RNA–Protein interactions for RNA: ENST00000396581.5

TRIM40-207, Transcript of tripartite motif containing 40, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM40, Length 2,086 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-207ENST00000396581 JTBO76095 146 aa11.72□□□□□ -0.53
TRIM40-207ENST00000396581 SERPINA5P05154 406 aa11.72□□□□□ -0.53
TRIM40-207ENST00000396581 AMY2BP19961 511 aa11.72□□□□□ -0.53
TRIM40-207ENST00000396581 AGAP20933 346 aa11.72□□□□□ -0.53
TRIM40-207ENST00000396581 NME2P22392 152 aa11.72□□□□□ -0.53
TRIM40-207ENST00000396581 GLRA1P23415 457 aa11.72□□□□□ -0.53
TRIM40-207ENST00000396581 CD80P33681 288 aa11.72□□□□□ -0.53
TRIM40-207ENST00000396581 THBS4P35443 961 aa11.72□□□□□ -0.53
TRIM40-207ENST00000396581 BIDP55957 195 aa11.72□□□□□ -0.53
TRIM40-207ENST00000396581 NSDHLQ15738 373 aa11.72□□□□□ -0.53
TRIM40-207ENST00000396581 CRIP3Q6Q6R5 217 aa11.72□□□□□ -0.53
TRIM40-207ENST00000396581 OR8B12Q8NGG6 310 aa11.72□□□□□ -0.53
TRIM40-207ENST00000396581 HIST1H2BAQ96A08 127 aa11.72□□□□□ -0.53
TRIM40-207ENST00000396581 SPACA5Q96QH8 159 aa11.72□□□□□ -0.53
TRIM40-207ENST00000396581 SCRT1Q9BWW7 348 aa11.72□□□□□ -0.53
TRIM40-207ENST00000396581 BANF2Q9H503 90 aa11.72□□□□□ -0.53
TRIM40-207ENST00000396581 SEBOXQ9HB31 216 aaPredicted RBP11.72□□□□□ -0.53
TRIM40-207ENST00000396581 SERINC1Q9NRX5 453 aa11.72□□□□□ -0.53
TRIM40-207ENST00000396581 DECR2Q9NUI1 292 aa11.72□□□□□ -0.53
TRIM40-207ENST00000396581 ALKBH4Q9NXW9 302 aa11.72□□□□□ -0.53
TRIM40-207ENST00000396581 RPH3AQ9Y2J0 694 aaPredicted RBP11.72□□□□□ -0.53
TRIM40-207ENST00000396581 TNRC6BQ9UPQ9 1833 aaKnown RBP11.72□□□□□ -0.53
TRIM40-207ENST00000396581 DEDDO75618 318 aa11.72□□□□□ -0.53
TRIM40-207ENST00000396581 MYF5P13349 255 aa11.72□□□□□ -0.53
TRIM40-207ENST00000396581 PRF1P14222 555 aa11.72□□□□□ -0.53
TRIM40-207ENST00000396581 ZNF44P15621 663 aa11.72□□□□□ -0.53
TRIM40-207ENST00000396581 ECI1P42126 302 aa11.72□□□□□ -0.53
TRIM40-207ENST00000396581 SNRPEP62304 92 aaKnown RBP11.72□□□□□ -0.53
TRIM40-207ENST00000396581 RBM39Q14498 530 aaKnown RBP11.72□□□□□ -0.53
TRIM40-207ENST00000396581 FAM76BQ5HYJ3 339 aa11.72□□□□□ -0.53
TRIM40-207ENST00000396581 OPN5Q6U736 354 aa11.72□□□□□ -0.53
TRIM40-207ENST00000396581 D2HGDHQ8N465 521 aa11.72□□□□□ -0.53
TRIM40-207ENST00000396581 COMMD1Q8N668 190 aa11.72□□□□□ -0.53
TRIM40-207ENST00000396581 TMEM105Q8N8V8 129 aa11.72□□□□□ -0.53
TRIM40-207ENST00000396581 RNF138Q8WVD3 245 aa11.72□□□□□ -0.53
TRIM40-207ENST00000396581 DDIT4LQ96D03 193 aa11.72□□□□□ -0.53
TRIM40-207ENST00000396581 CYYR1Q96J86 154 aa11.72□□□□□ -0.53
TRIM40-207ENST00000396581 TAAR9Q96RI9 348 aa11.72□□□□□ -0.53
TRIM40-207ENST00000396581 SOX7Q9BT81 388 aa11.72□□□□□ -0.53
TRIM40-207ENST00000396581 CRB3Q9BUF7 120 aa11.72□□□□□ -0.53
TRIM40-207ENST00000396581 OR10A2Q9H208 303 aa11.72□□□□□ -0.53
TRIM40-207ENST00000396581 PNRC2Q9NPJ4 139 aaKnown RBP11.72□□□□□ -0.53
TRIM40-207ENST00000396581 C1orf123Q9NWV4 160 aa11.72□□□□□ -0.53
TRIM40-207ENST00000396581 ZNF319Q9P2F9 582 aa11.72□□□□□ -0.53
TRIM40-207ENST00000396581 DHCR7Q9UBM7 475 aaKnown RBP11.72□□□□□ -0.53
TRIM40-207ENST00000396581 SPEGQ15772 3267 aa11.71□□□□□ -0.53
TRIM40-207ENST00000396581 IGKV1-9A0A0C4DH69 117 aa11.71□□□□□ -0.53
TRIM40-207ENST00000396581 YKT6O15498 198 aa11.71□□□□□ -0.53
TRIM40-207ENST00000396581 IGLV3-1P01715 115 aa11.71□□□□□ -0.53
TRIM40-207ENST00000396581 MT-ND4LP03901 98 aa11.71□□□□□ -0.53
TRIM40-207ENST00000396581 RPL12P30050 165 aaKnown RBP11.71□□□□□ -0.53
TRIM40-207ENST00000396581 C17orf67Q0P5P2 114 aa11.71□□□□□ -0.53
TRIM40-207ENST00000396581 ABHD12BQ7Z5M8 362 aaPredicted RBP11.71□□□□□ -0.53
TRIM40-207ENST00000396581 KMT5CQ86Y97 462 aa11.71□□□□□ -0.53
TRIM40-207ENST00000396581 UBAC2Q8NBM4 344 aa11.71□□□□□ -0.53
TRIM40-207ENST00000396581 ADPRHL1Q8NDY3 354 aa11.71□□□□□ -0.53
TRIM40-207ENST00000396581 CLCC1Q96S66 551 aa11.71□□□□□ -0.53
TRIM40-207ENST00000396581 VN1R1Q9GZP7 353 aa11.71□□□□□ -0.53
TRIM40-207ENST00000396581 ZNF304Q9HCX3 659 aa11.71□□□□□ -0.53
TRIM40-207ENST00000396581 GPR84Q9NQS5 396 aa11.71□□□□□ -0.53
TRIM40-207ENST00000396581 SLC22A11Q9NSA0 550 aa11.71□□□□□ -0.53
TRIM40-207ENST00000396581 AMDHD2Q9Y303 409 aa11.71□□□□□ -0.53
TRIM40-207ENST00000396581 LY6G6EA0A0G2JKS1 128 aa11.71□□□□□ -0.54
TRIM40-207ENST00000396581 C1orf196B1AJZ1 125 aa11.71□□□□□ -0.54
TRIM40-207ENST00000396581 M0R296 226 aa11.71□□□□□ -0.54
TRIM40-207ENST00000396581 RRP8O43159 456 aaKnown RBP11.71□□□□□ -0.54
TRIM40-207ENST00000396581 PGA4P0DJD7 388 aa11.71□□□□□ -0.54
TRIM40-207ENST00000396581 PGA3P0DJD8 388 aa11.71□□□□□ -0.54
TRIM40-207ENST00000396581 NAT2P11245 290 aa11.71□□□□□ -0.54
TRIM40-207ENST00000396581 LMO1P25800 156 aa11.71□□□□□ -0.54
TRIM40-207ENST00000396581 PTGER4P35408 488 aa11.71□□□□□ -0.54
TRIM40-207ENST00000396581 OR3A2P47893 321 aa11.71□□□□□ -0.54
TRIM40-207ENST00000396581 SNU13P55769 128 aaKnown RBP11.71□□□□□ -0.54
TRIM40-207ENST00000396581 ZNF121P58317 390 aaPredicted RBP11.71□□□□□ -0.54
TRIM40-207ENST00000396581 ARFRP1Q13795 201 aa11.71□□□□□ -0.54
TRIM40-207ENST00000396581 PPA1Q15181 289 aa11.71□□□□□ -0.54
TRIM40-207ENST00000396581 KCNMB1Q16558 191 aa11.71□□□□□ -0.54
TRIM40-207ENST00000396581 OR2A2Q6IF42 318 aa11.71□□□□□ -0.54
TRIM40-207ENST00000396581 Q6ZRG5 221 aa11.71□□□□□ -0.54
TRIM40-207ENST00000396581 DOK3Q7L591 496 aa11.71□□□□□ -0.54
TRIM40-207ENST00000396581 ZNF561Q8N587 486 aa11.71□□□□□ -0.54
TRIM40-207ENST00000396581 OR14K1Q8NGZ2 314 aa11.71□□□□□ -0.54
TRIM40-207ENST00000396581 RELTQ969Z4 430 aa11.71□□□□□ -0.54
TRIM40-207ENST00000396581 ZNF251Q9BRH9 671 aa11.71□□□□□ -0.54
TRIM40-207ENST00000396581 EMC6Q9BV81 110 aa11.71□□□□□ -0.54
TRIM40-207ENST00000396581 TM2D1Q9BX74 207 aa11.71□□□□□ -0.54
TRIM40-207ENST00000396581 U3KQA8 63 aa11.71□□□□□ -0.54
TRIM40-207ENST00000396581 SERPINE3A8MV23 424 aa11.7□□□□□ -0.54
TRIM40-207ENST00000396581 K7EPK0 472 aa11.7□□□□□ -0.54
TRIM40-207ENST00000396581 TOX3O15405 576 aaPredicted RBP11.7□□□□□ -0.54
TRIM40-207ENST00000396581 CRTAPO75718 401 aaPredicted RBP11.7□□□□□ -0.54
TRIM40-207ENST00000396581 IFNA2P01563 188 aa11.7□□□□□ -0.54
TRIM40-207ENST00000396581 HOXB5P09067 269 aa11.7□□□□□ -0.54
TRIM40-207ENST00000396581 OR8U9P0C7N5 309 aa11.7□□□□□ -0.54
TRIM40-207ENST00000396581 ATXN8OSP0DMR3 200 aa11.7□□□□□ -0.54
TRIM40-207ENST00000396581 ANOS1P23352 680 aa11.7□□□□□ -0.54
TRIM40-207ENST00000396581 CTSSP25774 331 aa11.7□□□□□ -0.54
TRIM40-207ENST00000396581 S100A10P60903 97 aa11.7□□□□□ -0.54
TRIM40-207ENST00000396581 CSNK2A1P68400 391 aaPredicted RBP11.7□□□□□ -0.54
TRIM40-207ENST00000396581 SLC25A53Q5H9E4 307 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms