RNA–Protein interactions for RNA: ENST00000394269.7

TCOF1-203, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCOF1, Length 3,400 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-203ENST00000394269 WNT5BQ9H1J7 359 aa9.71□□□□□ -0.85
TCOF1-203ENST00000394269 PLEKHJ1Q9NW61 149 aa9.71□□□□□ -0.85
TCOF1-203ENST00000394269 KLF13Q9Y2Y9 288 aaPredicted RBP9.71□□□□□ -0.85
TCOF1-203ENST00000394269 TTLL8A6PVC2 850 aa9.71□□□□□ -0.86
TCOF1-203ENST00000394269 DISC1C4P0D8 188 aa9.71□□□□□ -0.86
TCOF1-203ENST00000394269 ARPC5O15511 151 aa9.71□□□□□ -0.86
TCOF1-203ENST00000394269 SYNGR3O43761 229 aa9.71□□□□□ -0.86
TCOF1-203ENST00000394269 HLA-AP01891 365 aaKnown RBP9.71□□□□□ -0.86
TCOF1-203ENST00000394269 APOC1P02654 83 aa9.71□□□□□ -0.86
TCOF1-203ENST00000394269 OR4E1P0C645 316 aa9.71□□□□□ -0.86
TCOF1-203ENST00000394269 OR3A3P47888 321 aa9.71□□□□□ -0.86
TCOF1-203ENST00000394269 OR3A2P47893 321 aa9.71□□□□□ -0.86
TCOF1-203ENST00000394269 RAG2P55895 527 aa9.71□□□□□ -0.86
TCOF1-203ENST00000394269 HLXQ14774 488 aaPredicted RBP9.71□□□□□ -0.86
TCOF1-203ENST00000394269 ASCL5Q7RTU5 278 aa9.71□□□□□ -0.86
TCOF1-203ENST00000394269 NUFIP2Q7Z417 695 aaKnown RBP9.71□□□□□ -0.86
TCOF1-203ENST00000394269 LYPD6Q86Y78 171 aa9.71□□□□□ -0.86
TCOF1-203ENST00000394269 BORCS8Q96FH0 119 aa9.71□□□□□ -0.86
TCOF1-203ENST00000394269 ZNF581Q9P0T4 197 aa9.71□□□□□ -0.86
TCOF1-203ENST00000394269 PCDHGA1Q9Y5H4 931 aa9.71□□□□□ -0.86
TCOF1-203ENST00000394269 TMEM14DPA8MWL7 114 aa9.7□□□□□ -0.86
TCOF1-203ENST00000394269 ZNF587BE7ETH6 402 aa9.7□□□□□ -0.86
TCOF1-203ENST00000394269 GFRA3O60609 400 aa9.7□□□□□ -0.86
TCOF1-203ENST00000394269 RAD51DO75771 328 aa9.7□□□□□ -0.86
TCOF1-203ENST00000394269 IL32P24001 234 aa9.7□□□□□ -0.86
TCOF1-203ENST00000394269 CSRP2Q16527 193 aa9.7□□□□□ -0.86
TCOF1-203ENST00000394269 DEFB109BQ30KR1 87 aa9.7□□□□□ -0.86
TCOF1-203ENST00000394269 DCAF12L2Q5VW00 463 aa9.7□□□□□ -0.86
TCOF1-203ENST00000394269 TMEM229BQ8NBD8 167 aa9.7□□□□□ -0.86
TCOF1-203ENST00000394269 FDCSPQ8NFU4 85 aa9.7□□□□□ -0.86
TCOF1-203ENST00000394269 OR5M9Q8NGP3 310 aa9.7□□□□□ -0.86
TCOF1-203ENST00000394269 AQP3Q92482 292 aa9.7□□□□□ -0.86
TCOF1-203ENST00000394269 ELMOD3Q96FG2 381 aa9.7□□□□□ -0.86
TCOF1-203ENST00000394269 ZNF629Q9UEG4 869 aaPredicted RBP9.7□□□□□ -0.86
TCOF1-203ENST00000394269 PTPN13Q12923 2485 aa9.7□□□□□ -0.86
TCOF1-203ENST00000394269 DNPH1O43598 174 aa9.7□□□□□ -0.86
TCOF1-203ENST00000394269 CST2P09228 141 aa9.7□□□□□ -0.86
TCOF1-203ENST00000394269 AMY2BP19961 511 aa9.7□□□□□ -0.86
TCOF1-203ENST00000394269 S100A1P23297 94 aa9.7□□□□□ -0.86
TCOF1-203ENST00000394269 QRFPP83859 136 aa9.7□□□□□ -0.86
TCOF1-203ENST00000394269 PLCXD3Q63HM9 321 aa9.7□□□□□ -0.86
TCOF1-203ENST00000394269 ZNF626Q68DY1 528 aa9.7□□□□□ -0.86
TCOF1-203ENST00000394269 DRAM2Q6UX65 266 aa9.7□□□□□ -0.86
TCOF1-203ENST00000394269 CDH24Q86UP0 819 aa9.7□□□□□ -0.86
TCOF1-203ENST00000394269 HDHD3Q9BSH5 251 aaPredicted RBP9.7□□□□□ -0.86
TCOF1-203ENST00000394269 SCPEP1Q9HB40 452 aa9.7□□□□□ -0.86
TCOF1-203ENST00000394269 PRR13Q9NZ81 148 aa9.7□□□□□ -0.86
TCOF1-203ENST00000394269 ITGB1BP2Q9UKP3 347 aa9.7□□□□□ -0.86
TCOF1-203ENST00000394269 NBEAQ8NFP9 2946 aa9.7□□□□□ -0.86
TCOF1-203ENST00000394269 RELNP78509 3460 aa9.7□□□□□ -0.86
TCOF1-203ENST00000394269 TERTO14746 1132 aaKnown RBP9.7□□□□□ -0.86
TCOF1-203ENST00000394269 NRASP01111 189 aa9.7□□□□□ -0.86
TCOF1-203ENST00000394269 RAB6AP20340 208 aa9.7□□□□□ -0.86
TCOF1-203ENST00000394269 H2BFSP57053 126 aa9.7□□□□□ -0.86
TCOF1-203ENST00000394269 SOX8P57073 446 aa9.7□□□□□ -0.86
TCOF1-203ENST00000394269 GMFBP60983 142 aa9.7□□□□□ -0.86
TCOF1-203ENST00000394269 LGALSLQ3ZCW2 172 aaPredicted RBP9.7□□□□□ -0.86
TCOF1-203ENST00000394269 HIKESHIQ53FT3 197 aa9.7□□□□□ -0.86
TCOF1-203ENST00000394269 ATPAF1Q5TC12 328 aaPredicted RBP9.7□□□□□ -0.86
TCOF1-203ENST00000394269 ABLIM2Q6H8Q1 611 aa9.7□□□□□ -0.86
TCOF1-203ENST00000394269 P4HA3Q7Z4N8 544 aa9.7□□□□□ -0.86
TCOF1-203ENST00000394269 CSNK2A3Q8NEV1 391 aa9.7□□□□□ -0.86
TCOF1-203ENST00000394269 MARCH1Q8TCQ1 289 aa9.7□□□□□ -0.86
TCOF1-203ENST00000394269 DYRK2Q92630 601 aa9.7□□□□□ -0.86
TCOF1-203ENST00000394269 CHST5Q9GZS9 411 aa9.7□□□□□ -0.86
TCOF1-203ENST00000394269 SLA2Q9H6Q3 261 aa9.7□□□□□ -0.86
TCOF1-203ENST00000394269 PARPBPQ9NWS1 579 aa9.7□□□□□ -0.86
TCOF1-203ENST00000394269 EMC3Q9P0I2 261 aa9.7□□□□□ -0.86
TCOF1-203ENST00000394269 LUZP4Q9P127 313 aa9.7□□□□□ -0.86
TCOF1-203ENST00000394269 PRSS50Q9UI38 385 aa9.7□□□□□ -0.86
TCOF1-203ENST00000394269 TRGV5A0A0B4J1U4 118 aa9.69□□□□□ -0.86
TCOF1-203ENST00000394269 C13orf42A0A1B0GVH6 325 aa9.69□□□□□ -0.86
TCOF1-203ENST00000394269 SERPINA5P05154 406 aa9.69□□□□□ -0.86
TCOF1-203ENST00000394269 HIST1H1DP16402 221 aaKnown RBP9.69□□□□□ -0.86
TCOF1-203ENST00000394269 WT1P19544 449 aaPredicted RBP9.69□□□□□ -0.86
TCOF1-203ENST00000394269 OPRM1P35372 400 aa9.69□□□□□ -0.86
TCOF1-203ENST00000394269 PCBD1P61457 104 aa9.69□□□□□ -0.86
TCOF1-203ENST00000394269 RAB1AP62820 205 aa9.69□□□□□ -0.86
TCOF1-203ENST00000394269 SPATA46Q5T0L3 261 aa9.69□□□□□ -0.86
TCOF1-203ENST00000394269 FAM219AQ8IW50 185 aa9.69□□□□□ -0.86
TCOF1-203ENST00000394269 OR56B1Q8NGI3 324 aa9.69□□□□□ -0.86
TCOF1-203ENST00000394269 PAPOLGQ9BWT3 736 aaKnown RBP9.69□□□□□ -0.86
TCOF1-203ENST00000394269 CLEC4MQ9H2X3 399 aaPredicted RBP9.69□□□□□ -0.86
TCOF1-203ENST00000394269 RALYQ9UKM9 306 aaKnown RBP9.69□□□□□ -0.86
TCOF1-203ENST00000394269 A0A0U1RQV5 110 aa9.69□□□□□ -0.86
TCOF1-203ENST00000394269 ZNF850A8MQ14 1090 aa9.69□□□□□ -0.86
TCOF1-203ENST00000394269 C3orf80F5H4A9 247 aa9.69□□□□□ -0.86
TCOF1-203ENST00000394269 SSX5O60225 188 aa9.69□□□□□ -0.86
TCOF1-203ENST00000394269 HPNP05981 417 aa9.69□□□□□ -0.86
TCOF1-203ENST00000394269 CHRM2P08172 466 aa9.69□□□□□ -0.86
TCOF1-203ENST00000394269 RRADP55042 308 aa9.69□□□□□ -0.86
TCOF1-203ENST00000394269 THOC7Q6I9Y2 204 aaKnown RBP9.69□□□□□ -0.86
TCOF1-203ENST00000394269 OR2AK2Q8NG84 335 aa9.69□□□□□ -0.86
TCOF1-203ENST00000394269 PP6455Q8WZ26 134 aa9.69□□□□□ -0.86
TCOF1-203ENST00000394269 SMG1Q96Q15 3661 aaKnown RBP9.69□□□□□ -0.86
TCOF1-203ENST00000394269 SULT1C2O00338 296 aa9.69□□□□□ -0.86
TCOF1-203ENST00000394269 NGFP01138 241 aa9.69□□□□□ -0.86
TCOF1-203ENST00000394269 ZNF708P17019 499 aa9.69□□□□□ -0.86
TCOF1-203ENST00000394269 THBS4P35443 961 aa9.69□□□□□ -0.86
TCOF1-203ENST00000394269 GSK3AP49840 483 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms