RNA–Protein interactions for RNA: ENST00000393454.6

TDP1-203, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 2,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-203ENST00000393454 OR51T1Q8NGJ9 327 aa7.45□□□□□ -1.22
TDP1-203ENST00000393454 UBASH3BQ8TF42 649 aa7.45□□□□□ -1.22
TDP1-203ENST00000393454 S100PBPQ96BU1 408 aa7.45□□□□□ -1.22
TDP1-203ENST00000393454 CMBLQ96DG6 245 aa7.45□□□□□ -1.22
TDP1-203ENST00000393454 WBP1Q96G27 269 aa7.45□□□□□ -1.22
TDP1-203ENST00000393454 BOD1Q96IK1 185 aa7.45□□□□□ -1.22
TDP1-203ENST00000393454 RNF170Q96K19 258 aa7.45□□□□□ -1.22
TDP1-203ENST00000393454 TECTBQ96PL2 329 aa7.45□□□□□ -1.22
TDP1-203ENST00000393454 HIST1H2AAQ96QV6 131 aa7.45□□□□□ -1.22
TDP1-203ENST00000393454 CST11Q9H112 138 aa7.45□□□□□ -1.22
TDP1-203ENST00000393454 ZMAT3Q9HA38 289 aaKnown RBP7.45□□□□□ -1.22
TDP1-203ENST00000393454 OBP2BQ9NPH6 170 aa7.45□□□□□ -1.22
TDP1-203ENST00000393454 KLK11Q9UBX7 282 aa7.45□□□□□ -1.22
TDP1-203ENST00000393454 AMDHD2Q9Y303 409 aa7.45□□□□□ -1.22
TDP1-203ENST00000393454 CACNA1AO00555 2505 aa7.44□□□□□ -1.22
TDP1-203ENST00000393454 IGKV1-27A0A075B6S5 117 aa7.44□□□□□ -1.22
TDP1-203ENST00000393454 A0A0A6YYH2 397 aa7.44□□□□□ -1.22
TDP1-203ENST00000393454 TRGV8A0A0C4DH27 118 aa7.44□□□□□ -1.22
TDP1-203ENST00000393454 MED19A0JLT2 244 aaPredicted RBP7.44□□□□□ -1.22
TDP1-203ENST00000393454 FUOMA2VDF0 154 aa7.44□□□□□ -1.22
TDP1-203ENST00000393454 A6NJ64 397 aa7.44□□□□□ -1.22
TDP1-203ENST00000393454 MSTNO14793 375 aa7.44□□□□□ -1.22
TDP1-203ENST00000393454 ANGPTL7O43827 346 aa7.44□□□□□ -1.22
TDP1-203ENST00000393454 SMPD2O60906 423 aa7.44□□□□□ -1.22
TDP1-203ENST00000393454 RBBP9O75884 186 aa7.44□□□□□ -1.22
TDP1-203ENST00000393454 HTR3BO95264 441 aa7.44□□□□□ -1.22
TDP1-203ENST00000393454 ECDO95905 644 aaPredicted RBP7.44□□□□□ -1.22
TDP1-203ENST00000393454 IGKV3-15P01624 115 aa7.44□□□□□ -1.22
TDP1-203ENST00000393454 FCER2P06734 321 aa7.44□□□□□ -1.22
TDP1-203ENST00000393454 GSTT2BP0CG30 244 aa7.44□□□□□ -1.22
TDP1-203ENST00000393454 KIR2DL3P43628 341 aa7.44□□□□□ -1.22
TDP1-203ENST00000393454 ZNF83P51522 516 aa7.44□□□□□ -1.22
TDP1-203ENST00000393454 BCAP31P51572 246 aa7.44□□□□□ -1.22
TDP1-203ENST00000393454 UCP2P55851 309 aa7.44□□□□□ -1.22
TDP1-203ENST00000393454 ERVS71-1P61550 626 aa7.44□□□□□ -1.22
TDP1-203ENST00000393454 RSU1Q15404 277 aa7.44□□□□□ -1.22
TDP1-203ENST00000393454 CRIP3Q6Q6R5 217 aa7.44□□□□□ -1.22
TDP1-203ENST00000393454 GLCCI1Q86VQ1 547 aa7.44□□□□□ -1.22
TDP1-203ENST00000393454 ZDHHC23Q8IYP9 409 aa7.44□□□□□ -1.22
TDP1-203ENST00000393454 OR1J1Q8NGS3 322 aa7.44□□□□□ -1.22
TDP1-203ENST00000393454 MUCL1Q96DR8 90 aa7.44□□□□□ -1.22
TDP1-203ENST00000393454 C1orf147Q96MC9 270 aaPredicted RBP7.44□□□□□ -1.22
TDP1-203ENST00000393454 NICN1Q9BSH3 213 aa7.44□□□□□ -1.22
TDP1-203ENST00000393454 URM1Q9BTM9 101 aaKnown RBP7.44□□□□□ -1.22
TDP1-203ENST00000393454 OR2J1Q9GZK6 312 aa7.44□□□□□ -1.22
TDP1-203ENST00000393454 METTL9Q9H1A3 318 aa7.44□□□□□ -1.22
TDP1-203ENST00000393454 PIGMQ9H3S5 423 aa7.44□□□□□ -1.22
TDP1-203ENST00000393454 CRIM1Q9NZV1 1036 aa7.44□□□□□ -1.22
TDP1-203ENST00000393454 NLKQ9UBE8 527 aa7.44□□□□□ -1.22
