RNA–Protein interactions for RNA: ENST00000378161.5

NPHP4-202, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,370 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-202ENST00000378161 TCTN3Q6NUS6 607 aa10.57□□□□□ -0.72
NPHP4-202ENST00000378161 TAS1R1Q7RTX1 841 aa10.57□□□□□ -0.72
NPHP4-202ENST00000378161 ADAMTS18Q8TE60 1221 aa10.57□□□□□ -0.72
NPHP4-202ENST00000378161 TRA2BP62995 288 aaKnown RBP10.57□□□□□ -0.72
NPHP4-202ENST00000378161 SLC25A30Q5SVS4 291 aa10.57□□□□□ -0.72
NPHP4-202ENST00000378161 OR9A4Q8NGU2 314 aa10.57□□□□□ -0.72
NPHP4-202ENST00000378161 SLC38A5Q8WUX1 472 aa10.57□□□□□ -0.72
NPHP4-202ENST00000378161 SMIM19Q96E16 107 aa10.57□□□□□ -0.72
NPHP4-202ENST00000378161 FAM71F1Q96KD3 344 aaPredicted RBP10.57□□□□□ -0.72
NPHP4-202ENST00000378161 OR52D1Q9H346 318 aa10.57□□□□□ -0.72
NPHP4-202ENST00000378161 BLACEA4D250 179 aa10.56□□□□□ -0.72
NPHP4-202ENST00000378161 NTF3P20783 257 aa10.56□□□□□ -0.72
NPHP4-202ENST00000378161 CCKBRP32239 447 aa10.56□□□□□ -0.72
NPHP4-202ENST00000378161 EFNA3P52797 238 aa10.56□□□□□ -0.72
NPHP4-202ENST00000378161 PFN3P60673 137 aa10.56□□□□□ -0.72
NPHP4-202ENST00000378161 COL10A1Q03692 680 aa10.56□□□□□ -0.72
NPHP4-202ENST00000378161 EXT1Q16394 746 aa10.56□□□□□ -0.72
NPHP4-202ENST00000378161 CST9Q5W186 159 aa10.56□□□□□ -0.72
NPHP4-202ENST00000378161 KLHDC8AQ8IYD2 350 aa10.56□□□□□ -0.72
NPHP4-202ENST00000378161 LRRC25Q8N386 305 aaPredicted RBP10.56□□□□□ -0.72
NPHP4-202ENST00000378161 MRGPRX1Q96LB2 322 aa10.56□□□□□ -0.72
NPHP4-202ENST00000378161 ELL3Q9HB65 397 aaPredicted RBP10.56□□□□□ -0.72
NPHP4-202ENST00000378161 Q9N2J8 555 aa10.56□□□□□ -0.72
NPHP4-202ENST00000378161 MRPS18AQ9NVS2 196 aaKnown RBP10.56□□□□□ -0.72
NPHP4-202ENST00000378161 COPS7AQ9UBW8 275 aa10.56□□□□□ -0.72
NPHP4-202ENST00000378161 ZNF107Q9UII5 783 aaPredicted RBP10.56□□□□□ -0.72
NPHP4-202ENST00000378161 HS3ST2Q9Y278 367 aa10.56□□□□□ -0.72
NPHP4-202ENST00000378161 HSD17B6O14756 317 aa10.56□□□□□ -0.72
NPHP4-202ENST00000378161 HMGN2P05204 90 aaKnown RBP10.56□□□□□ -0.72
NPHP4-202ENST00000378161 GYPBP06028 91 aa10.56□□□□□ -0.72
NPHP4-202ENST00000378161 ELLP55199 621 aaPredicted RBP10.56□□□□□ -0.72
NPHP4-202ENST00000378161 NKAIN3Q8N8D7 197 aa10.56□□□□□ -0.72
NPHP4-202ENST00000378161 ZDHHC22Q8N966 263 aa10.56□□□□□ -0.72
NPHP4-202ENST00000378161 ZNF296Q8WUU4 475 aaPredicted RBP10.56□□□□□ -0.72
NPHP4-202ENST00000378161 FAM3DQ96BQ1 224 aa10.56□□□□□ -0.72
NPHP4-202ENST00000378161 LOXL4Q96JB6 756 aa10.56□□□□□ -0.72
NPHP4-202ENST00000378161 GPER1Q99527 375 aa10.56□□□□□ -0.72
NPHP4-202ENST00000378161 PKIBQ9C010 78 aa10.56□□□□□ -0.72
NPHP4-202ENST00000378161 ZMAT3Q9HA38 289 aaKnown RBP10.56□□□□□ -0.72
NPHP4-202ENST00000378161 CCL27Q9Y4X3 112 aa10.56□□□□□ -0.72
NPHP4-202ENST00000378161 CSTBP04080 98 aaKnown RBP10.56□□□□□ -0.72
NPHP4-202ENST00000378161 HPNP05981 417 aa10.56□□□□□ -0.72
NPHP4-202ENST00000378161 CXCL1P09341 107 aa10.56□□□□□ -0.72
NPHP4-202ENST00000378161 SEC11BP0C7V7 166 aa10.56□□□□□ -0.72
NPHP4-202ENST00000378161 ASCL1P50553 236 aa10.56□□□□□ -0.72
NPHP4-202ENST00000378161 FAM3AP98173 230 aa10.56□□□□□ -0.72
NPHP4-202ENST00000378161 ZNF74Q16587 644 aa10.56□□□□□ -0.72
NPHP4-202ENST00000378161 AADACL3Q5VUY0 350 aa10.56□□□□□ -0.72
NPHP4-202ENST00000378161 OR8I2Q8N0Y5 310 aa10.56□□□□□ -0.72
NPHP4-202ENST00000378161 ERGIC1Q969X5 290 aa10.56□□□□□ -0.72
NPHP4-202ENST00000378161 OR10A5Q9H207 317 aa10.56□□□□□ -0.72
NPHP4-202ENST00000378161 ADGRL4Q9HBW9 690 aa10.56□□□□□ -0.72
NPHP4-202ENST00000378161 EHFQ9NZC4 300 aa10.56□□□□□ -0.72
NPHP4-202ENST00000378161 COX11Q9Y6N1 276 aa10.56□□□□□ -0.72
NPHP4-202ENST00000378161 ZNF831Q5JPB2 1677 aa10.56□□□□□ -0.72
NPHP4-202ENST00000378161 E5RGE8 158 aa10.56□□□□□ -0.72
NPHP4-202ENST00000378161 ANGPTL7O43827 346 aa10.56□□□□□ -0.72
NPHP4-202ENST00000378161 KLK2P20151 261 aa10.56□□□□□ -0.72
NPHP4-202ENST00000378161 GRPRP30550 384 aa10.56□□□□□ -0.72
NPHP4-202ENST00000378161 SLC6A12P48065 614 aa10.56□□□□□ -0.72
NPHP4-202ENST00000378161 TMEM33P57088 247 aa10.56□□□□□ -0.72
NPHP4-202ENST00000378161 CDK5R1Q15078 307 aa10.56□□□□□ -0.72
NPHP4-202ENST00000378161 ALG10Q5BKT4 473 aa10.56□□□□□ -0.72
NPHP4-202ENST00000378161 ALG10BQ5I7T1 473 aa10.56□□□□□ -0.72
NPHP4-202ENST00000378161 BTNL8Q6UX41 500 aa10.56□□□□□ -0.72
NPHP4-202ENST00000378161 ZNF550Q7Z398 422 aa10.56□□□□□ -0.72
NPHP4-202ENST00000378161 STXBP6Q8NFX7 210 aa10.56□□□□□ -0.72
NPHP4-202ENST00000378161 OR4X1Q8NH49 305 aa10.56□□□□□ -0.72
NPHP4-202ENST00000378161 SLC6A18Q96N87 628 aa10.56□□□□□ -0.72
NPHP4-202ENST00000378161 ATP6V0BQ99437 205 aa10.56□□□□□ -0.72
NPHP4-202ENST00000378161 ATP5SQ99766 215 aa10.56□□□□□ -0.72
NPHP4-202ENST00000378161 ST6GALNAC1Q9NSC7 600 aaPredicted RBP10.56□□□□□ -0.72
NPHP4-202ENST00000378161 NSG2Q9Y328 171 aa10.56□□□□□ -0.72
NPHP4-202ENST00000378161 LOC100289279A0A1B0GTE1 492 aa10.55□□□□□ -0.72
NPHP4-202ENST00000378161 MEGF11A6BM72 1044 aa10.55□□□□□ -0.72
NPHP4-202ENST00000378161 DDAH2O95865 285 aa10.55□□□□□ -0.72
NPHP4-202ENST00000378161 IL6RP08887 468 aaPredicted RBP10.55□□□□□ -0.72
NPHP4-202ENST00000378161 H2BFMP0C1H6 154 aa10.55□□□□□ -0.72
NPHP4-202ENST00000378161 CST5P28325 142 aaPredicted RBP10.55□□□□□ -0.72
NPHP4-202ENST00000378161 PIP5KL1Q5T9C9 394 aa10.55□□□□□ -0.72
NPHP4-202ENST00000378161 PWWP2BQ6NUJ5 590 aa10.55□□□□□ -0.72
NPHP4-202ENST00000378161 RFLNAQ6ZTI6 216 aa10.55□□□□□ -0.72
NPHP4-202ENST00000378161 RBM45Q8IUH3 476 aaKnown RBP10.55□□□□□ -0.72
NPHP4-202ENST00000378161 DERL1Q9BUN8 251 aa10.55□□□□□ -0.72
NPHP4-202ENST00000378161 RBKSQ9H477 322 aa10.55□□□□□ -0.72
NPHP4-202ENST00000378161 RAB18Q9NP72 206 aa10.55□□□□□ -0.72
NPHP4-202ENST00000378161 G6PC2Q9NQR9 355 aa10.55□□□□□ -0.72
NPHP4-202ENST00000378161 OR51B4Q9Y5P0 310 aa10.55□□□□□ -0.72
NPHP4-202ENST00000378161 ZNF850A8MQ14 1090 aa10.55□□□□□ -0.72
NPHP4-202ENST00000378161 H0Y8G0 127 aa10.55□□□□□ -0.72
NPHP4-202ENST00000378161 RAMP1O60894 148 aa10.55□□□□□ -0.72
NPHP4-202ENST00000378161 SLCO2B1O94956 709 aa10.55□□□□□ -0.72
NPHP4-202ENST00000378161 FCGR3AP08637 254 aa10.55□□□□□ -0.72
NPHP4-202ENST00000378161 OR2T7P0C7T2 308 aa10.55□□□□□ -0.72
NPHP4-202ENST00000378161 ARR3P36575 388 aa10.55□□□□□ -0.72
NPHP4-202ENST00000378161 MSMO1Q15800 293 aa10.55□□□□□ -0.72
NPHP4-202ENST00000378161 SIRT6Q8N6T7 355 aa10.55□□□□□ -0.72
NPHP4-202ENST00000378161 SLC46A1Q96NT5 459 aa10.55□□□□□ -0.72
NPHP4-202ENST00000378161 KCNIP1Q9NZI2 227 aa10.55□□□□□ -0.72
NPHP4-202ENST00000378161 DHDHQ9UQ10 334 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms