RNA–Protein interactions for RNA: ENST00000378725.3

SSU72-203, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 619 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-203ENST00000378725 PLEKHA1Q9HB21 404 aa15.78■□□□□ 0.12
SSU72-203ENST00000378725 GPR173Q9NS66 373 aa15.78■□□□□ 0.12
SSU72-203ENST00000378725 WIPI2Q9Y4P8 454 aa15.78■□□□□ 0.12
SSU72-203ENST00000378725 NPTNQ9Y639 398 aa15.78■□□□□ 0.12
SSU72-203ENST00000378725 VPS13CQ709C8 3753 aa15.78■□□□□ 0.12
SSU72-203ENST00000378725 OR5B21A6NL26 309 aa15.77■□□□□ 0.12
SSU72-203ENST00000378725 LRRC30A6NM36 301 aa15.77■□□□□ 0.12
SSU72-203ENST00000378725 SERPINA3P01011 423 aa15.77■□□□□ 0.12
SSU72-203ENST00000378725 CFHR2P36980 270 aa15.77■□□□□ 0.12
SSU72-203ENST00000378725 PLCXD3Q63HM9 321 aa15.77■□□□□ 0.12
SSU72-203ENST00000378725 UTS2BQ765I0 119 aa15.77■□□□□ 0.12
SSU72-203ENST00000378725 OR13C3Q8NGS6 347 aa15.77■□□□□ 0.12
SSU72-203ENST00000378725 OR11L1Q8NGX0 322 aa15.77■□□□□ 0.12
SSU72-203ENST00000378725 HPS1Q92902 700 aa15.77■□□□□ 0.12
SSU72-203ENST00000378725 PGLYRP3Q96LB9 341 aa15.77■□□□□ 0.12
SSU72-203ENST00000378725 TECTBQ96PL2 329 aa15.77■□□□□ 0.12
SSU72-203ENST00000378725 CCDC90BQ9GZT6 254 aa15.77■□□□□ 0.12
SSU72-203ENST00000378725 OR51I2Q9H344 312 aa15.77■□□□□ 0.12
SSU72-203ENST00000378725 C1orf123Q9NWV4 160 aa15.77■□□□□ 0.12
SSU72-203ENST00000378725 ZNF281Q9Y2X9 895 aa15.77■□□□□ 0.12
SSU72-203ENST00000378725 ZNF732B4DXR9 585 aa15.76■□□□□ 0.11
SSU72-203ENST00000378725 WNT9BO14905 357 aa15.76■□□□□ 0.11
SSU72-203ENST00000378725 GATBO75879 557 aaKnown RBP15.76■□□□□ 0.11
SSU72-203ENST00000378725 CYB5R3P00387 301 aaPredicted RBP15.76■□□□□ 0.11
SSU72-203ENST00000378725 LHBP01229 141 aa15.76■□□□□ 0.11
SSU72-203ENST00000378725 IGHV2-70P01814 119 aa15.76■□□□□ 0.11
SSU72-203ENST00000378725 INHBBP09529 407 aa15.76■□□□□ 0.11
SSU72-203ENST00000378725 EEF1B2P24534 225 aaKnown RBP15.76■□□□□ 0.11
SSU72-203ENST00000378725 GPM6AP51674 278 aa15.76■□□□□ 0.11
SSU72-203ENST00000378725 CHN2P52757 468 aa15.76■□□□□ 0.11
SSU72-203ENST00000378725 DMRTC1Q5HYR2 192 aa15.76■□□□□ 0.11
SSU72-203ENST00000378725 AVPI1Q5T686 147 aa15.76■□□□□ 0.11
SSU72-203ENST00000378725 ZNF826PQ6ZT77 177 aa15.76■□□□□ 0.11
SSU72-203ENST00000378725 LRRC28Q86X40 367 aaPredicted RBP15.76■□□□□ 0.11
SSU72-203ENST00000378725 C1orf87Q8N0U7 546 aa15.76■□□□□ 0.11
SSU72-203ENST00000378725 PARP16Q8N5Y8 322 aa15.76■□□□□ 0.11
SSU72-203ENST00000378725 ZFP41Q8N8Y5 198 aa15.76■□□□□ 0.11
SSU72-203ENST00000378725 MAPK1IP1LQ8NDC0 245 aa15.76■□□□□ 0.11
SSU72-203ENST00000378725 GPR148Q8TDV2 347 aa15.76■□□□□ 0.11
SSU72-203ENST00000378725 ISYNA1Q9NPH2 558 aa15.76■□□□□ 0.11
SSU72-203ENST00000378725 RNF7Q9UBF6 113 aa15.76■□□□□ 0.11
SSU72-203ENST00000378725 ITPR3Q14573 2671 aa15.75■□□□□ 0.11
SSU72-203ENST00000378725 PQLC2LA1A4F0 135 aa15.75■□□□□ 0.11
SSU72-203ENST00000378725 LRP5LA4QPB2 252 aa15.75■□□□□ 0.11
SSU72-203ENST00000378725 SMAD7O15105 426 aaKnown RBP15.75■□□□□ 0.11
SSU72-203ENST00000378725 IRF2P14316 349 aa15.75■□□□□ 0.11
SSU72-203ENST00000378725 ZNF20P17024 532 aa15.75■□□□□ 0.11
SSU72-203ENST00000378725 RPS11P62280 158 aaKnown RBP eCLIP15.75■□□□□ 0.11
SSU72-203ENST00000378725 BTG1P62324 171 aa15.75■□□□□ 0.11
SSU72-203ENST00000378725 YIF1BQ5BJH7 314 aa15.75■□□□□ 0.11
SSU72-203ENST00000378725 WDR82Q6UXN9 313 aa15.75■□□□□ 0.11
SSU72-203ENST00000378725 KCTD8Q6ZWB6 473 aa15.75■□□□□ 0.11
SSU72-203ENST00000378725 SCCPDHQ8NBX0 429 aa15.75■□□□□ 0.11
SSU72-203ENST00000378725 RPL3LQ92901 407 aaKnown RBP15.75■□□□□ 0.11
SSU72-203ENST00000378725 SLC7A11Q9UPY5 501 aa15.75■□□□□ 0.11
SSU72-203ENST00000378725 DHDHQ9UQ10 334 aa15.75■□□□□ 0.11
SSU72-203ENST00000378725 TANC2Q9HCD6 1990 aa15.75■□□□□ 0.11
SSU72-203ENST00000378725 IGKV1-9A0A0C4DH69 117 aa15.74■□□□□ 0.11
SSU72-203ENST00000378725 TRBV5-5A0A0J9YX44 114 aa15.74■□□□□ 0.11
SSU72-203ENST00000378725 A6NLC8 198 aa15.74■□□□□ 0.11
SSU72-203ENST00000378725 CDIPTO14735 213 aa15.74■□□□□ 0.11
SSU72-203ENST00000378725 ALX3O95076 343 aa15.74■□□□□ 0.11
SSU72-203ENST00000378725 ATF1P18846 271 aa15.74■□□□□ 0.11
SSU72-203ENST00000378725 CELP19835 753 aa15.74■□□□□ 0.11
SSU72-203ENST00000378725 MAP2K4P45985 399 aa15.74■□□□□ 0.11
SSU72-203ENST00000378725 GPR50Q13585 617 aa15.74■□□□□ 0.11
SSU72-203ENST00000378725 ZMYND11Q15326 602 aa15.74■□□□□ 0.11
SSU72-203ENST00000378725 MED22Q15528 200 aa15.74■□□□□ 0.11
SSU72-203ENST00000378725 TBCEQ15813 527 aaPredicted RBP15.74■□□□□ 0.11
SSU72-203ENST00000378725 TMEM155Q4W5P6 130 aa15.74■□□□□ 0.11
SSU72-203ENST00000378725 SERPINA12Q8IW75 414 aa15.74■□□□□ 0.11
SSU72-203ENST00000378725 GCSAMQ8N6F7 178 aa15.74■□□□□ 0.11
SSU72-203ENST00000378725 DNAAF1Q8NEP3 725 aa15.74■□□□□ 0.11
SSU72-203ENST00000378725 CLDND2Q8NHS1 167 aa15.74■□□□□ 0.11
SSU72-203ENST00000378725 TMEM165Q9HC07 324 aa15.74■□□□□ 0.11
SSU72-203ENST00000378725 DYSFO75923 2080 aa15.73■□□□□ 0.11
SSU72-203ENST00000378725 PPIAL4EA0A075B759 164 aa15.73■□□□□ 0.11
SSU72-203ENST00000378725 PPIAL4DF5H284 164 aa15.73■□□□□ 0.11
SSU72-203ENST00000378725 PPIAL4FP0DN26 164 aa15.73■□□□□ 0.11
SSU72-203ENST00000378725 FUT6P51993 359 aa15.73■□□□□ 0.11
SSU72-203ENST00000378725 LMO4P61968 165 aa15.73■□□□□ 0.11
SSU72-203ENST00000378725 CNN3Q15417 329 aaKnown RBP15.73■□□□□ 0.11
SSU72-203ENST00000378725 FAM201AQ5SY85 155 aa15.73■□□□□ 0.11
SSU72-203ENST00000378725 ZNF529Q6P280 563 aa15.73■□□□□ 0.11
SSU72-203ENST00000378725 ZNF573Q86YE8 665 aa15.73■□□□□ 0.11
SSU72-203ENST00000378725 OR5D14Q8NGL3 314 aa15.73■□□□□ 0.11
SSU72-203ENST00000378725 OR10Z1Q8NGY1 313 aa15.73■□□□□ 0.11
SSU72-203ENST00000378725 TSEN15Q8WW01 171 aaKnown RBP15.73■□□□□ 0.11
SSU72-203ENST00000378725 C1orf159Q96HA4 380 aa15.73■□□□□ 0.11
SSU72-203ENST00000378725 ZCCHC4Q9H5U6 513 aa15.73■□□□□ 0.11
SSU72-203ENST00000378725 METTL17Q9H7H0 456 aaPredicted RBP15.73■□□□□ 0.11
SSU72-203ENST00000378725 ACOT13Q9NPJ3 140 aa15.73■□□□□ 0.11
SSU72-203ENST00000378725 PPIAL4AQ9Y536 164 aa15.73■□□□□ 0.11
SSU72-203ENST00000378725 PNMA8CA0A1B0GUJ8 204 aa15.72■□□□□ 0.11
SSU72-203ENST00000378725 OCM2P0CE71 109 aa15.72■□□□□ 0.11
SSU72-203ENST00000378725 PRKACBP22694 351 aa15.72■□□□□ 0.11
SSU72-203ENST00000378725 MDH2P40926 338 aaKnown RBP15.72■□□□□ 0.11
SSU72-203ENST00000378725 EMX1Q04741 257 aaPredicted RBP15.72■□□□□ 0.11
SSU72-203ENST00000378725 TPBGQ13641 420 aa15.72■□□□□ 0.11
SSU72-203ENST00000378725 TMEM249Q2WGJ8 235 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms