RNA–Protein interactions for RNA: ENST00000397378.7

NEDD9-203, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 470 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-203ENST00000397378 SEC23BQ15437 767 aa7.56□□□□□ -1.2
NEDD9-203ENST00000397378 TIGD6Q17RP2 521 aa7.56□□□□□ -1.2
NEDD9-203ENST00000397378 KLHL12Q53G59 568 aa7.56□□□□□ -1.2
NEDD9-203ENST00000397378 AGBL2Q5U5Z8 902 aa7.56□□□□□ -1.2
NEDD9-203ENST00000397378 DCXRQ7Z4W1 244 aa7.56□□□□□ -1.2
NEDD9-203ENST00000397378 CPLX4Q7Z7G2 160 aa7.56□□□□□ -1.2
NEDD9-203ENST00000397378 FAM185AQ8N0U4 392 aa7.56□□□□□ -1.2
NEDD9-203ENST00000397378 FTMTQ8N4E7 242 aa7.56□□□□□ -1.2
NEDD9-203ENST00000397378 C11orf42Q8N5U0 333 aa7.56□□□□□ -1.2
NEDD9-203ENST00000397378 LINC00482Q8N8I6 264 aa7.56□□□□□ -1.2
NEDD9-203ENST00000397378 RPS4Y2Q8TD47 263 aa7.56□□□□□ -1.2
NEDD9-203ENST00000397378 DYDC1Q8WWB3 177 aa7.56□□□□□ -1.2
NEDD9-203ENST00000397378 SGK3Q96BR1 496 aa7.56□□□□□ -1.2
NEDD9-203ENST00000397378 REEP6Q96HR9 211 aa7.56□□□□□ -1.2
NEDD9-203ENST00000397378 DHRS1Q96LJ7 313 aa7.56□□□□□ -1.2
NEDD9-203ENST00000397378 PRR25Q96S07 402 aa7.56□□□□□ -1.2
NEDD9-203ENST00000397378 SIKE1Q9BRV8 207 aa7.56□□□□□ -1.2
NEDD9-203ENST00000397378 FUZQ9BT04 418 aa7.56□□□□□ -1.2
NEDD9-203ENST00000397378 RTL8AQ9BWD3 113 aa7.56□□□□□ -1.2
NEDD9-203ENST00000397378 PAPOLGQ9BWT3 736 aaKnown RBP7.56□□□□□ -1.2
NEDD9-203ENST00000397378 NSRP1Q9H0G5 558 aaKnown RBP7.56□□□□□ -1.2
NEDD9-203ENST00000397378 MUC13Q9H3R2 512 aa7.56□□□□□ -1.2
NEDD9-203ENST00000397378 PPP1R3EQ9H7J1 279 aa7.56□□□□□ -1.2
NEDD9-203ENST00000397378 ELL3Q9HB65 397 aaPredicted RBP7.56□□□□□ -1.2
NEDD9-203ENST00000397378 ABCB9Q9NP78 766 aa7.56□□□□□ -1.2
NEDD9-203ENST00000397378 CHCHD3Q9NX63 227 aaKnown RBP7.56□□□□□ -1.2
NEDD9-203ENST00000397378 NLKQ9UBE8 527 aa7.56□□□□□ -1.2
NEDD9-203ENST00000397378 CD300AQ9UGN4 299 aa7.56□□□□□ -1.2
NEDD9-203ENST00000397378 RHBDD3Q9Y3P4 386 aa7.56□□□□□ -1.2
NEDD9-203ENST00000397378 TSSC4Q9Y5U2 329 aaPredicted RBP7.56□□□□□ -1.2
NEDD9-203ENST00000397378 MPC1Q9Y5U8 109 aa7.56□□□□□ -1.2
NEDD9-203ENST00000397378 COMMD3-BMI1R4GMX3 469 aa7.56□□□□□ -1.2
NEDD9-203ENST00000397378 STARD9Q9P2P6 4700 aa7.55□□□□□ -1.2
NEDD9-203ENST00000397378 IGKV1D-17A0A075B6S4 117 aa7.55□□□□□ -1.2
NEDD9-203ENST00000397378 hCG_1809904A0A1W2PP81 198 aa7.55□□□□□ -1.2
NEDD9-203ENST00000397378 A0A1W2PPE2 198 aa7.55□□□□□ -1.2
NEDD9-203ENST00000397378 A0A1W2PPH5 198 aa7.55□□□□□ -1.2
NEDD9-203ENST00000397378 A0A1W2PR64 198 aa7.55□□□□□ -1.2
NEDD9-203ENST00000397378 A0A1W2PRV1 198 aa7.55□□□□□ -1.2
NEDD9-203ENST00000397378 TBX1O43435 398 aa7.55□□□□□ -1.2
NEDD9-203ENST00000397378 SYNGR1O43759 233 aa7.55□□□□□ -1.2
NEDD9-203ENST00000397378 RAMP3O60896 148 aa7.55□□□□□ -1.2
NEDD9-203ENST00000397378 SERPINA1P01009 418 aa7.55□□□□□ -1.2
NEDD9-203ENST00000397378 PSG2P11465 335 aa7.55□□□□□ -1.2
NEDD9-203ENST00000397378 CHATP28329 748 aa7.55□□□□□ -1.2
NEDD9-203ENST00000397378 DCTDP32321 178 aa7.55□□□□□ -1.2
NEDD9-203ENST00000397378 PYCR1P32322 319 aa7.55□□□□□ -1.2
NEDD9-203ENST00000397378 SLC15A1P46059 708 aa7.55□□□□□ -1.2
NEDD9-203ENST00000397378 GABRA2P47869 451 aa7.55□□□□□ -1.2
NEDD9-203ENST00000397378 GSK3AP49840 483 aa7.55□□□□□ -1.2
NEDD9-203ENST00000397378 DYNLT3P51808 116 aa7.55□□□□□ -1.2
NEDD9-203ENST00000397378 SLC25A1P53007 311 aa7.55□□□□□ -1.2
NEDD9-203ENST00000397378 GRB2P62993 217 aaKnown RBP7.55□□□□□ -1.2
NEDD9-203ENST00000397378 KLF10Q13118 480 aa7.55□□□□□ -1.2
NEDD9-203ENST00000397378 TAF13Q15543 124 aa7.55□□□□□ -1.2
NEDD9-203ENST00000397378 MAPRE2Q15555 327 aa7.55□□□□□ -1.2
NEDD9-203ENST00000397378 TEX30Q5JUR7 227 aa7.55□□□□□ -1.2
NEDD9-203ENST00000397378 KCTD18Q6PI47 426 aaPredicted RBP7.55□□□□□ -1.2
NEDD9-203ENST00000397378 Q6ZS46 218 aa7.55□□□□□ -1.2
NEDD9-203ENST00000397378 PRSS45Q7RTY3 260 aa7.55□□□□□ -1.2
NEDD9-203ENST00000397378 ARPINQ7Z6K5 226 aa7.55□□□□□ -1.2
NEDD9-203ENST00000397378 LHFPL4Q7Z7J7 247 aa7.55□□□□□ -1.2
NEDD9-203ENST00000397378 TMEM219Q86XT9 240 aa7.55□□□□□ -1.2
NEDD9-203ENST00000397378 DYNAPQ8N1N2 210 aa7.55□□□□□ -1.2
NEDD9-203ENST00000397378 ZNRF1Q8ND25 227 aa7.55□□□□□ -1.2
NEDD9-203ENST00000397378 TMEM185AQ8NFB2 350 aa7.55□□□□□ -1.2
NEDD9-203ENST00000397378 OR52H1Q8NGJ2 320 aa7.55□□□□□ -1.2
NEDD9-203ENST00000397378 OR2T4Q8NH00 348 aa7.55□□□□□ -1.2
NEDD9-203ENST00000397378 DDB2Q92466 427 aa7.55□□□□□ -1.2
NEDD9-203ENST00000397378 RPL3LQ92901 407 aaKnown RBP7.55□□□□□ -1.2
NEDD9-203ENST00000397378 FOXRED1Q96CU9 486 aaPredicted RBP7.55□□□□□ -1.2
NEDD9-203ENST00000397378 SLAMF6Q96DU3 332 aa7.55□□□□□ -1.2
NEDD9-203ENST00000397378 MALSU1Q96EH3 234 aa7.55□□□□□ -1.2
NEDD9-203ENST00000397378 SDSLQ96GA7 329 aa7.55□□□□□ -1.2
NEDD9-203ENST00000397378 MCRIP2Q9BUT9 160 aaKnown RBP7.55□□□□□ -1.2
NEDD9-203ENST00000397378 IFT27Q9BW83 186 aa7.55□□□□□ -1.2
NEDD9-203ENST00000397378 SP140LQ9H930 580 aa7.55□□□□□ -1.2
NEDD9-203ENST00000397378 CENPMQ9NSP4 180 aa7.55□□□□□ -1.2
NEDD9-203ENST00000397378 CMTM6Q9NX76 183 aa7.55□□□□□ -1.2
NEDD9-203ENST00000397378 NDUFAF4Q9P032 175 aa7.55□□□□□ -1.2
NEDD9-203ENST00000397378 ZNF222Q9UK12 451 aa7.55□□□□□ -1.2
NEDD9-203ENST00000397378 FAM32AQ9Y421 112 aaKnown RBP7.55□□□□□ -1.2
NEDD9-203ENST00000397378 TBL2Q9Y4P3 447 aaKnown RBP7.55□□□□□ -1.2
NEDD9-203ENST00000397378 N6AMT1Q9Y5N5 214 aa7.55□□□□□ -1.2
NEDD9-203ENST00000397378 HUWE1Q7Z6Z7 4374 aaKnown RBP7.54□□□□□ -1.2
NEDD9-203ENST00000397378 A0A0G2JND7 137 aa7.54□□□□□ -1.2
NEDD9-203ENST00000397378 TVP23AA6NH52 213 aa7.54□□□□□ -1.2
NEDD9-203ENST00000397378 F2RL2O00254 374 aa7.54□□□□□ -1.2
NEDD9-203ENST00000397378 EDF1O60869 148 aaKnown RBP7.54□□□□□ -1.2
NEDD9-203ENST00000397378 RHBDL1O75783 438 aa7.54□□□□□ -1.2
NEDD9-203ENST00000397378 APOC1P02654 83 aa7.54□□□□□ -1.2
NEDD9-203ENST00000397378 ANXA2P07355 339 aaKnown RBP7.54□□□□□ -1.2
NEDD9-203ENST00000397378 GLRA1P23415 457 aa7.54□□□□□ -1.2
NEDD9-203ENST00000397378 CX3CR1P49238 355 aa7.54□□□□□ -1.2
NEDD9-203ENST00000397378 ENTPD1P49961 510 aa7.54□□□□□ -1.2
NEDD9-203ENST00000397378 RAB13P51153 203 aa7.54□□□□□ -1.2
NEDD9-203ENST00000397378 ERVFRD-1P60508 538 aa7.54□□□□□ -1.2
NEDD9-203ENST00000397378 RPL31P62899 125 aaKnown RBP7.54□□□□□ -1.2
NEDD9-203ENST00000397378 BLCAPP62952 87 aa7.54□□□□□ -1.2
NEDD9-203ENST00000397378 KHDRBS1Q07666 443 aaKnown RBP eCLIP7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms