RNA–Protein interactions for RNA: ENST00000376957.6

SRM-201, Transcript of spermidine synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRM, Length 1,266 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-201ENST00000376957 LOC100130705A0A1B0GUX0 176 aa18.43■□□□□ 0.54
SRM-201ENST00000376957 ZNF732B4DXR9 585 aa18.43■□□□□ 0.54
SRM-201ENST00000376957 DLGAP1O14490 977 aa18.43■□□□□ 0.54
SRM-201ENST00000376957 SRSF10O75494 262 aaKnown RBP18.43■□□□□ 0.54
SRM-201ENST00000376957 ECDO95905 644 aaPredicted RBP18.43■□□□□ 0.54
SRM-201ENST00000376957 FAHP16930 419 aa18.43■□□□□ 0.54
SRM-201ENST00000376957 ACTA2P62736 377 aa18.43■□□□□ 0.54
SRM-201ENST00000376957 ACTG2P63267 376 aa18.43■□□□□ 0.54
SRM-201ENST00000376957 PAX8Q06710 450 aa18.43■□□□□ 0.54
SRM-201ENST00000376957 CEP78Q5JTW2 689 aa18.43■□□□□ 0.54
SRM-201ENST00000376957 C1orf229Q6ZS94 237 aaPredicted RBP18.43■□□□□ 0.54
SRM-201ENST00000376957 USP43Q70EL4 1123 aa18.43■□□□□ 0.54
SRM-201ENST00000376957 C11orf53Q8IXP5 236 aa18.43■□□□□ 0.54
SRM-201ENST00000376957 PNLDC1Q8NA58 520 aaKnown RBP18.43■□□□□ 0.54
SRM-201ENST00000376957 RPL3LQ92901 407 aaKnown RBP18.43■□□□□ 0.54
SRM-201ENST00000376957 UBE2FQ969M7 185 aa18.43■□□□□ 0.54
SRM-201ENST00000376957 SMPD3Q9NY59 655 aaPredicted RBP18.43■□□□□ 0.54
SRM-201ENST00000376957 NKX6-3A6NJ46 265 aa18.42■□□□□ 0.54
SRM-201ENST00000376957 SRRM5B3KS81 715 aa18.42■□□□□ 0.54
SRM-201ENST00000376957 SYT7O43581 403 aa18.42■□□□□ 0.54
SRM-201ENST00000376957 FADS2O95864 444 aaKnown RBP18.42■□□□□ 0.54
SRM-201ENST00000376957 SERPINA3P01011 423 aa18.42■□□□□ 0.54
SRM-201ENST00000376957 SSX6Q7RTT6 188 aa18.42■□□□□ 0.54
SRM-201ENST00000376957 FAM90A1Q86YD7 464 aa18.42■□□□□ 0.54
SRM-201ENST00000376957 ZNF573Q86YE8 665 aa18.42■□□□□ 0.54
SRM-201ENST00000376957 ACBD7Q8N6N7 88 aa18.42■□□□□ 0.54
SRM-201ENST00000376957 MBOAT4Q96T53 435 aa18.42■□□□□ 0.54
SRM-201ENST00000376957 SLC29A1Q99808 456 aa18.42■□□□□ 0.54
SRM-201ENST00000376957 DNTTIP1Q9H147 329 aa18.42■□□□□ 0.54
SRM-201ENST00000376957 PPP1R3EQ9H7J1 279 aa18.42■□□□□ 0.54
SRM-201ENST00000376957 FAM118AQ9NWS6 357 aa18.42■□□□□ 0.54
SRM-201ENST00000376957 OPN4Q9UHM6 478 aa18.42■□□□□ 0.54
SRM-201ENST00000376957 NUP50Q9UKX7 468 aa18.42■□□□□ 0.54
SRM-201ENST00000376957 SLC22A13Q9Y226 551 aa18.42■□□□□ 0.54
SRM-201ENST00000376957 V9GYS6 101 aa18.42■□□□□ 0.54
SRM-201ENST00000376957 P2RY10O00398 339 aa18.41■□□□□ 0.54
SRM-201ENST00000376957 GPR37O15354 613 aa18.41■□□□□ 0.54
SRM-201ENST00000376957 NDUFB3O43676 98 aa18.41■□□□□ 0.54
SRM-201ENST00000376957 RPSAP08865 295 aaKnown RBP18.41■□□□□ 0.54
SRM-201ENST00000376957 UBCP0CG48 685 aaKnown RBP18.41■□□□□ 0.54
SRM-201ENST00000376957 CATSPERDQ86XM0 798 aa18.41■□□□□ 0.54
SRM-201ENST00000376957 EGFL6Q8IUX8 553 aa18.41■□□□□ 0.54
SRM-201ENST00000376957 HPSE2Q8WWQ2 592 aa18.41■□□□□ 0.54
SRM-201ENST00000376957 PPP1R14AQ96A00 147 aa18.41■□□□□ 0.54
SRM-201ENST00000376957 C10orf35Q96D05 121 aa18.41■□□□□ 0.54
SRM-201ENST00000376957 MED30Q96HR3 178 aa18.41■□□□□ 0.54
SRM-201ENST00000376957 SLC7A11Q9UPY5 501 aa18.41■□□□□ 0.54
SRM-201ENST00000376957 POLDIP2Q9Y2S7 368 aa18.41■□□□□ 0.54
SRM-201ENST00000376957 RPL36Q9Y3U8 105 aaKnown RBP18.41■□□□□ 0.54
SRM-201ENST00000376957 ARHGAP32A7KAX9 2087 aa18.4■□□□□ 0.54
SRM-201ENST00000376957 IGHV3OR15-7A0A075B7D8 119 aa18.4■□□□□ 0.54
SRM-201ENST00000376957 GATBO75879 557 aaKnown RBP18.4■□□□□ 0.54
SRM-201ENST00000376957 GLRA1P23415 457 aa18.4■□□□□ 0.54
SRM-201ENST00000376957 ODF4Q2M2E3 257 aa18.4■□□□□ 0.54
SRM-201ENST00000376957 LRRC10Q5BKY1 277 aa18.4■□□□□ 0.54
SRM-201ENST00000376957 ZNF841Q6ZN19 808 aa18.4■□□□□ 0.54
SRM-201ENST00000376957 ENTHD1Q8IYW4 607 aa18.4■□□□□ 0.54
SRM-201ENST00000376957 RHOXF1Q8NHV9 184 aa18.4■□□□□ 0.54
SRM-201ENST00000376957 ZFAND2BQ8WV99 257 aa18.4■□□□□ 0.54
SRM-201ENST00000376957 RORBQ92753 470 aa18.4■□□□□ 0.54
SRM-201ENST00000376957 TMIGD2Q96BF3 282 aa18.4■□□□□ 0.54
SRM-201ENST00000376957 MS4A7Q9GZW8 240 aaPredicted RBP18.4■□□□□ 0.54
SRM-201ENST00000376957 OR51I2Q9H344 312 aa18.4■□□□□ 0.54
SRM-201ENST00000376957 RASL12Q9NYN1 266 aa18.4■□□□□ 0.54
SRM-201ENST00000376957 TRIM77I1YAP6 450 aa18.39■□□□□ 0.53
SRM-201ENST00000376957 DVL1O14640 695 aa18.39■□□□□ 0.53
SRM-201ENST00000376957 TNFRSF13BO14836 293 aaPredicted RBP18.39■□□□□ 0.53
SRM-201ENST00000376957 SLC16A6O15403 523 aa18.39■□□□□ 0.53
SRM-201ENST00000376957 AKR7A2O43488 359 aa18.39■□□□□ 0.53
SRM-201ENST00000376957 EGR1P18146 543 aa18.39■□□□□ 0.53
SRM-201ENST00000376957 CCL1P22362 96 aa18.39■□□□□ 0.53
SRM-201ENST00000376957 ZNF85Q03923 595 aa18.39■□□□□ 0.53
SRM-201ENST00000376957 TP53I3Q53FA7 332 aa18.39■□□□□ 0.53
SRM-201ENST00000376957 KLHL22Q53GT1 634 aa18.39■□□□□ 0.53
SRM-201ENST00000376957 TMEM244Q5VVB8 128 aa18.39■□□□□ 0.53
SRM-201ENST00000376957 PACRGLQ8N7B6 248 aa18.39■□□□□ 0.53
SRM-201ENST00000376957 OR14K1Q8NGZ2 314 aa18.39■□□□□ 0.53
SRM-201ENST00000376957 ST8SIA4Q92187 359 aa18.39■□□□□ 0.53
SRM-201ENST00000376957 INPP5EQ9NRR6 644 aa18.39■□□□□ 0.53
SRM-201ENST00000376957 CTSZQ9UBR2 303 aa18.39■□□□□ 0.53
SRM-201ENST00000376957 EXOGQ9Y2C4 368 aaKnown RBP18.39■□□□□ 0.53
SRM-201ENST00000376957 ANKRD61A6NGH8 418 aa18.38■□□□□ 0.53
SRM-201ENST00000376957 E9PQ18 207 aa18.38■□□□□ 0.53
SRM-201ENST00000376957 HTR1AP08908 422 aa18.38■□□□□ 0.53
SRM-201ENST00000376957 BPIFB3P59826 476 aa18.38■□□□□ 0.53
SRM-201ENST00000376957 GMFBP60983 142 aa18.38■□□□□ 0.53
SRM-201ENST00000376957 PAX2Q02962 417 aa18.38■□□□□ 0.53
SRM-201ENST00000376957 RAB40BQ12829 278 aa18.38■□□□□ 0.53
SRM-201ENST00000376957 MRPL28Q13084 256 aaKnown RBP18.38■□□□□ 0.53
SRM-201ENST00000376957 CDONQ4KMG0 1287 aa18.38■□□□□ 0.53
SRM-201ENST00000376957 WDR38Q5JTN6 314 aa18.38■□□□□ 0.53
SRM-201ENST00000376957 ATPAF1Q5TC12 328 aaPredicted RBP18.38■□□□□ 0.53
SRM-201ENST00000376957 METTL11BQ5VVY1 283 aa18.38■□□□□ 0.53
SRM-201ENST00000376957 TTC23Q5W5X9 447 aa18.38■□□□□ 0.53
SRM-201ENST00000376957 TMEM42Q69YG0 159 aa18.38■□□□□ 0.53
SRM-201ENST00000376957 HAGHLQ6PII5 290 aaPredicted RBP18.38■□□□□ 0.53
SRM-201ENST00000376957 HAVCR2Q8TDQ0 301 aa18.38■□□□□ 0.53
SRM-201ENST00000376957 CCL13Q99616 98 aa18.38■□□□□ 0.53
SRM-201ENST00000376957 NLKQ9UBE8 527 aa18.38■□□□□ 0.53
SRM-201ENST00000376957 ATRQ13535 2644 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms