RNA–Protein interactions for RNA: ENST00000396828.8

NEDD8-202, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-202ENST00000396828 GABARAPO95166 117 aa8.72□□□□□ -1.01
NEDD8-202ENST00000396828 NGFP01138 241 aa8.72□□□□□ -1.01
NEDD8-202ENST00000396828 OTX1P32242 354 aaPredicted RBP8.72□□□□□ -1.01
NEDD8-202ENST00000396828 COMPP49747 757 aaPredicted RBP8.72□□□□□ -1.01
NEDD8-202ENST00000396828 RPS25P62851 125 aaKnown RBP8.72□□□□□ -1.01
NEDD8-202ENST00000396828 ACTG1P63261 375 aa8.72□□□□□ -1.01
NEDD8-202ENST00000396828 PCGF3Q3KNV8 242 aa8.72□□□□□ -1.01
NEDD8-202ENST00000396828 TMEM244Q5VVB8 128 aa8.72□□□□□ -1.01
NEDD8-202ENST00000396828 RFPL4BQ6ZWI9 263 aa8.72□□□□□ -1.01
NEDD8-202ENST00000396828 FAM57BQ71RH2 274 aa8.72□□□□□ -1.01
NEDD8-202ENST00000396828 ELMOD2Q8IZ81 293 aa8.72□□□□□ -1.01
NEDD8-202ENST00000396828 OR52H1Q8NGJ2 320 aa8.72□□□□□ -1.01
NEDD8-202ENST00000396828 ABHD4Q8TB40 342 aa8.72□□□□□ -1.01
NEDD8-202ENST00000396828 SLC25A40Q8TBP6 338 aa8.72□□□□□ -1.01
NEDD8-202ENST00000396828 RPS4Y2Q8TD47 263 aa8.72□□□□□ -1.01
NEDD8-202ENST00000396828 ZNF418Q8TF45 676 aaPredicted RBP8.72□□□□□ -1.01
NEDD8-202ENST00000396828 FAM216AQ8WUB2 273 aa8.72□□□□□ -1.01
NEDD8-202ENST00000396828 ZFAND2BQ8WV99 257 aa8.72□□□□□ -1.01
NEDD8-202ENST00000396828 CCL17Q92583 94 aa8.72□□□□□ -1.01
NEDD8-202ENST00000396828 RNF166Q96A37 237 aaPredicted RBP8.72□□□□□ -1.01
NEDD8-202ENST00000396828 ISOC1Q96CN7 298 aa8.72□□□□□ -1.01
NEDD8-202ENST00000396828 PGAM5Q96HS1 289 aa8.72□□□□□ -1.01
NEDD8-202ENST00000396828 PGLYRP3Q96LB9 341 aa8.72□□□□□ -1.01
NEDD8-202ENST00000396828 PDCD1LG2Q9BQ51 273 aa8.72□□□□□ -1.01
NEDD8-202ENST00000396828 CHCHD6Q9BRQ6 235 aa8.72□□□□□ -1.01
NEDD8-202ENST00000396828 C1QTNF5Q9BXJ0 243 aa8.72□□□□□ -1.01
NEDD8-202ENST00000396828 BCL2L14Q9BZR8 327 aa8.72□□□□□ -1.01
NEDD8-202ENST00000396828 OR2J1Q9GZK6 312 aa8.72□□□□□ -1.01
NEDD8-202ENST00000396828 PBOV1Q9GZY1 135 aa8.72□□□□□ -1.01
NEDD8-202ENST00000396828 RBM38Q9H0Z9 239 aaKnown RBP8.72□□□□□ -1.01
NEDD8-202ENST00000396828 OR10A2Q9H208 303 aa8.72□□□□□ -1.01
NEDD8-202ENST00000396828 POFUT1Q9H488 388 aa8.72□□□□□ -1.01
NEDD8-202ENST00000396828 EXOSC4Q9NPD3 245 aaKnown RBP8.72□□□□□ -1.01
NEDD8-202ENST00000396828 NKIRAS2Q9NYR9 191 aa8.72□□□□□ -1.01
NEDD8-202ENST00000396828 NUFIP1Q9UHK0 495 aaKnown RBP8.72□□□□□ -1.01
NEDD8-202ENST00000396828 SLC22A13Q9Y226 551 aa8.72□□□□□ -1.01
NEDD8-202ENST00000396828 GSTK1Q9Y2Q3 226 aa8.72□□□□□ -1.01
NEDD8-202ENST00000396828 SF3B6Q9Y3B4 125 aaKnown RBP8.72□□□□□ -1.01
NEDD8-202ENST00000396828 N6AMT1Q9Y5N5 214 aa8.72□□□□□ -1.01
NEDD8-202ENST00000396828 TANC2Q9HCD6 1990 aa8.72□□□□□ -1.01
NEDD8-202ENST00000396828 TGP01266 2768 aa8.71□□□□□ -1.01
NEDD8-202ENST00000396828 TRDV1A0A1B0GX56 115 aa8.71□□□□□ -1.02
NEDD8-202ENST00000396828 TPD52L2O43399 206 aaKnown RBP8.71□□□□□ -1.02
NEDD8-202ENST00000396828 TBX1O43435 398 aa8.71□□□□□ -1.02
NEDD8-202ENST00000396828 GATBO75879 557 aaKnown RBP8.71□□□□□ -1.02
NEDD8-202ENST00000396828 FSHBP01225 129 aa8.71□□□□□ -1.02
NEDD8-202ENST00000396828 LCATP04180 440 aa8.71□□□□□ -1.02
NEDD8-202ENST00000396828 ISG15P05161 165 aa8.71□□□□□ -1.02
NEDD8-202ENST00000396828 DBHP09172 617 aa8.71□□□□□ -1.02
NEDD8-202ENST00000396828 ACSM4P0C7M7 580 aa8.71□□□□□ -1.02
NEDD8-202ENST00000396828 ZNF12P17014 697 aa8.71□□□□□ -1.02
NEDD8-202ENST00000396828 ZFP36P26651 326 aaKnown RBP8.71□□□□□ -1.02
NEDD8-202ENST00000396828 MAPK3P27361 379 aaPredicted RBP8.71□□□□□ -1.02
NEDD8-202ENST00000396828 KIR3DL2P43630 455 aa8.71□□□□□ -1.02
NEDD8-202ENST00000396828 ZNF81P51508 661 aa8.71□□□□□ -1.02
NEDD8-202ENST00000396828 SELENOVP59797 346 aa8.71□□□□□ -1.02
NEDD8-202ENST00000396828 LCN2P80188 198 aa8.71□□□□□ -1.02
NEDD8-202ENST00000396828 ODF4Q2M2E3 257 aa8.71□□□□□ -1.02
NEDD8-202ENST00000396828 KRTAP27-1Q3LI81 207 aa8.71□□□□□ -1.02
NEDD8-202ENST00000396828 CD200R1LQ6Q8B3 271 aa8.71□□□□□ -1.02
NEDD8-202ENST00000396828 UNQ6126/PRO20091Q6UXV3 157 aa8.71□□□□□ -1.02
NEDD8-202ENST00000396828 SLC16A12Q6ZSM3 486 aa8.71□□□□□ -1.02
NEDD8-202ENST00000396828 C1QL2Q7Z5L3 287 aa8.71□□□□□ -1.02
NEDD8-202ENST00000396828 COMMD2Q86X83 199 aa8.71□□□□□ -1.02
NEDD8-202ENST00000396828 ZDHHC22Q8N966 263 aa8.71□□□□□ -1.02
NEDD8-202ENST00000396828 KLF14Q8TD94 323 aaPredicted RBP8.71□□□□□ -1.02
NEDD8-202ENST00000396828 GPR148Q8TDV2 347 aa8.71□□□□□ -1.02
NEDD8-202ENST00000396828 TSEN15Q8WW01 171 aaKnown RBP8.71□□□□□ -1.02
NEDD8-202ENST00000396828 SLC7A6Q92536 515 aa8.71□□□□□ -1.02
NEDD8-202ENST00000396828 GCDHQ92947 438 aaPredicted RBP8.71□□□□□ -1.02
NEDD8-202ENST00000396828 ZDHHC16Q969W1 377 aa8.71□□□□□ -1.02
NEDD8-202ENST00000396828 OR51E2Q9H255 320 aa8.71□□□□□ -1.02
NEDD8-202ENST00000396828 SAP30LQ9HAJ7 183 aa8.71□□□□□ -1.02
NEDD8-202ENST00000396828 MSL2Q9HCI7 577 aa8.71□□□□□ -1.02
NEDD8-202ENST00000396828 DECR2Q9NUI1 292 aa8.71□□□□□ -1.02
NEDD8-202ENST00000396828 EIF3KQ9UBQ5 218 aaKnown RBP8.71□□□□□ -1.02
NEDD8-202ENST00000396828 A0A0U1RQV5 110 aa8.7□□□□□ -1.02
NEDD8-202ENST00000396828 A0A1B0GVI7 797 aa8.7□□□□□ -1.02
NEDD8-202ENST00000396828 CLDN25C9JDP6 229 aa8.7□□□□□ -1.02
NEDD8-202ENST00000396828 H3BMQ9 156 aa8.7□□□□□ -1.02
NEDD8-202ENST00000396828 GABRPO00591 440 aa8.7□□□□□ -1.02
NEDD8-202ENST00000396828 SLC22A1O15245 554 aa8.7□□□□□ -1.02
NEDD8-202ENST00000396828 SYT7O43581 403 aa8.7□□□□□ -1.02
NEDD8-202ENST00000396828 SPRY1O43609 319 aaPredicted RBP8.7□□□□□ -1.02
NEDD8-202ENST00000396828 GPX5O75715 221 aa8.7□□□□□ -1.02
NEDD8-202ENST00000396828 ARL6IP5O75915 188 aa8.7□□□□□ -1.02
NEDD8-202ENST00000396828 TTRP02766 147 aa8.7□□□□□ -1.02
NEDD8-202ENST00000396828 OCM2P0CE71 109 aa8.7□□□□□ -1.02
NEDD8-202ENST00000396828 SLC2A1P11166 492 aa8.7□□□□□ -1.02
NEDD8-202ENST00000396828 FGF9P31371 208 aaPredicted RBP8.7□□□□□ -1.02
NEDD8-202ENST00000396828 SEC61A1P61619 476 aaKnown RBP8.7□□□□□ -1.02
NEDD8-202ENST00000396828 LSM3P62310 102 aaKnown RBP8.7□□□□□ -1.02
NEDD8-202ENST00000396828 FABP5Q01469 135 aa8.7□□□□□ -1.02
NEDD8-202ENST00000396828 CTF1Q16619 201 aa8.7□□□□□ -1.02
NEDD8-202ENST00000396828 RSPO1Q2MKA7 263 aaPredicted RBP8.7□□□□□ -1.02
NEDD8-202ENST00000396828 HFEQ30201 348 aa8.7□□□□□ -1.02
NEDD8-202ENST00000396828 GFOD2Q3B7J2 385 aa8.7□□□□□ -1.02
NEDD8-202ENST00000396828 Q499Y3 187 aa8.7□□□□□ -1.02
NEDD8-202ENST00000396828 ACSM3Q53FZ2 586 aa8.7□□□□□ -1.02
NEDD8-202ENST00000396828 DCAF12L2Q5VW00 463 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms