RNA–Protein interactions for RNA: ENST00000393824.7

CUX1-204, Transcript of cut like homeobox 1, humanhuman

TSL 2 BASIC

Gene CUX1, Length 2,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-204ENST00000393824 ARG1P05089 322 aa9.85□□□□□ -0.83
CUX1-204ENST00000393824 PET100P0DJ07 73 aa9.85□□□□□ -0.83
CUX1-204ENST00000393824 FBLP22087 321 aaKnown RBP9.85□□□□□ -0.83
CUX1-204ENST00000393824 RAC1P63000 192 aa9.85□□□□□ -0.83
CUX1-204ENST00000393824 TRA2AQ13595 282 aaKnown RBP eCLIP9.85□□□□□ -0.83
CUX1-204ENST00000393824 GXYLT1Q4G148 440 aa9.85□□□□□ -0.83
CUX1-204ENST00000393824 DPY19L4Q7Z388 723 aa9.85□□□□□ -0.83
CUX1-204ENST00000393824 FJX1Q86VR8 437 aa9.85□□□□□ -0.83
CUX1-204ENST00000393824 HOGA1Q86XE5 327 aa9.85□□□□□ -0.83
CUX1-204ENST00000393824 MISP3Q96FF7 219 aa9.85□□□□□ -0.83
CUX1-204ENST00000393824 VN1R1Q9GZP7 353 aa9.85□□□□□ -0.83
CUX1-204ENST00000393824 SPACA1Q9HBV2 294 aa9.85□□□□□ -0.83
CUX1-204ENST00000393824 PRTFDC1Q9NRG1 225 aa9.85□□□□□ -0.83
CUX1-204ENST00000393824 FOXJ2Q9P0K8 574 aa9.85□□□□□ -0.83
CUX1-204ENST00000393824 MEGF11A6BM72 1044 aa9.84□□□□□ -0.83
CUX1-204ENST00000393824 WIPF3A6NGB9 483 aa9.84□□□□□ -0.83
CUX1-204ENST00000393824 C9orf172C9J069 976 aa9.84□□□□□ -0.83
CUX1-204ENST00000393824 OR10H2O60403 315 aa9.84□□□□□ -0.83
CUX1-204ENST00000393824 DKK1O94907 266 aa9.84□□□□□ -0.83
CUX1-204ENST00000393824 GAPDHP04406 335 aaKnown RBP9.84□□□□□ -0.83
CUX1-204ENST00000393824 HCKP08631 526 aa9.84□□□□□ -0.83
CUX1-204ENST00000393824 PAX1P15863 534 aa9.84□□□□□ -0.83
CUX1-204ENST00000393824 FSTP19883 344 aa9.84□□□□□ -0.83
CUX1-204ENST00000393824 RAB6AP20340 208 aa9.84□□□□□ -0.83
CUX1-204ENST00000393824 S1PR1P21453 382 aa9.84□□□□□ -0.83
CUX1-204ENST00000393824 DDTP30046 118 aa9.84□□□□□ -0.83
CUX1-204ENST00000393824 ID4P47928 161 aa9.84□□□□□ -0.83
CUX1-204ENST00000393824 PKIAP61925 76 aa9.84□□□□□ -0.83
CUX1-204ENST00000393824 FAM3AP98173 230 aa9.84□□□□□ -0.83
CUX1-204ENST00000393824 BHLHE23Q8NDY6 225 aa9.84□□□□□ -0.83
CUX1-204ENST00000393824 OR6X1Q8NH79 312 aa9.84□□□□□ -0.83
CUX1-204ENST00000393824 STT3BQ8TCJ2 826 aa9.84□□□□□ -0.83
CUX1-204ENST00000393824 ROBO4Q8WZ75 1007 aa9.84□□□□□ -0.83
CUX1-204ENST00000393824 MVB12AQ96EY5 273 aa9.84□□□□□ -0.83
CUX1-204ENST00000393824 CMKLR1Q99788 373 aa9.84□□□□□ -0.83
CUX1-204ENST00000393824 BCO1Q9HAY6 547 aa9.84□□□□□ -0.83
CUX1-204ENST00000393824 SRA1Q9HD15 236 aaKnown RBP9.84□□□□□ -0.83
CUX1-204ENST00000393824 ZZEF1O43149 2961 aa9.84□□□□□ -0.83
CUX1-204ENST00000393824 SDK2Q58EX2 2172 aa9.84□□□□□ -0.83
CUX1-204ENST00000393824 IGKV3D-11A0A0A0MRZ8 115 aa9.84□□□□□ -0.83
CUX1-204ENST00000393824 A0A1W2PPE2 198 aa9.84□□□□□ -0.83
CUX1-204ENST00000393824 SERINC4A6NH21 518 aa9.84□□□□□ -0.83
CUX1-204ENST00000393824 MARCH11A6NNE9 402 aa9.84□□□□□ -0.83
CUX1-204ENST00000393824 CEACAM18A8MTB9 384 aa9.84□□□□□ -0.83
CUX1-204ENST00000393824 SEC14L6B5MCN3 397 aa9.84□□□□□ -0.83
CUX1-204ENST00000393824 RAB27BO00194 218 aa9.84□□□□□ -0.83
CUX1-204ENST00000393824 JTBO76095 146 aa9.84□□□□□ -0.83
CUX1-204ENST00000393824 IGKV1D-16P01601 117 aa9.84□□□□□ -0.83
CUX1-204ENST00000393824 NR2C1P13056 603 aa9.84□□□□□ -0.83
CUX1-204ENST00000393824 HRH1P35367 487 aa9.84□□□□□ -0.83
CUX1-204ENST00000393824 IL11RAQ14626 422 aa9.84□□□□□ -0.83
CUX1-204ENST00000393824 GUK1Q16774 197 aa9.84□□□□□ -0.83
CUX1-204ENST00000393824 C1orf100Q5SVJ3 147 aa9.84□□□□□ -0.83
CUX1-204ENST00000393824 TIPARPQ7Z3E1 657 aaKnown RBP9.84□□□□□ -0.83
CUX1-204ENST00000393824 MDGA2Q7Z553 956 aa9.84□□□□□ -0.83
CUX1-204ENST00000393824 TRAPPC6BQ86SZ2 158 aa9.84□□□□□ -0.83
CUX1-204ENST00000393824 OR6N2Q8NGY6 317 aa9.84□□□□□ -0.83
CUX1-204ENST00000393824 ASB5Q8WWX0 329 aa9.84□□□□□ -0.83
CUX1-204ENST00000393824 POM121Q96HA1 1249 aa9.84□□□□□ -0.83
CUX1-204ENST00000393824 NKX3-1Q99801 234 aaPredicted RBP9.84□□□□□ -0.83
CUX1-204ENST00000393824 PIGQQ9BRB3 760 aa9.84□□□□□ -0.83
CUX1-204ENST00000393824 DOK5Q9P104 306 aa9.84□□□□□ -0.83
CUX1-204ENST00000393824 CKLFQ9UBR5 152 aa9.84□□□□□ -0.83
CUX1-204ENST00000393824 HDGFL3Q9Y3E1 203 aa9.84□□□□□ -0.83
CUX1-204ENST00000393824 IGKV1D-42A0A075B6H8 117 aa9.83□□□□□ -0.84
CUX1-204ENST00000393824 RPL36A-HNRNPH2H7BZ11 118 aa9.83□□□□□ -0.84
CUX1-204ENST00000393824 SFT2D2O95562 160 aa9.83□□□□□ -0.84
CUX1-204ENST00000393824 TSPAN15O95858 294 aa9.83□□□□□ -0.84
CUX1-204ENST00000393824 CSTAP01040 98 aa9.83□□□□□ -0.84
CUX1-204ENST00000393824 SLC26A5P58743 744 aa9.83□□□□□ -0.84
CUX1-204ENST00000393824 NUTF2P61970 127 aaKnown RBP9.83□□□□□ -0.84
CUX1-204ENST00000393824 IGLV3-21P80748 117 aaPredicted RBP9.83□□□□□ -0.84
CUX1-204ENST00000393824 EBPQ15125 230 aaKnown RBP9.83□□□□□ -0.84
CUX1-204ENST00000393824 ZNF74Q16587 644 aa9.83□□□□□ -0.84
CUX1-204ENST00000393824 AARDQ4LEZ3 155 aa9.83□□□□□ -0.84
CUX1-204ENST00000393824 ALG10Q5BKT4 473 aa9.83□□□□□ -0.84
CUX1-204ENST00000393824 PRR18Q8N4B5 295 aa9.83□□□□□ -0.84
CUX1-204ENST00000393824 GVQW1Q8N7I0 195 aa9.83□□□□□ -0.84
CUX1-204ENST00000393824 OR9K2Q8NGE7 335 aa9.83□□□□□ -0.84
CUX1-204ENST00000393824 PTPMT1Q8WUK0 201 aaPredicted RBP9.83□□□□□ -0.84
CUX1-204ENST00000393824 C2orf50Q96LR7 162 aa9.83□□□□□ -0.84
CUX1-204ENST00000393824 VSTM2LQ96N03 204 aa9.83□□□□□ -0.84
CUX1-204ENST00000393824 OR8B4Q96RC9 309 aa9.83□□□□□ -0.84
CUX1-204ENST00000393824 C20orf24Q9BUV8 137 aa9.83□□□□□ -0.84
CUX1-204ENST00000393824 SLC26A1Q9H2B4 701 aa9.83□□□□□ -0.84
CUX1-204ENST00000393824 GPR132Q9UNW8 380 aa9.83□□□□□ -0.84
CUX1-204ENST00000393824 SRPK3Q9UPE1 567 aa9.83□□□□□ -0.84
CUX1-204ENST00000393824 WASF3Q9UPY6 502 aa9.83□□□□□ -0.84
CUX1-204ENST00000393824 DHDHQ9UQ10 334 aa9.83□□□□□ -0.84
CUX1-204ENST00000393824 TMED3Q9Y3Q3 217 aa9.83□□□□□ -0.84
CUX1-204ENST00000393824 CXorf65A6NEN9 183 aa9.83□□□□□ -0.84
CUX1-204ENST00000393824 UMAD1C9J7I0 102 aa9.83□□□□□ -0.84
CUX1-204ENST00000393824 ADAP1O75689 374 aa9.83□□□□□ -0.84
CUX1-204ENST00000393824 GPANK1O95872 356 aa9.83□□□□□ -0.84
CUX1-204ENST00000393824 RENP00797 406 aa9.83□□□□□ -0.84
CUX1-204ENST00000393824 CLPSP04118 112 aa9.83□□□□□ -0.84
CUX1-204ENST00000393824 IFNA6P05013 189 aa9.83□□□□□ -0.84
CUX1-204ENST00000393824 F13BP05160 661 aa9.83□□□□□ -0.84
CUX1-204ENST00000393824 CEACAM6P40199 344 aa9.83□□□□□ -0.84
CUX1-204ENST00000393824 CTXN1P60606 82 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms