RNA–Protein interactions for RNA: ENST00000394456.9

GTF2F1-201, Transcript of general transcription factor IIF subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2F1, Length 2,731 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-201ENST00000394456 ANGPTL7O43827 346 aa11.81□□□□□ -0.52
GTF2F1-201ENST00000394456 KNG1P01042 644 aa11.81□□□□□ -0.52
GTF2F1-201ENST00000394456 CD63P08962 238 aa11.81□□□□□ -0.52
GTF2F1-201ENST00000394456 FCGR2AP12318 317 aa11.81□□□□□ -0.52
GTF2F1-201ENST00000394456 BLVRBP30043 206 aaPredicted RBP11.81□□□□□ -0.52
GTF2F1-201ENST00000394456 NTF4P34130 210 aa11.81□□□□□ -0.52
GTF2F1-201ENST00000394456 SNU13P55769 128 aaKnown RBP11.81□□□□□ -0.52
GTF2F1-201ENST00000394456 PAN3Q58A45 887 aaKnown RBP11.81□□□□□ -0.52
GTF2F1-201ENST00000394456 C20orf196Q8IYI0 205 aa11.81□□□□□ -0.52
GTF2F1-201ENST00000394456 BATF2Q8N1L9 274 aa11.81□□□□□ -0.52
GTF2F1-201ENST00000394456 KCNG3Q8TAE7 436 aa11.81□□□□□ -0.52
GTF2F1-201ENST00000394456 PIK3IP1Q96FE7 263 aa11.81□□□□□ -0.52
GTF2F1-201ENST00000394456 RBM24Q9BX46 236 aaKnown RBP11.81□□□□□ -0.52
GTF2F1-201ENST00000394456 OR2S2Q9NQN1 319 aa11.81□□□□□ -0.52
GTF2F1-201ENST00000394456 GSKIPQ9P0R6 139 aa11.81□□□□□ -0.52
GTF2F1-201ENST00000394456 MCTS1Q9ULC4 181 aaKnown RBP11.81□□□□□ -0.52
GTF2F1-201ENST00000394456 ACP1P24666 158 aa11.8□□□□□ -0.52
GTF2F1-201ENST00000394456 OTX2P32243 289 aa11.8□□□□□ -0.52
GTF2F1-201ENST00000394456 CSNK2A1P68400 391 aaPredicted RBP11.8□□□□□ -0.52
GTF2F1-201ENST00000394456 CSNK2A3Q8NEV1 391 aa11.8□□□□□ -0.52
GTF2F1-201ENST00000394456 OR5H2Q8NGV7 314 aa11.8□□□□□ -0.52
GTF2F1-201ENST00000394456 ARPC5LQ9BPX5 153 aa11.8□□□□□ -0.52
GTF2F1-201ENST00000394456 PROK2Q9HC23 129 aa11.8□□□□□ -0.52
GTF2F1-201ENST00000394456 EHFQ9NZC4 300 aa11.8□□□□□ -0.52
GTF2F1-201ENST00000394456 LOXL2Q9Y4K0 774 aa11.8□□□□□ -0.52
GTF2F1-201ENST00000394456 FLVCR1Q9Y5Y0 555 aa11.8□□□□□ -0.52
GTF2F1-201ENST00000394456 A0A0G2JMM0 328 aa11.8□□□□□ -0.52
GTF2F1-201ENST00000394456 A0A1W2PPB8 328 aa11.8□□□□□ -0.52
GTF2F1-201ENST00000394456 A0A1W2PRS3 328 aa11.8□□□□□ -0.52
GTF2F1-201ENST00000394456 KIR3DP1A8MWS1 328 aa11.8□□□□□ -0.52
GTF2F1-201ENST00000394456 GABRR1P24046 479 aa11.8□□□□□ -0.52
GTF2F1-201ENST00000394456 PTGFRP43088 359 aa11.8□□□□□ -0.52
GTF2F1-201ENST00000394456 HGFACQ04756 655 aa11.8□□□□□ -0.52
GTF2F1-201ENST00000394456 RAB32Q13637 225 aa11.8□□□□□ -0.52
GTF2F1-201ENST00000394456 EXT1Q16394 746 aa11.8□□□□□ -0.52
GTF2F1-201ENST00000394456 NKAPLQ5M9Q1 402 aa11.8□□□□□ -0.52
GTF2F1-201ENST00000394456 RAET1LQ5VY80 246 aa11.8□□□□□ -0.52
GTF2F1-201ENST00000394456 CLEC9AQ6UXN8 241 aa11.8□□□□□ -0.52
GTF2F1-201ENST00000394456 TMEM156Q8N614 296 aa11.8□□□□□ -0.52
GTF2F1-201ENST00000394456 FADS6Q8N9I5 356 aa11.8□□□□□ -0.52
GTF2F1-201ENST00000394456 OR10A2Q9H208 303 aa11.8□□□□□ -0.52
GTF2F1-201ENST00000394456 ZNF701Q9NV72 531 aaPredicted RBP11.8□□□□□ -0.52
GTF2F1-201ENST00000394456 CACNA1HO95180 2353 aa11.8□□□□□ -0.52
GTF2F1-201ENST00000394456 TOR1AO14656 332 aa11.8□□□□□ -0.52
GTF2F1-201ENST00000394456 ABCD4O14678 606 aa11.8□□□□□ -0.52
GTF2F1-201ENST00000394456 CYC1P08574 325 aa11.8□□□□□ -0.52
GTF2F1-201ENST00000394456 GLI4P10075 376 aa11.8□□□□□ -0.52
GTF2F1-201ENST00000394456 RCC1P18754 421 aaPredicted RBP11.8□□□□□ -0.52
GTF2F1-201ENST00000394456 RRADP55042 308 aa11.8□□□□□ -0.52
GTF2F1-201ENST00000394456 PDCD1Q15116 288 aa11.8□□□□□ -0.52
GTF2F1-201ENST00000394456 TMEM128Q5BJH2 165 aa11.8□□□□□ -0.52
GTF2F1-201ENST00000394456 DCAF12Q5T6F0 453 aa11.8□□□□□ -0.52
GTF2F1-201ENST00000394456 NABP1Q96AH0 204 aa11.8□□□□□ -0.52
GTF2F1-201ENST00000394456 FBXO17Q96EF6 278 aa11.8□□□□□ -0.52
GTF2F1-201ENST00000394456 LIME1Q9H400 295 aa11.8□□□□□ -0.52
GTF2F1-201ENST00000394456 GPR173Q9NS66 373 aa11.8□□□□□ -0.52
GTF2F1-201ENST00000394456 FBLN5Q9UBX5 448 aa11.8□□□□□ -0.52
GTF2F1-201ENST00000394456 PISDQ9UG56 409 aa11.8□□□□□ -0.52
GTF2F1-201ENST00000394456 NCKAP5O14513 1909 aa11.79□□□□□ -0.52
GTF2F1-201ENST00000394456 DHRS7CA6NNS2 312 aa11.79□□□□□ -0.52
GTF2F1-201ENST00000394456 BET1O15155 118 aa11.79□□□□□ -0.52
GTF2F1-201ENST00000394456 SPRY1O43609 319 aaPredicted RBP11.79□□□□□ -0.52
GTF2F1-201ENST00000394456 SFT2D2O95562 160 aa11.79□□□□□ -0.52
GTF2F1-201ENST00000394456 CHRM2P08172 466 aa11.79□□□□□ -0.52
GTF2F1-201ENST00000394456 RPS2P15880 293 aaKnown RBP11.79□□□□□ -0.52
GTF2F1-201ENST00000394456 TCN2P20062 427 aa11.79□□□□□ -0.52
GTF2F1-201ENST00000394456 ACKR3P25106 362 aa11.79□□□□□ -0.52
GTF2F1-201ENST00000394456 SSR4P51571 173 aa11.79□□□□□ -0.52
GTF2F1-201ENST00000394456 ZNF169Q14929 603 aaPredicted RBP11.79□□□□□ -0.52
GTF2F1-201ENST00000394456 OPN5Q6U736 354 aa11.79□□□□□ -0.52
GTF2F1-201ENST00000394456 PLXDC2Q6UX71 529 aa11.79□□□□□ -0.52
GTF2F1-201ENST00000394456 DOK3Q7L591 496 aa11.79□□□□□ -0.52
GTF2F1-201ENST00000394456 TIPARPQ7Z3E1 657 aaKnown RBP11.79□□□□□ -0.52
GTF2F1-201ENST00000394456 RPS19BP1Q86WX3 136 aaKnown RBP11.79□□□□□ -0.52
GTF2F1-201ENST00000394456 ASB13Q8WXK3 278 aa11.79□□□□□ -0.52
GTF2F1-201ENST00000394456 PECRQ9BY49 303 aa11.79□□□□□ -0.52
GTF2F1-201ENST00000394456 PIGLQ9Y2B2 252 aa11.79□□□□□ -0.52
GTF2F1-201ENST00000394456 FAM96BQ9Y3D0 163 aa11.79□□□□□ -0.52
GTF2F1-201ENST00000394456 ARPC4-TTLL3A0A0A6YYG9 625 aa11.79□□□□□ -0.52
GTF2F1-201ENST00000394456 FAM221AA4D161 298 aa11.79□□□□□ -0.52
GTF2F1-201ENST00000394456 TNFSF11O14788 317 aa11.79□□□□□ -0.52
GTF2F1-201ENST00000394456 SNAPC5O75971 98 aa11.79□□□□□ -0.52
GTF2F1-201ENST00000394456 F10P00742 488 aa11.79□□□□□ -0.52
GTF2F1-201ENST00000394456 GSTP1P09211 210 aaKnown RBP11.79□□□□□ -0.52
GTF2F1-201ENST00000394456 NAT1P18440 290 aa11.79□□□□□ -0.52
GTF2F1-201ENST00000394456 CCL1P22362 96 aa11.79□□□□□ -0.52
GTF2F1-201ENST00000394456 PTGER4P35408 488 aa11.79□□□□□ -0.52
GTF2F1-201ENST00000394456 ID4P47928 161 aa11.79□□□□□ -0.52
GTF2F1-201ENST00000394456 CSNK1A1P48729 337 aa11.79□□□□□ -0.52
GTF2F1-201ENST00000394456 S100A10P60903 97 aa11.79□□□□□ -0.52
GTF2F1-201ENST00000394456 SRXN1Q9BYN0 137 aa11.79□□□□□ -0.52
GTF2F1-201ENST00000394456 ANAPC10Q9UM13 185 aa11.79□□□□□ -0.52
GTF2F1-201ENST00000394456 OSGIN2Q9Y236 505 aa11.79□□□□□ -0.52
GTF2F1-201ENST00000394456 FOXI3A8MTJ6 420 aaPredicted RBP11.78□□□□□ -0.52
GTF2F1-201ENST00000394456 ZIC3O60481 467 aa11.78□□□□□ -0.52
GTF2F1-201ENST00000394456 SFTPBP07988 381 aa11.78□□□□□ -0.52
GTF2F1-201ENST00000394456 OR3A2P47893 321 aa11.78□□□□□ -0.52
GTF2F1-201ENST00000394456 CHAF1BQ13112 559 aa11.78□□□□□ -0.52
GTF2F1-201ENST00000394456 C5orf24Q7Z6I8 188 aa11.78□□□□□ -0.52
GTF2F1-201ENST00000394456 CBLN2Q8IUK8 224 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms