RNA–Protein interactions for RNA: ENST00000376659.9

TRIM39-202, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM39, Length 3,535 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-202ENST00000376659 CRHP06850 196 aa8.37□□□□□ -1.07
TRIM39-202ENST00000376659 DBHP09172 617 aa8.37□□□□□ -1.07
TRIM39-202ENST00000376659 ZNF43P17038 809 aa8.37□□□□□ -1.07
TRIM39-202ENST00000376659 CD34P28906 385 aa8.37□□□□□ -1.07
TRIM39-202ENST00000376659 PTGFRP43088 359 aa8.37□□□□□ -1.07
TRIM39-202ENST00000376659 NKPD1Q17RQ9 610 aa8.37□□□□□ -1.07
TRIM39-202ENST00000376659 STX12Q86Y82 276 aa8.37□□□□□ -1.07
TRIM39-202ENST00000376659 ZNF100Q8IYN0 542 aa8.37□□□□□ -1.07
TRIM39-202ENST00000376659 ARRDC1Q8N5I2 433 aa8.37□□□□□ -1.07
TRIM39-202ENST00000376659 POC1AQ8NBT0 407 aa8.37□□□□□ -1.07
TRIM39-202ENST00000376659 ZNF75AQ96N20 296 aa8.37□□□□□ -1.07
TRIM39-202ENST00000376659 SF3B5Q9BWJ5 86 aaKnown RBP8.37□□□□□ -1.07
TRIM39-202ENST00000376659 DEFB126Q9BYW3 111 aa8.37□□□□□ -1.07
TRIM39-202ENST00000376659 SELENOIQ9C0D9 397 aa8.37□□□□□ -1.07
TRIM39-202ENST00000376659 FXYD6-FXYD2A0A087WZ82 144 aa8.36□□□□□ -1.07
TRIM39-202ENST00000376659 METTL21EPA6NDL7 271 aa8.36□□□□□ -1.07
TRIM39-202ENST00000376659 RFPL3SP0C7P2 107 aa8.36□□□□□ -1.07
TRIM39-202ENST00000376659 FPR2P25090 351 aa8.36□□□□□ -1.07
TRIM39-202ENST00000376659 TSPAN7P41732 249 aa8.36□□□□□ -1.07
TRIM39-202ENST00000376659 RAC1P63000 192 aa8.36□□□□□ -1.07
TRIM39-202ENST00000376659 ZSCAN4Q8NAM6 433 aaPredicted RBP8.36□□□□□ -1.07
TRIM39-202ENST00000376659 OR10H5Q8NGA6 315 aa8.36□□□□□ -1.07
TRIM39-202ENST00000376659 KCNG3Q8TAE7 436 aa8.36□□□□□ -1.07
TRIM39-202ENST00000376659 FGFBP3Q8TAT2 258 aa8.36□□□□□ -1.07
TRIM39-202ENST00000376659 MARCH1Q8TCQ1 289 aa8.36□□□□□ -1.07
TRIM39-202ENST00000376659 ROBO4Q8WZ75 1007 aa8.36□□□□□ -1.07
TRIM39-202ENST00000376659 FGF23Q9GZV9 251 aaPredicted RBP8.36□□□□□ -1.07
TRIM39-202ENST00000376659 ARL6Q9H0F7 186 aa8.36□□□□□ -1.07
TRIM39-202ENST00000376659 FXYD6Q9H0Q3 95 aa8.36□□□□□ -1.07
TRIM39-202ENST00000376659 A0A0D9SG52 128 aa8.36□□□□□ -1.07
TRIM39-202ENST00000376659 TEX13DA0A0J9YY54 714 aaPredicted RBP8.36□□□□□ -1.07
TRIM39-202ENST00000376659 B4E171 279 aa8.36□□□□□ -1.07
TRIM39-202ENST00000376659 TNFSF11O14788 317 aa8.36□□□□□ -1.07
TRIM39-202ENST00000376659 MMP7P09237 267 aaPredicted RBP8.36□□□□□ -1.07
TRIM39-202ENST00000376659 AVPR2P30518 371 aa8.36□□□□□ -1.07
TRIM39-202ENST00000376659 DHPSP49366 369 aaPredicted RBP8.36□□□□□ -1.07
TRIM39-202ENST00000376659 BPIFB3P59826 476 aa8.36□□□□□ -1.07
TRIM39-202ENST00000376659 CXADRP78310 365 aa8.36□□□□□ -1.07
TRIM39-202ENST00000376659 MST1LQ2TV78 715 aa8.36□□□□□ -1.07
TRIM39-202ENST00000376659 RNASE10Q5GAN6 216 aaKnown RBP8.36□□□□□ -1.07
TRIM39-202ENST00000376659 KLHL24Q6TFL4 600 aa8.36□□□□□ -1.07
TRIM39-202ENST00000376659 HIST2H2ABQ8IUE6 130 aaPredicted RBP8.36□□□□□ -1.07
TRIM39-202ENST00000376659 Q8NFD4 153 aa8.36□□□□□ -1.07
TRIM39-202ENST00000376659 MFFQ9GZY8 342 aa8.36□□□□□ -1.07
TRIM39-202ENST00000376659 BANF2Q9H503 90 aa8.36□□□□□ -1.07
TRIM39-202ENST00000376659 PCDHB16Q9NRJ7 776 aa8.36□□□□□ -1.07
TRIM39-202ENST00000376659 GHRLQ9UBU3 117 aa8.36□□□□□ -1.07
TRIM39-202ENST00000376659 FARSAQ9Y285 508 aaKnown RBP8.36□□□□□ -1.07
TRIM39-202ENST00000376659 POM121CA8CG34 1229 aa8.36□□□□□ -1.07
TRIM39-202ENST00000376659 SFT2D2O95562 160 aa8.36□□□□□ -1.07
TRIM39-202ENST00000376659 APOC1P02654 83 aa8.36□□□□□ -1.07
TRIM39-202ENST00000376659 GP1BAP07359 652 aa8.36□□□□□ -1.07
TRIM39-202ENST00000376659 FAM157CP0CG43 387 aa8.36□□□□□ -1.07
TRIM39-202ENST00000376659 LIPCP11150 499 aa8.36□□□□□ -1.07
TRIM39-202ENST00000376659 CD79AP11912 226 aa8.36□□□□□ -1.07
TRIM39-202ENST00000376659 LMO1P25800 156 aa8.36□□□□□ -1.07
TRIM39-202ENST00000376659 TIPARPQ7Z3E1 657 aaKnown RBP8.36□□□□□ -1.07
TRIM39-202ENST00000376659 OR4K17Q8NGC6 315 aa8.36□□□□□ -1.07
TRIM39-202ENST00000376659 OR52H1Q8NGJ2 320 aa8.36□□□□□ -1.07
TRIM39-202ENST00000376659 TERB2Q8NHR7 220 aa8.36□□□□□ -1.07
TRIM39-202ENST00000376659 PP6455Q8WZ26 134 aa8.36□□□□□ -1.07
TRIM39-202ENST00000376659 SLC39A7Q92504 469 aa8.36□□□□□ -1.07
TRIM39-202ENST00000376659 SPSB4Q96A44 273 aa8.36□□□□□ -1.07
TRIM39-202ENST00000376659 PLA2G2EQ9NZK7 142 aa8.36□□□□□ -1.07
TRIM39-202ENST00000376659 CACNA1CQ13936 2221 aa8.35□□□□□ -1.07
TRIM39-202ENST00000376659 MED12Q93074 2177 aa8.35□□□□□ -1.07
TRIM39-202ENST00000376659 LAMA5O15230 3695 aa8.35□□□□□ -1.07
TRIM39-202ENST00000376659 IGKV1-12A0A0C4DH73 117 aa8.35□□□□□ -1.07
TRIM39-202ENST00000376659 KCNAB3O43448 404 aa8.35□□□□□ -1.07
TRIM39-202ENST00000376659 IGKV1D-12P01611 117 aa8.35□□□□□ -1.07
TRIM39-202ENST00000376659 CST2P09228 141 aa8.35□□□□□ -1.07
TRIM39-202ENST00000376659 ADCYAP1P18509 176 aa8.35□□□□□ -1.07
TRIM39-202ENST00000376659 PPM1FP49593 454 aaPredicted RBP8.35□□□□□ -1.07
TRIM39-202ENST00000376659 SSR4P51571 173 aa8.35□□□□□ -1.07
TRIM39-202ENST00000376659 PPIAP62937 165 aaKnown RBP8.35□□□□□ -1.07
TRIM39-202ENST00000376659 ACTBL2Q562R1 376 aa8.35□□□□□ -1.07
TRIM39-202ENST00000376659 OPN5Q6U736 354 aa8.35□□□□□ -1.07
TRIM39-202ENST00000376659 CLEC18BQ6UXF7 455 aa8.35□□□□□ -1.07
TRIM39-202ENST00000376659 COLCA1Q6ZS62 124 aa8.35□□□□□ -1.07
TRIM39-202ENST00000376659 TMED4Q7Z7H5 227 aa8.35□□□□□ -1.07
TRIM39-202ENST00000376659 OR4K15Q8NH41 348 aa8.35□□□□□ -1.07
TRIM39-202ENST00000376659 TNFAIP8L1Q8WVP5 186 aa8.35□□□□□ -1.07
TRIM39-202ENST00000376659 RAB3CQ96E17 227 aa8.35□□□□□ -1.07
TRIM39-202ENST00000376659 TMEM59Q9BXS4 323 aa8.35□□□□□ -1.07
TRIM39-202ENST00000376659 DNTTIP1Q9H147 329 aa8.35□□□□□ -1.07
TRIM39-202ENST00000376659 CCDC85CA6NKD9 419 aa8.35□□□□□ -1.07
TRIM39-202ENST00000376659 DHHO43323 396 aa8.35□□□□□ -1.07
TRIM39-202ENST00000376659 EIF1BO60739 113 aaKnown RBP8.35□□□□□ -1.07
TRIM39-202ENST00000376659 VAMP5O95183 116 aa8.35□□□□□ -1.07
TRIM39-202ENST00000376659 FGL1Q08830 312 aa8.35□□□□□ -1.07
TRIM39-202ENST00000376659 ZNF546Q86UE3 836 aa8.35□□□□□ -1.07
TRIM39-202ENST00000376659 SLC30A7Q8NEW0 376 aa8.35□□□□□ -1.07
TRIM39-202ENST00000376659 PIK3IP1Q96FE7 263 aa8.35□□□□□ -1.07
TRIM39-202ENST00000376659 IL36GQ9NZH8 169 aa8.35□□□□□ -1.07
TRIM39-202ENST00000376659 hCG_38984A0A1B0GV85 526 aa8.34□□□□□ -1.07
TRIM39-202ENST00000376659 MSGN1A6NI15 193 aa8.34□□□□□ -1.07
TRIM39-202ENST00000376659 TP53I11O14683 189 aa8.34□□□□□ -1.07
TRIM39-202ENST00000376659 FAHP16930 419 aa8.34□□□□□ -1.07
TRIM39-202ENST00000376659 ZNF20P17024 532 aa8.34□□□□□ -1.07
TRIM39-202ENST00000376659 SRD5A2P31213 254 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms