RNA–Protein interactions for RNA: ENST00000377270.7

FXN-201, Transcript of frataxin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FXN, Length 2,608 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-201ENST00000377270 BLKP51451 505 aa13.79□□□□□ -0.2
FXN-201ENST00000377270 UCP3P55916 312 aa13.79□□□□□ -0.2
FXN-201ENST00000377270 TMEM183AQ8IXX5 376 aa13.79□□□□□ -0.2
FXN-201ENST00000377270 ARHGEF39Q8N4T4 335 aa13.79□□□□□ -0.2
FXN-201ENST00000377270 OR13D1Q8NGV5 346 aa13.79□□□□□ -0.2
FXN-201ENST00000377270 SLC2A12Q8TD20 617 aa13.79□□□□□ -0.2
FXN-201ENST00000377270 LRRC61Q9BV99 259 aa13.79□□□□□ -0.2
FXN-201ENST00000377270 CYTL1Q9NRR1 136 aa13.79□□□□□ -0.2
FXN-201ENST00000377270 NCDNQ9UBB6 729 aa13.79□□□□□ -0.2
FXN-201ENST00000377270 PITPNC1Q9UKF7 332 aa13.79□□□□□ -0.2
FXN-201ENST00000377270 A0A1B0GWA3 101 aa13.78□□□□□ -0.2
FXN-201ENST00000377270 A0A1W2PPC4 97 aa13.78□□□□□ -0.2
FXN-201ENST00000377270 VSTM5A8MXK1 200 aa13.78□□□□□ -0.2
FXN-201ENST00000377270 TGFBR3LH3BV60 316 aa13.78□□□□□ -0.2
FXN-201ENST00000377270 SCDO00767 359 aa13.78□□□□□ -0.2
FXN-201ENST00000377270 IGLV3-19P01714 112 aa13.78□□□□□ -0.2
FXN-201ENST00000377270 LCATP04180 440 aa13.78□□□□□ -0.2
FXN-201ENST00000377270 IFI6P09912 130 aa13.78□□□□□ -0.2
FXN-201ENST00000377270 AKAIN1P0CW23 69 aa13.78□□□□□ -0.2
FXN-201ENST00000377270 SLC2A5P22732 501 aa13.78□□□□□ -0.2
FXN-201ENST00000377270 EDNRAP25101 427 aa13.78□□□□□ -0.2
FXN-201ENST00000377270 ARL6IP1Q15041 203 aa13.78□□□□□ -0.2
FXN-201ENST00000377270 VWA1Q6PCB0 445 aa13.78□□□□□ -0.2
FXN-201ENST00000377270 SELENOHQ8IZQ5 122 aaKnown RBP13.78□□□□□ -0.2
FXN-201ENST00000377270 OR5L2Q8NGL0 311 aa13.78□□□□□ -0.2
FXN-201ENST00000377270 OR8B4Q96RC9 309 aa13.78□□□□□ -0.2
FXN-201ENST00000377270 AMDHD2Q9Y303 409 aa13.78□□□□□ -0.2
FXN-201ENST00000377270 A0A0B4J2E0 115 aa13.78□□□□□ -0.2
FXN-201ENST00000377270 A0A1B0GX12 115 aa13.78□□□□□ -0.2
FXN-201ENST00000377270 C17orf105B2RV13 164 aa13.78□□□□□ -0.2
FXN-201ENST00000377270 PPP1R3DO95685 299 aa13.78□□□□□ -0.2
FXN-201ENST00000377270 OR5AC1P0C628 307 aa13.78□□□□□ -0.2
FXN-201ENST00000377270 GTF2F2P13984 249 aa13.78□□□□□ -0.2
FXN-201ENST00000377270 PSMB6P28072 239 aa13.78□□□□□ -0.2
FXN-201ENST00000377270 EFNA3P52797 238 aa13.78□□□□□ -0.2
FXN-201ENST00000377270 UBE2V1Q13404 147 aa13.78□□□□□ -0.2
FXN-201ENST00000377270 GKN2Q86XP6 184 aa13.78□□□□□ -0.2
FXN-201ENST00000377270 SYS1Q8N2H4 156 aa13.78□□□□□ -0.2
FXN-201ENST00000377270 PCGF1Q9BSM1 259 aa13.78□□□□□ -0.2
FXN-201ENST00000377270 LMF2Q9BU23 707 aaKnown RBP13.78□□□□□ -0.2
FXN-201ENST00000377270 OR8D2Q9GZM6 311 aa13.78□□□□□ -0.2
FXN-201ENST00000377270 GPR27Q9NS67 375 aa13.78□□□□□ -0.2
FXN-201ENST00000377270 ETV7Q9Y603 341 aa13.78□□□□□ -0.2
FXN-201ENST00000377270 ITGB2P05107 769 aa13.77□□□□□ -0.2
FXN-201ENST00000377270 TUBG1P23258 451 aa13.77□□□□□ -0.2
FXN-201ENST00000377270 ACAA2P42765 397 aaKnown RBP13.77□□□□□ -0.2
FXN-201ENST00000377270 IQCJQ1A5X6 159 aa13.77□□□□□ -0.2
FXN-201ENST00000377270 PRTGQ2VWP7 1150 aa13.77□□□□□ -0.2
FXN-201ENST00000377270 GRINAQ7Z429 371 aa13.77□□□□□ -0.2
FXN-201ENST00000377270 DEFB119Q8N690 84 aa13.77□□□□□ -0.2
FXN-201ENST00000377270 ADAMTS17Q8TE56 1095 aa13.77□□□□□ -0.2
FXN-201ENST00000377270 HOXB13Q92826 284 aaPredicted RBP13.77□□□□□ -0.2
FXN-201ENST00000377270 TNFRSF13CQ96RJ3 184 aa13.77□□□□□ -0.2
FXN-201ENST00000377270 ARV1Q9H2C2 271 aa13.77□□□□□ -0.2
FXN-201ENST00000377270 TUBG2Q9NRH3 451 aa13.77□□□□□ -0.2
FXN-201ENST00000377270 DNAJB12Q9NXW2 375 aaKnown RBP13.77□□□□□ -0.2
FXN-201ENST00000377270 UPB1Q9UBR1 384 aa13.77□□□□□ -0.2
FXN-201ENST00000377270 POLR3KQ9Y2Y1 108 aaPredicted RBP13.77□□□□□ -0.2
FXN-201ENST00000377270 A6NIZ1 184 aa13.77□□□□□ -0.21
FXN-201ENST00000377270 FOXS1O43638 330 aa13.77□□□□□ -0.21
FXN-201ENST00000377270 DCNP07585 359 aaKnown RBP13.77□□□□□ -0.21
FXN-201ENST00000377270 NNATQ16517 81 aa13.77□□□□□ -0.21
FXN-201ENST00000377270 CYB561A3Q8NBI2 242 aa13.77□□□□□ -0.21
FXN-201ENST00000377270 PRRX2Q99811 253 aa13.77□□□□□ -0.21
FXN-201ENST00000377270 MRPS18BQ9Y676 258 aaKnown RBP13.77□□□□□ -0.21
FXN-201ENST00000377270 RIIAD1A6NNX1 92 aa13.77□□□□□ -0.21
FXN-201ENST00000377270 SYT7O43581 403 aa13.77□□□□□ -0.21
FXN-201ENST00000377270 GPRIN2O60269 458 aa13.77□□□□□ -0.21
FXN-201ENST00000377270 UMODP07911 640 aa13.77□□□□□ -0.21
FXN-201ENST00000377270 MELTFP08582 738 aa13.77□□□□□ -0.21
FXN-201ENST00000377270 PGA4P0DJD7 388 aa13.77□□□□□ -0.21
FXN-201ENST00000377270 PGA5P0DJD9 388 aa13.77□□□□□ -0.21
FXN-201ENST00000377270 TMEM33P57088 247 aa13.77□□□□□ -0.21
FXN-201ENST00000377270 ERVFRD-1P60508 538 aa13.77□□□□□ -0.21
FXN-201ENST00000377270 UBE2KP61086 200 aa13.77□□□□□ -0.21
FXN-201ENST00000377270 CRMP1Q14194 572 aa13.77□□□□□ -0.21
FXN-201ENST00000377270 TRIM61Q5EBN2 209 aa13.77□□□□□ -0.21
FXN-201ENST00000377270 ALG10BQ5I7T1 473 aa13.77□□□□□ -0.21
FXN-201ENST00000377270 ZNF468Q5VIY5 522 aaPredicted RBP13.77□□□□□ -0.21
FXN-201ENST00000377270 TMED4Q7Z7H5 227 aa13.77□□□□□ -0.21
FXN-201ENST00000377270 RCBTB1Q8NDN9 531 aa13.77□□□□□ -0.21
FXN-201ENST00000377270 ABHD3Q8WU67 409 aa13.77□□□□□ -0.21
FXN-201ENST00000377270 ORAOV1Q8WV07 137 aa13.77□□□□□ -0.21
FXN-201ENST00000377270 VSTM2LQ96N03 204 aa13.77□□□□□ -0.21
FXN-201ENST00000377270 ZNF576Q9H609 170 aa13.77□□□□□ -0.21
FXN-201ENST00000377270 PRTFDC1Q9NRG1 225 aa13.77□□□□□ -0.21
FXN-201ENST00000377270 SLC2A8Q9NY64 477 aa13.77□□□□□ -0.21
FXN-201ENST00000377270 FARSAQ9Y285 508 aaKnown RBP13.77□□□□□ -0.21
FXN-201ENST00000377270 MRPS33Q9Y291 106 aaKnown RBP13.77□□□□□ -0.21
FXN-201ENST00000377270 M0R296 226 aa13.76□□□□□ -0.21
FXN-201ENST00000377270 SRPX2O60687 465 aaPredicted RBP13.76□□□□□ -0.21
FXN-201ENST00000377270 GYPBP06028 91 aa13.76□□□□□ -0.21
FXN-201ENST00000377270 NGFRP08138 427 aa13.76□□□□□ -0.21
FXN-201ENST00000377270 DND1Q8IYX4 353 aaKnown RBP13.76□□□□□ -0.21
FXN-201ENST00000377270 METTL27Q8N6F8 245 aaPredicted RBP13.76□□□□□ -0.21
FXN-201ENST00000377270 OR2V1Q8NHB1 315 aa13.76□□□□□ -0.21
FXN-201ENST00000377270 DGAT2Q96PD7 388 aa13.76□□□□□ -0.21
FXN-201ENST00000377270 PHB2Q99623 299 aa13.76□□□□□ -0.21
FXN-201ENST00000377270 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.76□□□□□ -0.21
FXN-201ENST00000377270 SLC5A6Q9Y289 635 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms