa13.2□□□□□ -0.3
MBD1-207ENST00000398488 CD5LO43866 347 aa13.2□□□□□ -0.3
MBD1-207ENST00000398488 TFF1P04155 84 aa13.2□□□□□ -0.3
MBD1-207ENST00000398488 HEXAP06865 529 aa13.2□□□□□ -0.3
MBD1-207ENST00000398488 PPIAL4FP0DN26 164 aa13.2□□□□□ -0.3
MBD1-207ENST00000398488 GMFBP60983 142 aa13.2□□□□□ -0.3
MBD1-207ENST00000398488 GNG3P63215 75 aa13.2□□□□□ -0.3
MBD1-207ENST00000398488 MRPL28Q13084 256 aaKnown RBP13.2□□□□□ -0.3
MBD1-207ENST00000398488 CCDC58Q4VC31 144 aa13.2□□□□□ -0.3
MBD1-207ENST00000398488 RNLSQ5VYX0 342 aa13.2□□□□□ -0.3
MBD1-207ENST00000398488 ANGPTL5Q86XS5 388 aa13.2□□□□□ -0.3
MBD1-207ENST00000398488 OR13C3Q8NGS6 347 aa13.2□□□□□ -0.3
MBD1-207ENST00000398488 MYDGFQ969H8 173 aa13.2□□□□□ -0.3
MBD1-207ENST00000398488 ORAI1Q96D31 301 aa13.2□□□□□ -0.3
MBD1-207ENST00000398488 PGLYRP3Q96LB9 341 aa13.2□□□□□ -0.3
MBD1-207ENST00000398488 HIST1H2AAQ96QV6 131 aa13.2□□□□□ -0.3
MBD1-207ENST00000398488 MYCBPQ99417 103 aaPredicted RBP13.2□□□□□ -0.3
MBD1-207ENST00000398488 GAL3ST1Q99999 423 aa13.2□□□□□ -0.3
MBD1-207ENST00000398488 CHST5Q9GZS9 411 aa13.2□□□□□ -0.3
MBD1-207ENST00000398488 WDR13Q9H1Z4 485 aa13.2□□□□□ -0.3
MBD1-207ENST00000398488 LPAR2Q9HBW0 351 aa13.2□□□□□ -0.3
MBD1-207ENST00000398488 TPRKBQ9Y3C4 175 aa13.2□□□□□ -0.3
MBD1-207ENST00000398488 PPIAL4AQ9Y536 164 aa13.2□□□□□ -0.3
MBD1-207ENST00000398488 ARHGAP32A7KAX9 2087 aa13.2□□□□□ -0.3
MBD1-207ENST00000398488 TMEM210A6NLX4 147 aa13.19□□□□□ -0.3
MBD1-207ENST00000398488 LRRC30A6NM36 301 aa13.19□□□□□ -0.3
MBD1-207ENST00000398488 TMEM212A6NML5 194 aa13.19□□□□□ -0.3
MBD1-207ENST00000398488 CEACAM18A8MTB9 384 aa13.19□□□□□ -0.3
MBD1-207ENST00000398488 TNFRSF13BO14836 293 aaPredicted RBP13.19□□□□□ -0.3
MBD1-207ENST00000398488 SYNGR1O43759 233 aa13.19□□□□□ -0.3
MBD1-207ENST00000398488 FCN3O75636 299 aa13.19□□□□□ -0.3
MBD1-207ENST00000398488 MAP2K4P45985 399 aa13.19□□□□□ -0.3
MBD1-207ENST00000398488 SOX2P48431 317 aa13.19□□□□□ -0.3
MBD1-207ENST00000398488 CDH15P55291 814 aa13.19□□□□□ -0.3
MBD1-207ENST00000398488 WNT4P56705 351 aa13.19□□□□□ -0.3
MBD1-207ENST00000398488 RPS11P62280 158 aaKnown RBP eCLIP13.19□□□□□ -0.3
MBD1-207ENST00000398488 MZT1Q08AG7 82 aa13.19□□□□□ -0.3
MBD1-207ENST00000398488 ZNF404Q494X3 552 aa13.19□□□□□ -0.3
MBD1-207ENST00000398488 CYB5R2Q6BCY4 276 aa13.19□□□□□ -0.3
MBD1-207ENST00000398488 HAGHLQ6PII5 290 aaPredicted RBP13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms