RNA–Protein interactions for RNA: ENST00000378679.7

SHROOM1-203, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHROOM1, Length 4,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-203ENST00000378679 S100A11P31949 105 aa12.55□□□□□ -0.4
SHROOM1-203ENST00000378679 OR4C16Q8NGL9 310 aa12.55□□□□□ -0.4
SHROOM1-203ENST00000378679 OR1S1Q8NH92 325 aa12.55□□□□□ -0.4
SHROOM1-203ENST00000378679 MIXL1Q9H2W2 232 aa12.55□□□□□ -0.4
SHROOM1-203ENST00000378679 EDDM3BP56851 147 aa12.55□□□□□ -0.4
SHROOM1-203ENST00000378679 RAB5BP61020 215 aa12.55□□□□□ -0.4
SHROOM1-203ENST00000378679 ZP4Q12836 540 aa12.55□□□□□ -0.4
SHROOM1-203ENST00000378679 ZNF718Q3SXZ3 478 aa12.55□□□□□ -0.4
SHROOM1-203ENST00000378679 CD276Q5ZPR3 534 aa12.55□□□□□ -0.4
SHROOM1-203ENST00000378679 OR11L1Q8NGX0 322 aa12.55□□□□□ -0.4
SHROOM1-203ENST00000378679 RNF133Q8WVZ7 376 aa12.55□□□□□ -0.4
SHROOM1-203ENST00000378679 SPSB1Q96BD6 273 aa12.55□□□□□ -0.4
SHROOM1-203ENST00000378679 CMBLQ96DG6 245 aa12.55□□□□□ -0.4
SHROOM1-203ENST00000378679 AMELYQ99218 206 aa12.55□□□□□ -0.4
SHROOM1-203ENST00000378679 RGCCQ9H4X1 137 aa12.55□□□□□ -0.4
SHROOM1-203ENST00000378679 POLDIP2Q9Y2S7 368 aa12.55□□□□□ -0.4
SHROOM1-203ENST00000378679 KLF4O43474 513 aa12.55□□□□□ -0.4
SHROOM1-203ENST00000378679 GLSO94925 669 aaPredicted RBP12.55□□□□□ -0.4
SHROOM1-203ENST00000378679 MMP16P51512 607 aa12.55□□□□□ -0.4
SHROOM1-203ENST00000378679 FBXW12Q6X9E4 464 aa12.55□□□□□ -0.4
SHROOM1-203ENST00000378679 WFDC8Q8IUA0 241 aa12.55□□□□□ -0.4
SHROOM1-203ENST00000378679 TCTE3Q8IZS6 198 aa12.55□□□□□ -0.4
SHROOM1-203ENST00000378679 ZNF709Q8N972 641 aa12.55□□□□□ -0.4
SHROOM1-203ENST00000378679 OR4S1Q8NGB4 309 aa12.55□□□□□ -0.4
SHROOM1-203ENST00000378679 UBL7Q96S82 380 aaPredicted RBP12.55□□□□□ -0.4
SHROOM1-203ENST00000378679 RPS10P5Q9NQ39 176 aa12.55□□□□□ -0.4
SHROOM1-203ENST00000378679 FOXJ2Q9P0K8 574 aa12.55□□□□□ -0.4
SHROOM1-203ENST00000378679 ST6GALNAC2Q9UJ37 374 aa12.55□□□□□ -0.4
SHROOM1-203ENST00000378679 PCNX2A6NKB5 2137 aa12.54□□□□□ -0.4
SHROOM1-203ENST00000378679 TNFSF12O43508 249 aa12.54□□□□□ -0.4
SHROOM1-203ENST00000378679 DNPH1O43598 174 aa12.54□□□□□ -0.4
SHROOM1-203ENST00000378679 ATG12O94817 140 aa12.54□□□□□ -0.4
SHROOM1-203ENST00000378679 IFNA5P01569 189 aa12.54□□□□□ -0.4
SHROOM1-203ENST00000378679 S100A2P29034 98 aa12.54□□□□□ -0.4
SHROOM1-203ENST00000378679 HRH1P35367 487 aa12.54□□□□□ -0.4
SHROOM1-203ENST00000378679 SFRP5Q5T4F7 317 aa12.54□□□□□ -0.4
SHROOM1-203ENST00000378679 TMEM251Q8N6I4 163 aa12.54□□□□□ -0.4
SHROOM1-203ENST00000378679 PTDSS2Q9BVG9 487 aa12.54□□□□□ -0.4
SHROOM1-203ENST00000378679 POFUT1Q9H488 388 aa12.54□□□□□ -0.4
SHROOM1-203ENST00000378679 M0R1B8 84 aa12.54□□□□□ -0.4
SHROOM1-203ENST00000378679 GABRA4P48169 554 aa12.54□□□□□ -0.4
SHROOM1-203ENST00000378679 FUT6P51993 359 aa12.54□□□□□ -0.4
SHROOM1-203ENST00000378679 ATP1A1-AS1Q5TC04 95 aa12.54□□□□□ -0.4
SHROOM1-203ENST00000378679 OR2T2Q6IF00 324 aa12.54□□□□□ -0.4
SHROOM1-203ENST00000378679 ASB5Q8WWX0 329 aa12.54□□□□□ -0.4
SHROOM1-203ENST00000378679 TRAF4Q9BUZ4 470 aaPredicted RBP12.54□□□□□ -0.4
SHROOM1-203ENST00000378679 TTTY12Q9BZ98 90 aa12.54□□□□□ -0.4
SHROOM1-203ENST00000378679 A0A0B4J2A0 478 aa12.54□□□□□ -0.4
SHROOM1-203ENST00000378679 ACTL6AO96019 429 aa12.54□□□□□ -0.4
SHROOM1-203ENST00000378679 BMP5P22003 454 aa12.54□□□□□ -0.4
SHROOM1-203ENST00000378679 ARHGEF39Q8N4T4 335 aa12.54□□□□□ -0.4
SHROOM1-203ENST00000378679 CNTD2Q9H8S5 307 aa12.54□□□□□ -0.4
SHROOM1-203ENST00000378679 SHPKQ9UHJ6 478 aa12.54□□□□□ -0.4
SHROOM1-203ENST00000378679 CD300LBA8K4G0 201 aa12.53□□□□□ -0.4
SHROOM1-203ENST00000378679 KRBOX1C9JBD0 128 aa12.53□□□□□ -0.4
SHROOM1-203ENST00000378679 MS4A18H0YCH9 400 aa12.53□□□□□ -0.4
SHROOM1-203ENST00000378679 SNRNP70P08621 437 aaKnown RBP12.53□□□□□ -0.4
SHROOM1-203ENST00000378679 GSTP1P09211 210 aaKnown RBP12.53□□□□□ -0.4
SHROOM1-203ENST00000378679 PTGFRP43088 359 aa12.53□□□□□ -0.4
SHROOM1-203ENST00000378679 GGTLC2Q14390 218 aa12.53□□□□□ -0.4
SHROOM1-203ENST00000378679 PDCD1Q15116 288 aa12.53□□□□□ -0.4
SHROOM1-203ENST00000378679 MS4A18Q3C1V0 323 aa12.53□□□□□ -0.4
SHROOM1-203ENST00000378679 Q5BKY6 102 aa12.53□□□□□ -0.4
SHROOM1-203ENST00000378679 AADACL3Q5VUY0 350 aa12.53□□□□□ -0.4
SHROOM1-203ENST00000378679 CDCP2Q5VXM1 449 aa12.53□□□□□ -0.4
SHROOM1-203ENST00000378679 DEFB108BQ8NET1 73 aa12.53□□□□□ -0.4
SHROOM1-203ENST00000378679 UQCC2Q9BRT2 126 aa12.53□□□□□ -0.4
SHROOM1-203ENST00000378679 SLC26A1Q9H2B4 701 aa12.53□□□□□ -0.4
SHROOM1-203ENST00000378679 KCNK15Q9H427 330 aa12.53□□□□□ -0.4
SHROOM1-203ENST00000378679 NECAP2Q9NVZ3 263 aa12.53□□□□□ -0.4
SHROOM1-203ENST00000378679 IGLV3-12A0A075B6K2 115 aa12.53□□□□□ -0.4
SHROOM1-203ENST00000378679 SULT1C2O00338 296 aa12.53□□□□□ -0.4
SHROOM1-203ENST00000378679 UPK3AO75631 287 aa12.53□□□□□ -0.4
SHROOM1-203ENST00000378679 ZNF17P17021 662 aa12.53□□□□□ -0.4
SHROOM1-203ENST00000378679 LINC00303Q3SY05 128 aa12.53□□□□□ -0.4
SHROOM1-203ENST00000378679 TSPO2Q5TGU0 170 aa12.53□□□□□ -0.4
SHROOM1-203ENST00000378679 MRPL14Q6P1L8 145 aaKnown RBP12.53□□□□□ -0.4
SHROOM1-203ENST00000378679 SLC22A25Q6T423 547 aa12.53□□□□□ -0.4
SHROOM1-203ENST00000378679 TFAP2EQ6VUC0 442 aa12.53□□□□□ -0.4
SHROOM1-203ENST00000378679 RAB9BQ9NP90 201 aa12.53□□□□□ -0.4
SHROOM1-203ENST00000378679 PLXNA4Q9HCM2 1894 aa12.53□□□□□ -0.4
SHROOM1-203ENST00000378679 KIR2DS1A0A191URI9 304 aa12.53□□□□□ -0.4
SHROOM1-203ENST00000378679 OR8U9P0C7N5 309 aa12.53□□□□□ -0.4
SHROOM1-203ENST00000378679 KIR2DS4P43632 304 aa12.53□□□□□ -0.4
SHROOM1-203ENST00000378679 KIR2DS1Q14954 304 aa12.53□□□□□ -0.4
SHROOM1-203ENST00000378679 CATSPERDQ86XM0 798 aa12.53□□□□□ -0.4
SHROOM1-203ENST00000378679 OSR2Q8N2R0 312 aa12.53□□□□□ -0.4
SHROOM1-203ENST00000378679 CMTM3Q96MX0 182 aa12.53□□□□□ -0.4
SHROOM1-203ENST00000378679 C12orf57Q99622 126 aa12.53□□□□□ -0.4
SHROOM1-203ENST00000378679 HES7Q9BYE0 225 aa12.53□□□□□ -0.4
SHROOM1-203ENST00000378679 TMEM272A0A1B0GTI8 110 aa12.53□□□□□ -0.4
SHROOM1-203ENST00000378679 LANCL1O43813 399 aa12.53□□□□□ -0.4
SHROOM1-203ENST00000378679 CTAG2O75638 210 aa12.53□□□□□ -0.4
SHROOM1-203ENST00000378679 GPM6AP51674 278 aa12.53□□□□□ -0.4
SHROOM1-203ENST00000378679 MRPS34P82930 218 aaKnown RBP12.53□□□□□ -0.4
SHROOM1-203ENST00000378679 LINC00052Q96N35 136 aa12.53□□□□□ -0.4
SHROOM1-203ENST00000378679 ZNF2Q9BSG1 426 aaPredicted RBP12.53□□□□□ -0.4
SHROOM1-203ENST00000378679 BIN3Q9NQY0 253 aa12.53□□□□□ -0.4
SHROOM1-203ENST00000378679 CDH23Q9H251 3354 aa12.52□□□□□ -0.4
SHROOM1-203ENST00000378679 GALR2O43603 387 aaPredicted RBP12.52□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms