RNA–Protein interactions for RNA: ENST00000390462.1

TRAV35-201, Transcript of T cell receptor alpha variable 35, humanhuman

BASIC

Gene TRAV35, Length 330 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV35-201ENST00000390462 SLC10A1Q14973 349 aa5.09□□□□□ -1.59
TRAV35-201ENST00000390462 SIX1Q15475 284 aaPredicted RBP5.09□□□□□ -1.59
TRAV35-201ENST00000390462 ACSM3Q53FZ2 586 aa5.09□□□□□ -1.59
TRAV35-201ENST00000390462 SYPL2Q5VXT5 272 aa5.09□□□□□ -1.59
TRAV35-201ENST00000390462 PCSK4Q6UW60 755 aa5.09□□□□□ -1.59
TRAV35-201ENST00000390462 RTL4Q6ZR62 310 aa5.09□□□□□ -1.59
TRAV35-201ENST00000390462 KRTAP19-1Q8IUB9 90 aa5.09□□□□□ -1.59
TRAV35-201ENST00000390462 ZNF680Q8NEM1 530 aa5.09□□□□□ -1.59
TRAV35-201ENST00000390462 OR4F15Q8NGB8 312 aa5.09□□□□□ -1.59
TRAV35-201ENST00000390462 OR52E2Q8NGJ4 325 aa5.09□□□□□ -1.59
TRAV35-201ENST00000390462 RNF138Q8WVD3 245 aa5.09□□□□□ -1.59
TRAV35-201ENST00000390462 C22orf15Q8WYQ4 148 aa5.09□□□□□ -1.59
TRAV35-201ENST00000390462 NEUROG1Q92886 237 aa5.09□□□□□ -1.59
TRAV35-201ENST00000390462 RPL36ALQ969Q0 106 aaKnown RBP5.09□□□□□ -1.59
TRAV35-201ENST00000390462 TMEM230Q96A57 120 aa5.09□□□□□ -1.59
TRAV35-201ENST00000390462 DGCR14Q96DF8 476 aaKnown RBP5.09□□□□□ -1.59
TRAV35-201ENST00000390462 NOL4LQ96MY1 436 aaPredicted RBP5.09□□□□□ -1.59
TRAV35-201ENST00000390462 STACQ99469 402 aa5.09□□□□□ -1.59
TRAV35-201ENST00000390462 HIST1H4GQ99525 98 aa5.09□□□□□ -1.59
TRAV35-201ENST00000390462 C1QTNF4Q9BXJ3 329 aa5.09□□□□□ -1.59
TRAV35-201ENST00000390462 C20orf85Q9H1P6 137 aa5.09□□□□□ -1.59
TRAV35-201ENST00000390462 PRORYQ9H606 182 aa5.09□□□□□ -1.59
TRAV35-201ENST00000390462 FBXO8Q9NRD0 319 aa5.09□□□□□ -1.59
TRAV35-201ENST00000390462 THAP10Q9P2Z0 257 aaPredicted RBP5.09□□□□□ -1.59
TRAV35-201ENST00000390462 MRPS18BQ9Y676 258 aaKnown RBP5.09□□□□□ -1.59
TRAV35-201ENST00000390462 MAPK8IP3Q9UPT6 1336 aa5.08□□□□□ -1.6
TRAV35-201ENST00000390462 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP5.08□□□□□ -1.6
TRAV35-201ENST00000390462 IGHV2OR16-5A0A0B4J2B6 119 aa5.08□□□□□ -1.6
TRAV35-201ENST00000390462 A0A1B0GUA9 196 aa5.08□□□□□ -1.6
TRAV35-201ENST00000390462 ISPDA4D126 451 aa5.08□□□□□ -1.6
TRAV35-201ENST00000390462 NTN3O00634 580 aaPredicted RBP5.08□□□□□ -1.6
TRAV35-201ENST00000390462 BIRC5O15392 142 aa5.08□□□□□ -1.6
TRAV35-201ENST00000390462 SEMA4FO95754 770 aa5.08□□□□□ -1.6
TRAV35-201ENST00000390462 AIFM1O95831 613 aa5.08□□□□□ -1.6
TRAV35-201ENST00000390462 TCRBP04435 133 aa5.08□□□□□ -1.6
TRAV35-201ENST00000390462 PGA4P0DJD7 388 aa5.08□□□□□ -1.6
TRAV35-201ENST00000390462 PGA3P0DJD8 388 aa5.08□□□□□ -1.6
TRAV35-201ENST00000390462 PGA5P0DJD9 388 aa5.08□□□□□ -1.6
TRAV35-201ENST00000390462 C8orf88P0DMB2 117 aa5.08□□□□□ -1.6
TRAV35-201ENST00000390462 GGT1P19440 569 aa5.08□□□□□ -1.6
TRAV35-201ENST00000390462 VDAC1P21796 283 aa5.08□□□□□ -1.6
TRAV35-201ENST00000390462 IGHV1-2P23083 117 aa5.08□□□□□ -1.6
TRAV35-201ENST00000390462 NTSP30990 170 aa5.08□□□□□ -1.6
TRAV35-201ENST00000390462 RPA3P35244 121 aaPredicted RBP5.08□□□□□ -1.6
TRAV35-201ENST00000390462 GLP1RP43220 463 aa5.08□□□□□ -1.6
TRAV35-201ENST00000390462 KLK7P49862 253 aa5.08□□□□□ -1.6
TRAV35-201ENST00000390462 RND2P52198 227 aa5.08□□□□□ -1.6
TRAV35-201ENST00000390462 AP2S1P53680 142 aaPredicted RBP5.08□□□□□ -1.6
TRAV35-201ENST00000390462 PPP1CBP62140 327 aa5.08□□□□□ -1.6
TRAV35-201ENST00000390462 COL10A1Q03692 680 aa5.08□□□□□ -1.6
TRAV35-201ENST00000390462 MXD1Q05195 221 aa5.08□□□□□ -1.6
TRAV35-201ENST00000390462 C9orf57Q5W0N0 161 aa5.08□□□□□ -1.6
TRAV35-201ENST00000390462 SPOPLQ6IQ16 392 aa5.08□□□□□ -1.6
TRAV35-201ENST00000390462 CRIP3Q6Q6R5 217 aa5.08□□□□□ -1.6
TRAV35-201ENST00000390462 GDPGP1Q6ZNW5 385 aa5.08□□□□□ -1.6
TRAV35-201ENST00000390462 DNM1P46Q6ZS02 220 aa5.08□□□□□ -1.6
TRAV35-201ENST00000390462 C17orf82Q86X59 251 aaPredicted RBP5.08□□□□□ -1.6
TRAV35-201ENST00000390462 RAB43Q86YS6 212 aa5.08□□□□□ -1.6
TRAV35-201ENST00000390462 C6orf223Q8N319 242 aa5.08□□□□□ -1.6
TRAV35-201ENST00000390462 OR51G1Q8NGK1 321 aa5.08□□□□□ -1.6
TRAV35-201ENST00000390462 OR6Q1Q8NGQ2 317 aa5.08□□□□□ -1.6
TRAV35-201ENST00000390462 TEX47Q8TBZ9 253 aa5.08□□□□□ -1.6
TRAV35-201ENST00000390462 SMIM19Q96E16 107 aa5.08□□□□□ -1.6
TRAV35-201ENST00000390462 TMEM56Q96MV1 263 aa5.08□□□□□ -1.6
TRAV35-201ENST00000390462 PRAP1Q96NZ9 151 aa5.08□□□□□ -1.6
TRAV35-201ENST00000390462 C20orf144Q9BQM9 153 aa5.08□□□□□ -1.6
TRAV35-201ENST00000390462 RIOK2Q9BVS4 552 aaKnown RBP5.08□□□□□ -1.6
TRAV35-201ENST00000390462 PLGRKTQ9HBL7 147 aa5.08□□□□□ -1.6
TRAV35-201ENST00000390462 IMPAD1Q9NX62 359 aa5.08□□□□□ -1.6
TRAV35-201ENST00000390462 NDE1Q9NXR1 346 aa5.08□□□□□ -1.6
TRAV35-201ENST00000390462 ST3GAL6Q9Y274 331 aa5.08□□□□□ -1.6
TRAV35-201ENST00000390462 COX11Q9Y6N1 276 aa5.08□□□□□ -1.6
TRAV35-201ENST00000390462 V9GYQ6 96 aa5.08□□□□□ -1.6
TRAV35-201ENST00000390462 REV3LO60673 3130 aa5.08□□□□□ -1.6
TRAV35-201ENST00000390462 GBF1Q92538 1859 aa5.08□□□□□ -1.6
TRAV35-201ENST00000390462 CACNA1GO43497 2377 aa5.08□□□□□ -1.6
TRAV35-201ENST00000390462 PLXNA1Q9UIW2 1896 aa5.07□□□□□ -1.6
TRAV35-201ENST00000390462 MED23Q9ULK4 1368 aa5.07□□□□□ -1.6
TRAV35-201ENST00000390462 IGHV4-30-2A0A087WSY4 118 aa5.07□□□□□ -1.6
TRAV35-201ENST00000390462 IGKV1D-13A0A0B4J2D9 117 aa5.07□□□□□ -1.6
TRAV35-201ENST00000390462 DHRS7CA6NNS2 312 aa5.07□□□□□ -1.6
TRAV35-201ENST00000390462 C21orf140B9A014 251 aa5.07□□□□□ -1.6
TRAV35-201ENST00000390462 F5H5T6 163 aa5.07□□□□□ -1.6
TRAV35-201ENST00000390462 H0YJX3 145 aa5.07□□□□□ -1.6
TRAV35-201ENST00000390462 FABP7O15540 132 aa5.07□□□□□ -1.6
TRAV35-201ENST00000390462 SYNGR1O43759 233 aa5.07□□□□□ -1.6
TRAV35-201ENST00000390462 SNAP91O60641 907 aa5.07□□□□□ -1.6
TRAV35-201ENST00000390462 CRYAAP02489 173 aa5.07□□□□□ -1.6
TRAV35-201ENST00000390462 IGKV1-13P0DP09 117 aa5.07□□□□□ -1.6
TRAV35-201ENST00000390462 IGLL1P15814 213 aa5.07□□□□□ -1.6
TRAV35-201ENST00000390462 UGT2B7P16662 529 aa5.07□□□□□ -1.6
TRAV35-201ENST00000390462 OR12D2P58182 307 aa5.07□□□□□ -1.6
TRAV35-201ENST00000390462 NUTF2P61970 127 aaKnown RBP5.07□□□□□ -1.6
TRAV35-201ENST00000390462 SNRPD1P62314 119 aaKnown RBP5.07□□□□□ -1.6
TRAV35-201ENST00000390462 AESQ08117 197 aa5.07□□□□□ -1.6
TRAV35-201ENST00000390462 FHL1Q13642 323 aa5.07□□□□□ -1.6
TRAV35-201ENST00000390462 TBC1D28Q2M2D7 210 aa5.07□□□□□ -1.6
TRAV35-201ENST00000390462 CCNJQ5T5M9 372 aa5.07□□□□□ -1.6
TRAV35-201ENST00000390462 FAM53AQ6NSI3 398 aaPredicted RBP5.07□□□□□ -1.6
TRAV35-201ENST00000390462 PWWP2BQ6NUJ5 590 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 99.9 ms