TDP1-203ENST00000393454 GHRLQ9UBU3 117 aa7.44□□□□□ -1.22
TDP1-203ENST00000393454 FBLN5Q9UBX5 448 aa7.44□□□□□ -1.22
TDP1-203ENST00000393454 ZNF629Q9UEG4 869 aaPredicted RBP7.44□□□□□ -1.22
TDP1-203ENST00000393454 SPTA1P02549 2419 aa7.44□□□□□ -1.22
TDP1-203ENST00000393454 A8MXE2 369 aa7.43□□□□□ -1.22
TDP1-203ENST00000393454 SCGNO76038 276 aa7.43□□□□□ -1.22
TDP1-203ENST00000393454 CST4P01036 141 aa7.43□□□□□ -1.22
TDP1-203ENST00000393454 MT-ND4P03905 459 aa7.43□□□□□ -1.22
TDP1-203ENST00000393454 CSTBP04080 98 aaKnown RBP7.43□□□□□ -1.22
TDP1-203ENST00000393454 CHRM2P08172 466 aa7.43□□□□□ -1.22
TDP1-203ENST00000393454 CECR9P0C854 216 aa7.43□□□□□ -1.22
TDP1-203ENST00000393454 NAT2P11245 290 aa7.43□□□□□ -1.22
TDP1-203ENST00000393454 MGMTP16455 207 aa7.43□□□□□ -1.22
TDP1-203ENST00000393454 CASP6P55212 293 aa7.43□□□□□ -1.22
TDP1-203ENST00000393454 AP3S2P59780 193 aa7.43□□□□□ -1.22
TDP1-203ENST00000393454 FAM27E3Q08E93 113 aa7.43□□□□□ -1.22
TDP1-203ENST00000393454 SNTB2Q13425 540 aaKnown RBP7.43□□□□□ -1.22
TDP1-203ENST00000393454 LY6DQ14210 128 aa7.43□□□□□ -1.22
TDP1-203ENST00000393454 FAM189A2Q15884 450 aa7.43□□□□□ -1.22
TDP1-203ENST00000393454 CDNFQ49AH0 187 aa7.43□□□□□ -1.22
TDP1-203ENST00000393454 RSBN1Q5VWQ0 802 aaPredicted RBP7.43□□□□□ -1.22
TDP1-203ENST00000393454 PLET1Q6UQ28 207 aa7.43□□□□□ -1.22
TDP1-203ENST00000393454 Q6ZTK2 550 aa7.43□□□□□ -1.22
TDP1-203ENST00000393454 OR10R2Q8NGX6 335 aa7.43□□□□□ -1.22
TDP1-203ENST00000393454 SLC25A40Q8TBP6 338 aa7.43□□□□□ -1.22
TDP1-203ENST00000393454 DVL3Q92997 716 aaPredicted RBP7.43□□□□□ -1.22
TDP1-203ENST00000393454 SELENOIQ9C0D9 397 aa7.43□□□□□ -1.22
TDP1-203ENST00000393454 LPAR5Q9H1C0 372 aa7.43□□□□□ -1.22
TDP1-203ENST00000393454 PRORYQ9H606 182 aa7.43□□□□□ -1.22
TDP1-203ENST00000393454 SLC25A15Q9Y619 301 aa7.43□□□□□ -1.22
TDP1-203ENST00000393454 PRR14LQ5THK1 2151 aa7.43□□□□□ -1.22
TDP1-203ENST00000393454 IGHV1-18A0A0C4DH31 117 aa7.43□□□□□ -1.22
TDP1-203ENST00000393454 TMEM235A6NFC5 223 aa7.43□□□□□ -1.22
TDP1-203ENST00000393454 J3QW42 95 aa7.43□□□□□ -1.22
TDP1-203ENST00000393454 M0R1B8 84 aa7.43□□□□□ -1.22
TDP1-203ENST00000393454 RAB27BO00194 218 aa7.43□□□□□ -1.22
TDP1-203ENST00000393454 RAD52P43351 418 aa7.43□□□□□ -1.22
TDP1-203ENST00000393454 ALDH3B1P43353 468 aa7.43□□□□□ -1.22
TDP1-203ENST00000393454 GPM6AP51674 278 aa7.43□□□□□ -1.22
TDP1-203ENST00000393454 ZP1P60852 638 aa7.43□□□□□ -1.22
TDP1-203ENST00000393454 RPS27AP62979 156 aaKnown RBP7.43□□□□□ -1.22
TDP1-203ENST00000393454 KLF9Q13886 244 aaPredicted RBP7.43□□□□□ -1.22
TDP1-203ENST00000393454 PPA1Q15181 289 aa7.43□□□□□ -1.22
TDP1-203ENST00000393454 CARTPTQ16568 116 aa7.43□□□□□ -1.22
TDP1-203ENST00000393454 PCGF3Q3KNV8 242 aa7.43□□□□□ -1.22
TDP1-203ENST00000393454 TIMM23BQ5SRD1 257 aa7.43□□□□□ -1.22
TDP1-203ENST00000393454 UNQ6126/PRO20091Q6UXV3 157 aa7.43□□□□□ -1.22
TDP1-203ENST00000393454 STEAP2Q8NFT2 490 aa7.43□□□□□ -1.22
TDP1-203ENST00000393454 OR56B1Q8NGI3 324 aa7.43□□□□□ -1.22
TDP1-203ENST00000393454 ITPKCQ96DU7 683 aa7.43□□□□□ -1.22
TDP1-203ENST00000393454 RAB3CQ96E17 227 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms