RNA–Protein interactions for RNA: ENST00000397200.8

CAPN3-207, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-207ENST00000397200 GPX8Q8TED1 209 aa12.9□□□□□ -0.34
CAPN3-207ENST00000397200 SSC4DQ8WTU2 575 aa12.9□□□□□ -0.34
CAPN3-207ENST00000397200 MUCL1Q96DR8 90 aa12.9□□□□□ -0.34
CAPN3-207ENST00000397200 OR2H1Q9GZK4 316 aa12.9□□□□□ -0.34
CAPN3-207ENST00000397200 CNTD2Q9H8S5 307 aa12.9□□□□□ -0.34
CAPN3-207ENST00000397200 SCPEP1Q9HB40 452 aa12.9□□□□□ -0.34
CAPN3-207ENST00000397200 GPR84Q9NQS5 396 aa12.9□□□□□ -0.34
CAPN3-207ENST00000397200 B3GNT2Q9NY97 397 aa12.9□□□□□ -0.34
CAPN3-207ENST00000397200 PLEK2Q9NYT0 353 aa12.9□□□□□ -0.34
CAPN3-207ENST00000397200 TRAV18A0A075B6X5 111 aa12.89□□□□□ -0.35
CAPN3-207ENST00000397200 RGS13O14921 159 aa12.89□□□□□ -0.35
CAPN3-207ENST00000397200 SGCEO43556 437 aa12.89□□□□□ -0.35
CAPN3-207ENST00000397200 PRAF2O60831 178 aa12.89□□□□□ -0.35
CAPN3-207ENST00000397200 PEX14O75381 377 aa12.89□□□□□ -0.35
CAPN3-207ENST00000397200 RBBP9O75884 186 aa12.89□□□□□ -0.35
CAPN3-207ENST00000397200 C1QBP02746 253 aa12.89□□□□□ -0.35
CAPN3-207ENST00000397200 CSF1P09603 554 aa12.89□□□□□ -0.35
CAPN3-207ENST00000397200 PPP3CBP16298 524 aa12.89□□□□□ -0.35
CAPN3-207ENST00000397200 PSG4Q00888 419 aa12.89□□□□□ -0.35
CAPN3-207ENST00000397200 TFF3Q07654 80 aa12.89□□□□□ -0.35
CAPN3-207ENST00000397200 PPA1Q15181 289 aa12.89□□□□□ -0.35
CAPN3-207ENST00000397200 RAB35Q15286 201 aa12.89□□□□□ -0.35
CAPN3-207ENST00000397200 RSPO1Q2MKA7 263 aaPredicted RBP12.89□□□□□ -0.35
CAPN3-207ENST00000397200 PABPC1L2AQ5JQF8 200 aa12.89□□□□□ -0.35
CAPN3-207ENST00000397200 C1QTNF12Q5T7M4 302 aa12.89□□□□□ -0.35
CAPN3-207ENST00000397200 MDP1Q86V88 176 aa12.89□□□□□ -0.35
CAPN3-207ENST00000397200 ZNF283Q8N7M2 679 aa12.89□□□□□ -0.35
CAPN3-207ENST00000397200 CCDC54Q8NEL0 328 aa12.89□□□□□ -0.35
CAPN3-207ENST00000397200 OR52N4Q8NGI2 321 aa12.89□□□□□ -0.35
CAPN3-207ENST00000397200 OR14K1Q8NGZ2 314 aa12.89□□□□□ -0.35
CAPN3-207ENST00000397200 AKR7LQ8NHP1 331 aa12.89□□□□□ -0.35
CAPN3-207ENST00000397200 DMRTB1Q96MA1 342 aa12.89□□□□□ -0.35
CAPN3-207ENST00000397200 NKX3-1Q99801 234 aaPredicted RBP12.89□□□□□ -0.35
CAPN3-207ENST00000397200 NUDT16L1Q9BRJ7 211 aaKnown RBP12.89□□□□□ -0.35
CAPN3-207ENST00000397200 WNT5BQ9H1J7 359 aa12.89□□□□□ -0.35
CAPN3-207ENST00000397200 ATG5Q9H1Y0 275 aa12.89□□□□□ -0.35
CAPN3-207ENST00000397200 NOX3Q9HBY0 568 aa12.89□□□□□ -0.35
CAPN3-207ENST00000397200 ING3Q9NXR8 418 aa12.89□□□□□ -0.35
CAPN3-207ENST00000397200 MRPL15Q9P015 296 aaKnown RBP12.89□□□□□ -0.35
CAPN3-207ENST00000397200 HCFC1P51610 2035 aa12.89□□□□□ -0.35
CAPN3-207ENST00000397200 APOC1P02654 83 aa12.88□□□□□ -0.35
CAPN3-207ENST00000397200 SLC2A1P11166 492 aa12.88□□□□□ -0.35
CAPN3-207ENST00000397200 ZNF20P17024 532 aa12.88□□□□□ -0.35
CAPN3-207ENST00000397200 CRYGSP22914 178 aa12.88□□□□□ -0.35
CAPN3-207ENST00000397200 PRSS3P35030 304 aa12.88□□□□□ -0.35
CAPN3-207ENST00000397200 SORDQ00796 357 aa12.88□□□□□ -0.35
CAPN3-207ENST00000397200 IFITM2Q01629 132 aa12.88□□□□□ -0.35
CAPN3-207ENST00000397200 PLP2Q04941 152 aa12.88□□□□□ -0.35
CAPN3-207ENST00000397200 KRTAP27-1Q3LI81 207 aa12.88□□□□□ -0.35
CAPN3-207ENST00000397200 ZNF774Q6NX45 483 aa12.88□□□□□ -0.35
CAPN3-207ENST00000397200 FAM57BQ71RH2 274 aa12.88□□□□□ -0.35
CAPN3-207ENST00000397200 GIMAP1Q8WWP7 306 aa12.88□□□□□ -0.35
CAPN3-207ENST00000397200 SOX7Q9BT81 388 aa12.88□□□□□ -0.35
CAPN3-207ENST00000397200 BEX2Q9BXY8 128 aa12.88□□□□□ -0.35
CAPN3-207ENST00000397200 OR51J1Q9H342 316 aa12.88□□□□□ -0.35
CAPN3-207ENST00000397200 ZNF107Q9UII5 783 aaPredicted RBP12.88□□□□□ -0.35
CAPN3-207ENST00000397200 RAB22AQ9UL26 194 aa12.88□□□□□ -0.35
CAPN3-207ENST00000397200 SLC25A15Q9Y619 301 aa12.88□□□□□ -0.35
CAPN3-207ENST00000397200 V9GYS6 101 aa12.88□□□□□ -0.35
CAPN3-207ENST00000397200 MYO18BQ8IUG5 2567 aa12.88□□□□□ -0.35
CAPN3-207ENST00000397200 NDUFB6O95139 128 aa12.88□□□□□ -0.35
CAPN3-207ENST00000397200 STOMP27105 288 aa12.88□□□□□ -0.35
CAPN3-207ENST00000397200 GRNP28799 593 aaKnown RBP12.88□□□□□ -0.35
CAPN3-207ENST00000397200 FAUP35544 74 aaKnown RBP12.88□□□□□ -0.35
CAPN3-207ENST00000397200 GNALP38405 381 aa12.88□□□□□ -0.35
CAPN3-207ENST00000397200 MAB21L1Q13394 359 aa12.88□□□□□ -0.35
CAPN3-207ENST00000397200 UNC119Q13432 240 aa12.88□□□□□ -0.35
CAPN3-207ENST00000397200 RAB12Q6IQ22 244 aa12.88□□□□□ -0.35
CAPN3-207ENST00000397200 ALKBH2Q6NS38 261 aa12.88□□□□□ -0.35
CAPN3-207ENST00000397200 SEZ6L2Q6UXD5 910 aa12.88□□□□□ -0.35
CAPN3-207ENST00000397200 SSX8Q7RTT4 187 aa12.88□□□□□ -0.35
CAPN3-207ENST00000397200 PAQR4Q8N4S7 273 aaPredicted RBP12.88□□□□□ -0.35
CAPN3-207ENST00000397200 OR13C9Q8NGT0 318 aa12.88□□□□□ -0.35
CAPN3-207ENST00000397200 PHF21AQ96BD5 680 aa12.88□□□□□ -0.35
CAPN3-207ENST00000397200 LYZL4Q96KX0 146 aa12.88□□□□□ -0.35
CAPN3-207ENST00000397200 UBR5O95071 2799 aaPredicted RBP12.87□□□□□ -0.35
CAPN3-207ENST00000397200 WIPF3A6NGB9 483 aa12.87□□□□□ -0.35
CAPN3-207ENST00000397200 TMEM14DPA8MWL7 114 aa12.87□□□□□ -0.35
CAPN3-207ENST00000397200 SYNGR3O43761 229 aa12.87□□□□□ -0.35
CAPN3-207ENST00000397200 ALX3O95076 343 aa12.87□□□□□ -0.35
CAPN3-207ENST00000397200 LPLP06858 475 aa12.87□□□□□ -0.35
CAPN3-207ENST00000397200 CBR1P16152 277 aa12.87□□□□□ -0.35
CAPN3-207ENST00000397200 THBS4P35443 961 aa12.87□□□□□ -0.35
CAPN3-207ENST00000397200 HTR5AP47898 357 aa12.87□□□□□ -0.35
CAPN3-207ENST00000397200 GZMKP49863 264 aa12.87□□□□□ -0.35
CAPN3-207ENST00000397200 ACTBP60709 375 aa12.87□□□□□ -0.35
CAPN3-207ENST00000397200 ACTG1P63261 375 aa12.87□□□□□ -0.35
CAPN3-207ENST00000397200 GUCA2AQ02747 115 aa12.87□□□□□ -0.35
CAPN3-207ENST00000397200 ECH1Q13011 328 aa12.87□□□□□ -0.35
CAPN3-207ENST00000397200 FCN2Q15485 313 aa12.87□□□□□ -0.35
CAPN3-207ENST00000397200 OR2W3Q7Z3T1 314 aa12.87□□□□□ -0.35
CAPN3-207ENST00000397200 OR4C16Q8NGL9 310 aa12.87□□□□□ -0.35
CAPN3-207ENST00000397200 OR1F12Q8NHA8 337 aa12.87□□□□□ -0.35
CAPN3-207ENST00000397200 C10orf35Q96D05 121 aa12.87□□□□□ -0.35
CAPN3-207ENST00000397200 SEH1LQ96EE3 360 aa12.87□□□□□ -0.35
CAPN3-207ENST00000397200 PGAM5Q96HS1 289 aa12.87□□□□□ -0.35
CAPN3-207ENST00000397200 C1orf147Q96MC9 270 aaPredicted RBP12.87□□□□□ -0.35
CAPN3-207ENST00000397200 C1QTNF6Q9BXI9 259 aa12.87□□□□□ -0.35
CAPN3-207ENST00000397200 MED28Q9H204 178 aa12.87□□□□□ -0.35
CAPN3-207ENST00000397200 NDRG3Q9UGV2 375 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms