RNA–Protein interactions for RNA: ENST00000394082.8

SNRPA1-202, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-202ENST00000394082 DHFR2Q86XF0 187 aa14.3□□□□□ -0.12
SNRPA1-202ENST00000394082 DTX3Q8N9I9 347 aa14.3□□□□□ -0.12
SNRPA1-202ENST00000394082 OR10G2Q8NGC3 310 aa14.3□□□□□ -0.12
SNRPA1-202ENST00000394082 OR5T2Q8NGG2 359 aa14.3□□□□□ -0.12
SNRPA1-202ENST00000394082 OR5D13Q8NGL4 314 aa14.3□□□□□ -0.12
SNRPA1-202ENST00000394082 HPSE2Q8WWQ2 592 aa14.3□□□□□ -0.12
SNRPA1-202ENST00000394082 H1FXQ92522 213 aaKnown RBP14.3□□□□□ -0.12
SNRPA1-202ENST00000394082 RPL3LQ92901 407 aaKnown RBP14.3□□□□□ -0.12
SNRPA1-202ENST00000394082 RNF170Q96K19 258 aa14.3□□□□□ -0.12
SNRPA1-202ENST00000394082 NIPSNAP1Q9BPW8 284 aa14.3□□□□□ -0.12
SNRPA1-202ENST00000394082 FAM234AQ9H0X4 552 aa14.3□□□□□ -0.12
SNRPA1-202ENST00000394082 NLKQ9UBE8 527 aa14.3□□□□□ -0.12
SNRPA1-202ENST00000394082 SF3B6Q9Y3B4 125 aaKnown RBP14.3□□□□□ -0.12
SNRPA1-202ENST00000394082 OR2AT4A6NND4 320 aa14.29□□□□□ -0.12
SNRPA1-202ENST00000394082 SELLP14151 372 aa14.29□□□□□ -0.12
SNRPA1-202ENST00000394082 TRIM25Q14258 630 aaKnown RBP14.29□□□□□ -0.12
SNRPA1-202ENST00000394082 SLC35E4Q6ICL7 350 aa14.29□□□□□ -0.12
SNRPA1-202ENST00000394082 ZDHHC23Q8IYP9 409 aa14.29□□□□□ -0.12
SNRPA1-202ENST00000394082 LYZL4Q96KX0 146 aa14.29□□□□□ -0.12
SNRPA1-202ENST00000394082 HIST1H2AAQ96QV6 131 aa14.29□□□□□ -0.12
SNRPA1-202ENST00000394082 FEVQ99581 238 aa14.29□□□□□ -0.12
SNRPA1-202ENST00000394082 MEGF9Q9H1U4 602 aa14.29□□□□□ -0.12
SNRPA1-202ENST00000394082 MED20Q9H944 212 aa14.29□□□□□ -0.12
SNRPA1-202ENST00000394082 BRD7Q9NPI1 651 aa14.29□□□□□ -0.12
SNRPA1-202ENST00000394082 A0A0U1RQV5 110 aa14.28□□□□□ -0.12
SNRPA1-202ENST00000394082 ANKRD61A6NGH8 418 aa14.28□□□□□ -0.12
SNRPA1-202ENST00000394082 H3BN98 237 aa14.28□□□□□ -0.12
SNRPA1-202ENST00000394082 AKR7A2O43488 359 aa14.28□□□□□ -0.12
SNRPA1-202ENST00000394082 ATP6V1B1P15313 513 aa14.28□□□□□ -0.12
SNRPA1-202ENST00000394082 HOXB6P17509 224 aaKnown RBP14.28□□□□□ -0.12
SNRPA1-202ENST00000394082 KIR2DS4P43632 304 aa14.28□□□□□ -0.12
SNRPA1-202ENST00000394082 GNG3P63215 75 aa14.28□□□□□ -0.12
SNRPA1-202ENST00000394082 EGR3Q06889 387 aa14.28□□□□□ -0.12
SNRPA1-202ENST00000394082 KLRD1Q13241 179 aa14.28□□□□□ -0.12
SNRPA1-202ENST00000394082 SLC35D3Q5M8T2 416 aa14.28□□□□□ -0.12
SNRPA1-202ENST00000394082 DEGS2Q6QHC5 323 aa14.28□□□□□ -0.12
SNRPA1-202ENST00000394082 ZNF671Q8TAW3 534 aa14.28□□□□□ -0.12
SNRPA1-202ENST00000394082 GIPC3Q8TF64 312 aa14.28□□□□□ -0.12
SNRPA1-202ENST00000394082 THEM6Q8WUY1 208 aa14.28□□□□□ -0.12
SNRPA1-202ENST00000394082 PIGCQ92535 297 aa14.28□□□□□ -0.12
SNRPA1-202ENST00000394082 DUS3LQ96G46 650 aaKnown RBP14.28□□□□□ -0.12
SNRPA1-202ENST00000394082 SDSLQ96GA7 329 aa14.28□□□□□ -0.12
SNRPA1-202ENST00000394082 FGF23Q9GZV9 251 aaPredicted RBP14.28□□□□□ -0.12
SNRPA1-202ENST00000394082 OR51V1Q9H2C8 321 aa14.28□□□□□ -0.12
SNRPA1-202ENST00000394082 OR51I2Q9H344 312 aa14.28□□□□□ -0.12
SNRPA1-202ENST00000394082 RANBP3Q9H6Z4 567 aaPredicted RBP14.28□□□□□ -0.12
SNRPA1-202ENST00000394082 RAB18Q9NP72 206 aa14.28□□□□□ -0.12
SNRPA1-202ENST00000394082 SNTG1Q9NSN8 517 aa14.28□□□□□ -0.12
SNRPA1-202ENST00000394082 RASL12Q9NYN1 266 aa14.28□□□□□ -0.12
SNRPA1-202ENST00000394082 ZNF222Q9UK12 451 aa14.28□□□□□ -0.12
SNRPA1-202ENST00000394082 LRP12Q9Y561 859 aa14.28□□□□□ -0.12
SNRPA1-202ENST00000394082 MAB21L2Q9Y586 359 aa14.28□□□□□ -0.12
SNRPA1-202ENST00000394082 IGKV1D-17A0A075B6S4 117 aa14.27□□□□□ -0.13
SNRPA1-202ENST00000394082 A0A1W2PQ09 198 aa14.27□□□□□ -0.13
SNRPA1-202ENST00000394082 OR5B21A6NL26 309 aa14.27□□□□□ -0.13
SNRPA1-202ENST00000394082 PRR23D1E9PI22 279 aaPredicted RBP14.27□□□□□ -0.13
SNRPA1-202ENST00000394082 HMGN1P05114 100 aa14.27□□□□□ -0.13
SNRPA1-202ENST00000394082 CSF1P09603 554 aa14.27□□□□□ -0.13
SNRPA1-202ENST00000394082 PRR23D2P0DMB1 279 aaPredicted RBP14.27□□□□□ -0.13
SNRPA1-202ENST00000394082 RAP2AP10114 183 aa14.27□□□□□ -0.13
SNRPA1-202ENST00000394082 NDUFB7P17568 137 aa14.27□□□□□ -0.13
SNRPA1-202ENST00000394082 GLRA1P23415 457 aa14.27□□□□□ -0.13
SNRPA1-202ENST00000394082 GABRA5P31644 462 aa14.27□□□□□ -0.13
SNRPA1-202ENST00000394082 MAP2K3P46734 347 aa14.27□□□□□ -0.13
SNRPA1-202ENST00000394082 HERPUD1Q15011 391 aa14.27□□□□□ -0.13
SNRPA1-202ENST00000394082 CEACAM21Q3KPI0 293 aa14.27□□□□□ -0.13
SNRPA1-202ENST00000394082 ZBTB37Q5TC79 503 aa14.27□□□□□ -0.13
SNRPA1-202ENST00000394082 KCTD8Q6ZWB6 473 aa14.27□□□□□ -0.13
SNRPA1-202ENST00000394082 OR8B12Q8NGG6 310 aa14.27□□□□□ -0.13
SNRPA1-202ENST00000394082 OR5A2Q8NGI9 324 aa14.27□□□□□ -0.13
SNRPA1-202ENST00000394082 PSG2P11465 335 aa14.26□□□□□ -0.13
SNRPA1-202ENST00000394082 ALOX5APP20292 161 aa14.26□□□□□ -0.13
SNRPA1-202ENST00000394082 GPM6AP51674 278 aa14.26□□□□□ -0.13
SNRPA1-202ENST00000394082 EFNB2P52799 333 aa14.26□□□□□ -0.13
SNRPA1-202ENST00000394082 HCP5Q6MZN7 132 aa14.26□□□□□ -0.13
SNRPA1-202ENST00000394082 PLBD1Q6P4A8 553 aa14.26□□□□□ -0.13
SNRPA1-202ENST00000394082 LIAT1Q6ZQX7 453 aa14.26□□□□□ -0.13
SNRPA1-202ENST00000394082 Q6ZTK2 550 aa14.26□□□□□ -0.13
SNRPA1-202ENST00000394082 IQCF1Q8N6M8 205 aa14.26□□□□□ -0.13
SNRPA1-202ENST00000394082 OR5K1Q8NHB7 308 aa14.26□□□□□ -0.13
SNRPA1-202ENST00000394082 CFHR4Q92496 578 aa14.26□□□□□ -0.13
SNRPA1-202ENST00000394082 OTULINQ96BN8 352 aa14.26□□□□□ -0.13
SNRPA1-202ENST00000394082 AJUBAQ96IF1 538 aa14.26□□□□□ -0.13
SNRPA1-202ENST00000394082 SSX3Q99909 188 aa14.26□□□□□ -0.13
SNRPA1-202ENST00000394082 PPA2Q9H2U2 334 aa14.26□□□□□ -0.13
SNRPA1-202ENST00000394082 TET2Q6N021 2002 aaPredicted RBP14.25□□□□□ -0.13
SNRPA1-202ENST00000394082 A0A1W2PPH5 198 aa14.25□□□□□ -0.13
SNRPA1-202ENST00000394082 B2RBV5 119 aa14.25□□□□□ -0.13
SNRPA1-202ENST00000394082 SELENOFO60613 162 aa14.25□□□□□ -0.13
SNRPA1-202ENST00000394082 RHBDL1O75783 438 aa14.25□□□□□ -0.13
SNRPA1-202ENST00000394082 IGLV3-1P01715 115 aa14.25□□□□□ -0.13
SNRPA1-202ENST00000394082 OPN1MWP04001 364 aa14.25□□□□□ -0.13
SNRPA1-202ENST00000394082 OPN1MW2P0DN77 364 aa14.25□□□□□ -0.13
SNRPA1-202ENST00000394082 OPN1MW3P0DN78 364 aa14.25□□□□□ -0.13
SNRPA1-202ENST00000394082 POU1F1P28069 291 aa14.25□□□□□ -0.13
SNRPA1-202ENST00000394082 DLX1P56177 255 aa14.25□□□□□ -0.13
SNRPA1-202ENST00000394082 GMFBP60983 142 aa14.25□□□□□ -0.13
SNRPA1-202ENST00000394082 CDK5Q00535 292 aa14.25□□□□□ -0.13
SNRPA1-202ENST00000394082 MS4A2Q01362 244 aa14.25□□□□□ -0.13
SNRPA1-202ENST00000394082 LCN1P1Q5VSP4 162 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms