RNA–Protein interactions for RNA: ENST00000379996.7

CDKL5-202, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,449 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-202ENST00000379996 OR1J2Q8NGS2 313 aa6.74□□□□□ -1.33
CDKL5-202ENST00000379996 LRRC20Q8TCA0 184 aa6.74□□□□□ -1.33
CDKL5-202ENST00000379996 MRPS24Q96EL2 167 aaKnown RBP6.74□□□□□ -1.33
CDKL5-202ENST00000379996 C1orf159Q96HA4 380 aa6.74□□□□□ -1.33
CDKL5-202ENST00000379996 BOD1Q96IK1 185 aa6.74□□□□□ -1.33
CDKL5-202ENST00000379996 SLC25A21Q9BQT8 299 aaPredicted RBP6.74□□□□□ -1.33
CDKL5-202ENST00000379996 SLC6A15Q9H2J7 730 aa6.74□□□□□ -1.33
CDKL5-202ENST00000379996 DHDHQ9UQ10 334 aa6.74□□□□□ -1.33
CDKL5-202ENST00000379996 RPH3AQ9Y2J0 694 aaPredicted RBP6.74□□□□□ -1.33
CDKL5-202ENST00000379996 MEIS3P1A6NDR6 274 aa6.74□□□□□ -1.33
CDKL5-202ENST00000379996 A6NIZ1 184 aa6.74□□□□□ -1.33
CDKL5-202ENST00000379996 ZNF716A6NP11 495 aa6.74□□□□□ -1.33
CDKL5-202ENST00000379996 L7N2F9 121 aa6.74□□□□□ -1.33
CDKL5-202ENST00000379996 SMAD9O15198 467 aaKnown RBP6.74□□□□□ -1.33
CDKL5-202ENST00000379996 TRAPPC6AO75865 159 aa6.74□□□□□ -1.33
CDKL5-202ENST00000379996 RLN2P04090 185 aa6.74□□□□□ -1.33
CDKL5-202ENST00000379996 GTF2F2P13984 249 aa6.74□□□□□ -1.33
CDKL5-202ENST00000379996 RAP1BP61224 184 aa6.74□□□□□ -1.33
CDKL5-202ENST00000379996 RAP1AP62834 184 aa6.74□□□□□ -1.33
CDKL5-202ENST00000379996 EIF2S3LQ2VIR3 472 aaKnown RBP6.74□□□□□ -1.33
CDKL5-202ENST00000379996 TMEM176BQ3YBM2 270 aaPredicted RBP6.74□□□□□ -1.33
CDKL5-202ENST00000379996 MOB3CQ70IA8 216 aa6.74□□□□□ -1.33
CDKL5-202ENST00000379996 C10orf53Q8N6V4 93 aa6.74□□□□□ -1.33
CDKL5-202ENST00000379996 NKAIN3Q8N8D7 197 aa6.74□□□□□ -1.33
CDKL5-202ENST00000379996 OR52H1Q8NGJ2 320 aa6.74□□□□□ -1.33
CDKL5-202ENST00000379996 LHFPL5Q8TAF8 219 aa6.74□□□□□ -1.33
CDKL5-202ENST00000379996 SRXN1Q9BYN0 137 aa6.74□□□□□ -1.33
CDKL5-202ENST00000379996 CNTD2Q9H8S5 307 aa6.74□□□□□ -1.33
CDKL5-202ENST00000379996 OR52A1Q9UKL2 312 aa6.74□□□□□ -1.33
CDKL5-202ENST00000379996 EMC9Q9Y3B6 208 aa6.74□□□□□ -1.33
CDKL5-202ENST00000379996 FREM2Q5SZK8 3169 aa6.74□□□□□ -1.33
CDKL5-202ENST00000379996 TRBV6-7A0A0A0MS04 114 aa6.73□□□□□ -1.33
CDKL5-202ENST00000379996 SULT2B1O00204 365 aa6.73□□□□□ -1.33
CDKL5-202ENST00000379996 SPARCP09486 303 aa6.73□□□□□ -1.33
CDKL5-202ENST00000379996 FAM87AP0C7U9 286 aa6.73□□□□□ -1.33
CDKL5-202ENST00000379996 HSD11B1P28845 292 aa6.73□□□□□ -1.33
CDKL5-202ENST00000379996 RIDAP52758 137 aaKnown RBP6.73□□□□□ -1.33
CDKL5-202ENST00000379996 DHRS2Q13268 280 aa6.73□□□□□ -1.33
CDKL5-202ENST00000379996 POMZP3Q6PJE2 187 aa6.73□□□□□ -1.33
CDKL5-202ENST00000379996 GSG1LQ6UXU4 331 aa6.73□□□□□ -1.33
CDKL5-202ENST00000379996 CHMP1BQ7LBR1 199 aa6.73□□□□□ -1.33
CDKL5-202ENST00000379996 STPG2Q8N412 459 aa6.73□□□□□ -1.33
CDKL5-202ENST00000379996 KCNRGQ8N5I3 272 aa6.73□□□□□ -1.33
CDKL5-202ENST00000379996 OR6X1Q8NH79 312 aa6.73□□□□□ -1.33
CDKL5-202ENST00000379996 OR10D3Q8NH80 312 aa6.73□□□□□ -1.33
CDKL5-202ENST00000379996 TSEN15Q8WW01 171 aaKnown RBP6.73□□□□□ -1.33
CDKL5-202ENST00000379996 INTS12Q96CB8 462 aaKnown RBP6.73□□□□□ -1.33
CDKL5-202ENST00000379996 ADAT3Q96EY9 351 aaPredicted RBP6.73□□□□□ -1.33
CDKL5-202ENST00000379996 OR5B2Q96R09 309 aa6.73□□□□□ -1.33
CDKL5-202ENST00000379996 RASL12Q9NYN1 266 aa6.73□□□□□ -1.33
CDKL5-202ENST00000379996 KCNK7Q9Y2U2 307 aa6.73□□□□□ -1.33
CDKL5-202ENST00000379996 H3BSH0 61 aa6.73□□□□□ -1.33
CDKL5-202ENST00000379996 WDR1O75083 606 aa6.73□□□□□ -1.33
CDKL5-202ENST00000379996 CRHP06850 196 aa6.73□□□□□ -1.33
CDKL5-202ENST00000379996 LYL1P12980 280 aa6.73□□□□□ -1.33
CDKL5-202ENST00000379996 CRABP1P29762 137 aa6.73□□□□□ -1.33
CDKL5-202ENST00000379996 GSK3AP49840 483 aa6.73□□□□□ -1.33
CDKL5-202ENST00000379996 CARD18P57730 90 aa6.73□□□□□ -1.33
CDKL5-202ENST00000379996 GLO1Q04760 184 aa6.73□□□□□ -1.33
CDKL5-202ENST00000379996 KIR3DS1Q14943 382 aa6.73□□□□□ -1.33
CDKL5-202ENST00000379996 ZMYND11Q15326 602 aa6.73□□□□□ -1.33
CDKL5-202ENST00000379996 OR7A5Q15622 319 aa6.73□□□□□ -1.33
CDKL5-202ENST00000379996 KCNMB1Q16558 191 aa6.73□□□□□ -1.33
CDKL5-202ENST00000379996 OR5AS1Q8N127 324 aa6.73□□□□□ -1.33
CDKL5-202ENST00000379996 GPR160Q9UJ42 338 aa6.73□□□□□ -1.33
CDKL5-202ENST00000379996 LHFPL6Q9Y693 200 aa6.73□□□□□ -1.33
CDKL5-202ENST00000379996 TMEM82A0PJX8 343 aa6.73□□□□□ -1.33
CDKL5-202ENST00000379996 H3BML4 177 aa6.73□□□□□ -1.33
CDKL5-202ENST00000379996 XKRYO14609 159 aa6.73□□□□□ -1.33
CDKL5-202ENST00000379996 TNFSF11O14788 317 aa6.73□□□□□ -1.33
CDKL5-202ENST00000379996 ARPC5O15511 151 aa6.73□□□□□ -1.33
CDKL5-202ENST00000379996 TRAF3IP2O43734 574 aaPredicted RBP6.73□□□□□ -1.33
CDKL5-202ENST00000379996 GMFGO60234 142 aa6.73□□□□□ -1.33
CDKL5-202ENST00000379996 SS18L1O75177 396 aaPredicted RBP6.73□□□□□ -1.33
CDKL5-202ENST00000379996 RP2O75695 350 aa6.73□□□□□ -1.33
CDKL5-202ENST00000379996 UBCP0CG48 685 aaKnown RBP6.73□□□□□ -1.33
CDKL5-202ENST00000379996 PGA4P0DJD7 388 aa6.73□□□□□ -1.33
CDKL5-202ENST00000379996 PGA3P0DJD8 388 aa6.73□□□□□ -1.33
CDKL5-202ENST00000379996 VSIG8P0DPA2 414 aa6.73□□□□□ -1.33
CDKL5-202ENST00000379996 PMP22Q01453 160 aa6.73□□□□□ -1.33
CDKL5-202ENST00000379996 GK2Q14410 553 aaPredicted RBP6.73□□□□□ -1.33
CDKL5-202ENST00000379996 SLC22A6Q4U2R8 563 aa6.73□□□□□ -1.33
CDKL5-202ENST00000379996 KCTD18Q6PI47 426 aaPredicted RBP6.73□□□□□ -1.33
CDKL5-202ENST00000379996 CFAP77Q6ZQR2 320 aa6.73□□□□□ -1.33
CDKL5-202ENST00000379996 FOXL2NBQ6ZUU3 175 aa6.73□□□□□ -1.33
CDKL5-202ENST00000379996 RHOUQ7L0Q8 258 aa6.73□□□□□ -1.33
CDKL5-202ENST00000379996 DCXRQ7Z4W1 244 aa6.73□□□□□ -1.33
CDKL5-202ENST00000379996 ZDHHC22Q8N966 263 aa6.73□□□□□ -1.33
CDKL5-202ENST00000379996 FAM57AQ8TBR7 257 aa6.73□□□□□ -1.33
CDKL5-202ENST00000379996 MITD1Q8WV92 249 aa6.73□□□□□ -1.33
CDKL5-202ENST00000379996 TMEM54Q969K7 222 aa6.73□□□□□ -1.33
CDKL5-202ENST00000379996 DNAJA3Q96EY1 480 aa6.73□□□□□ -1.33
CDKL5-202ENST00000379996 SLC25A44Q96H78 314 aaPredicted RBP6.73□□□□□ -1.33
CDKL5-202ENST00000379996 UQCC2Q9BRT2 126 aa6.73□□□□□ -1.33
CDKL5-202ENST00000379996 LINC00470Q9BZP3 86 aa6.73□□□□□ -1.33
CDKL5-202ENST00000379996 ATG5Q9H1Y0 275 aa6.73□□□□□ -1.33
CDKL5-202ENST00000379996 MBD3L4A6NDZ8 208 aaPredicted RBP6.72□□□□□ -1.33
CDKL5-202ENST00000379996 MBD3L3A6NE82 208 aaPredicted RBP6.72□□□□□ -1.33
CDKL5-202ENST00000379996 MBD3L5A6NJ08 208 aaPredicted RBP6.72□□□□□ -1.33
CDKL5-202ENST00000379996 ADARB2-AS1A8MUL3 147 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms