RNA–Protein interactions for RNA: ENST00000381323.7

FAM49A-201, Transcript of family with sequence similarity 49 member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM49A, Length 4,670 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49A-201ENST00000381323 PRSS48Q7RTY5 328 aa6.65□□□□□ -1.35
FAM49A-201ENST00000381323 MCUBQ9NWR8 336 aa6.65□□□□□ -1.35
FAM49A-201ENST00000381323 STUB1Q9UNE7 303 aa6.65□□□□□ -1.35
FAM49A-201ENST00000381323 OTOGQ6ZRI0 2925 aa6.65□□□□□ -1.35
FAM49A-201ENST00000381323 CHD3Q12873 2000 aaKnown RBP6.65□□□□□ -1.35
FAM49A-201ENST00000381323 TMPRSS2O15393 492 aa6.65□□□□□ -1.35
FAM49A-201ENST00000381323 PRODHO43272 600 aa6.65□□□□□ -1.35
FAM49A-201ENST00000381323 TSC22D2O75157 780 aa6.65□□□□□ -1.35
FAM49A-201ENST00000381323 HTR1AP08908 422 aa6.65□□□□□ -1.35
FAM49A-201ENST00000381323 ERP29P30040 261 aaKnown RBP6.65□□□□□ -1.35
FAM49A-201ENST00000381323 RPS27P42677 84 aaKnown RBP6.65□□□□□ -1.35
FAM49A-201ENST00000381323 CX3CR1P49238 355 aa6.65□□□□□ -1.35
FAM49A-201ENST00000381323 FOXL1Q12952 345 aa6.65□□□□□ -1.35
FAM49A-201ENST00000381323 CRMP1Q14194 572 aa6.65□□□□□ -1.35
FAM49A-201ENST00000381323 GINS1Q14691 196 aa6.65□□□□□ -1.35
FAM49A-201ENST00000381323 PRAMEF6Q5VXH4 476 aa6.65□□□□□ -1.35
FAM49A-201ENST00000381323 FIP1L1Q6UN15 594 aaKnown RBP6.65□□□□□ -1.35
FAM49A-201ENST00000381323 OR56B2PQ8NGI1 322 aa6.65□□□□□ -1.35
FAM49A-201ENST00000381323 SLC6A7Q99884 636 aa6.65□□□□□ -1.35
FAM49A-201ENST00000381323 IFT46Q9NQC8 304 aa6.65□□□□□ -1.35
FAM49A-201ENST00000381323 INPP5EQ9NRR6 644 aa6.65□□□□□ -1.35
FAM49A-201ENST00000381323 GLS2Q9UI32 602 aa6.65□□□□□ -1.35
FAM49A-201ENST00000381323 ATPIF1Q9UII2 106 aa6.65□□□□□ -1.35
FAM49A-201ENST00000381323 TCRBV3S1A0A5B6 114 aa6.64□□□□□ -1.35
FAM49A-201ENST00000381323 WBP4O75554 376 aaKnown RBP6.64□□□□□ -1.35
FAM49A-201ENST00000381323 CGB2Q6NT52 195 aa6.64□□□□□ -1.35
FAM49A-201ENST00000381323 ZNF620Q6ZNG0 422 aa6.64□□□□□ -1.35
FAM49A-201ENST00000381323 ERGIC1Q969X5 290 aa6.64□□□□□ -1.35
FAM49A-201ENST00000381323 DPAGT1Q9H3H5 408 aa6.64□□□□□ -1.35
FAM49A-201ENST00000381323 FAM118AQ9NWS6 357 aa6.64□□□□□ -1.35
FAM49A-201ENST00000381323 CCDC59Q9P031 241 aaKnown RBP6.64□□□□□ -1.35
FAM49A-201ENST00000381323 NUP50Q9UKX7 468 aa6.64□□□□□ -1.35
FAM49A-201ENST00000381323 CEACAM18A8MTB9 384 aa6.64□□□□□ -1.35
FAM49A-201ENST00000381323 VWC2LB2RUY7 222 aa6.64□□□□□ -1.35
FAM49A-201ENST00000381323 NDUFA2O43678 99 aa6.64□□□□□ -1.35
FAM49A-201ENST00000381323 MTRF1O75570 445 aaKnown RBP6.64□□□□□ -1.35
FAM49A-201ENST00000381323 IGHV2-5P01817 119 aa6.64□□□□□ -1.35
FAM49A-201ENST00000381323 ZNF182P17025 639 aaPredicted RBP6.64□□□□□ -1.35
FAM49A-201ENST00000381323 IKZF1Q13422 519 aa6.64□□□□□ -1.35
FAM49A-201ENST00000381323 RASSF6Q6ZTQ3 369 aa6.64□□□□□ -1.35
FAM49A-201ENST00000381323 OR52H1Q8NGJ2 320 aa6.64□□□□□ -1.35
FAM49A-201ENST00000381323 OR2AE1Q8NHA4 323 aa6.64□□□□□ -1.35
FAM49A-201ENST00000381323 NBPF19A0A087WUL8 3843 aa6.64□□□□□ -1.35
FAM49A-201ENST00000381323 TRAV40A0A0B4J280 105 aa6.64□□□□□ -1.35
FAM49A-201ENST00000381323 LYPD3O95274 346 aa6.64□□□□□ -1.35
FAM49A-201ENST00000381323 SLC2A2P11168 524 aaPredicted RBP6.64□□□□□ -1.35
FAM49A-201ENST00000381323 OSMP13725 252 aa6.64□□□□□ -1.35
FAM49A-201ENST00000381323 TMEM155Q4W5P6 130 aa6.64□□□□□ -1.35
FAM49A-201ENST00000381323 GLT8D1Q68CQ7 371 aa6.64□□□□□ -1.35
FAM49A-201ENST00000381323 EIF5AL1Q6IS14 154 aaKnown RBP6.64□□□□□ -1.35
FAM49A-201ENST00000381323 TMEM185AQ8NFB2 350 aa6.64□□□□□ -1.35
FAM49A-201ENST00000381323 TBC1D15Q8TC07 691 aa6.64□□□□□ -1.35
FAM49A-201ENST00000381323 LRRC29Q8WV35 223 aa6.64□□□□□ -1.35
FAM49A-201ENST00000381323 RNF170Q96K19 258 aa6.64□□□□□ -1.35
FAM49A-201ENST00000381323 KCNJ15Q99712 375 aa6.64□□□□□ -1.35
FAM49A-201ENST00000381323 CCDC32Q9BV29 185 aa6.64□□□□□ -1.35
FAM49A-201ENST00000381323 ACOT13Q9NPJ3 140 aa6.64□□□□□ -1.35
FAM49A-201ENST00000381323 SNTG1Q9NSN8 517 aa6.64□□□□□ -1.35
FAM49A-201ENST00000381323 ZNF224Q9NZL3 707 aa6.64□□□□□ -1.35
FAM49A-201ENST00000381323 VSX1Q9NZR4 365 aaPredicted RBP6.64□□□□□ -1.35
FAM49A-201ENST00000381323 PFDN2Q9UHV9 154 aa6.64□□□□□ -1.35
FAM49A-201ENST00000381323 LGALS8O00214 317 aa6.64□□□□□ -1.35
FAM49A-201ENST00000381323 FFAR1O14842 300 aa6.64□□□□□ -1.35
FAM49A-201ENST00000381323 RLN2P04090 185 aa6.64□□□□□ -1.35
FAM49A-201ENST00000381323 PLBD1Q6P4A8 553 aa6.64□□□□□ -1.35
FAM49A-201ENST00000381323 S100A16Q96FQ6 103 aaKnown RBP6.64□□□□□ -1.35
FAM49A-201ENST00000381323 FAM71F1Q96KD3 344 aaPredicted RBP6.64□□□□□ -1.35
FAM49A-201ENST00000381323 CNOT2Q9NZN8 540 aaKnown RBP6.64□□□□□ -1.35
FAM49A-201ENST00000381323 SLC7A11Q9UPY5 501 aa6.64□□□□□ -1.35
FAM49A-201ENST00000381323 UGT2A1Q9Y4X1 527 aa6.64□□□□□ -1.35
FAM49A-201ENST00000381323 MALRD1Q5VYJ5 2156 aa6.63□□□□□ -1.35
FAM49A-201ENST00000381323 GLCEO94923 617 aa6.63□□□□□ -1.35
FAM49A-201ENST00000381323 KRTAP24-1Q3LI83 254 aa6.63□□□□□ -1.35
FAM49A-201ENST00000381323 PDZD9Q8IXQ8 264 aa6.63□□□□□ -1.35
FAM49A-201ENST00000381323 GATAD2BQ8WXI9 593 aa6.63□□□□□ -1.35
FAM49A-201ENST00000381323 NABP1Q96AH0 204 aa6.63□□□□□ -1.35
FAM49A-201ENST00000381323 C12orf43Q96C57 262 aaKnown RBP6.63□□□□□ -1.35
FAM49A-201ENST00000381323 REEP6Q96HR9 211 aa6.63□□□□□ -1.35
FAM49A-201ENST00000381323 ABCD2Q9UBJ2 740 aa6.63□□□□□ -1.35
FAM49A-201ENST00000381323 RLN1P04808 185 aa6.63□□□□□ -1.35
FAM49A-201ENST00000381323 CD80P33681 288 aa6.63□□□□□ -1.35
FAM49A-201ENST00000381323 MAP2K3P46734 347 aa6.63□□□□□ -1.35
FAM49A-201ENST00000381323 RIDAP52758 137 aaKnown RBP6.63□□□□□ -1.35
FAM49A-201ENST00000381323 HIST3H3Q16695 136 aa6.63□□□□□ -1.35
FAM49A-201ENST00000381323 MICAQ29983 383 aa6.63□□□□□ -1.35
FAM49A-201ENST00000381323 IDNKQ5T6J7 187 aa6.63□□□□□ -1.35
FAM49A-201ENST00000381323 HACD4Q5VWC8 232 aa6.63□□□□□ -1.35
FAM49A-201ENST00000381323 HS3ST5Q8IZT8 346 aa6.63□□□□□ -1.35
FAM49A-201ENST00000381323 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.63□□□□□ -1.35
FAM49A-201ENST00000381323 RAB40AQ8WXH6 277 aa6.63□□□□□ -1.35
FAM49A-201ENST00000381323 SOX7Q9BT81 388 aa6.63□□□□□ -1.35
FAM49A-201ENST00000381323 CST11Q9H112 138 aa6.63□□□□□ -1.35
FAM49A-201ENST00000381323 NIPAL2Q9H841 368 aa6.63□□□□□ -1.35
FAM49A-201ENST00000381323 ABCB9Q9NP78 766 aa6.63□□□□□ -1.35
FAM49A-201ENST00000381323 COPZ2Q9P299 210 aa6.63□□□□□ -1.35
FAM49A-201ENST00000381323 NIPBLQ6KC79 2804 aaeCLIP6.63□□□□□ -1.35
FAM49A-201ENST00000381323 FBN2P35556 2912 aa6.63□□□□□ -1.35
FAM49A-201ENST00000381323 MEGF11A6BM72 1044 aa6.63□□□□□ -1.35
FAM49A-201ENST00000381323 FAM183AA6NL82 134 aa6.63□□□□□ -1.35
FAM49A-201ENST00000381323 GMDSO60547 372 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms