RNA–Protein interactions for RNA: ENST00000376570.8

DDR1-227, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDR1, Length 3,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-227ENST00000376570 DEFB124Q8NES8 71 aa10.3□□□□□ -0.76
DDR1-227ENST00000376570 OR51F2Q8NH61 342 aa10.3□□□□□ -0.76
DDR1-227ENST00000376570 OR51H1Q8NH63 302 aa10.3□□□□□ -0.76
DDR1-227ENST00000376570 STOML3Q8TAV4 291 aa10.3□□□□□ -0.76
DDR1-227ENST00000376570 FGF11Q92914 225 aa10.3□□□□□ -0.76
DDR1-227ENST00000376570 SLAMF9Q96A28 289 aa10.3□□□□□ -0.76
DDR1-227ENST00000376570 DUSP13Q9UII6 198 aa10.3□□□□□ -0.76
DDR1-227ENST00000376570 KLK13Q9UKR3 277 aa10.3□□□□□ -0.76
DDR1-227ENST00000376570 C7orf66A4D0T2 115 aa10.3□□□□□ -0.76
DDR1-227ENST00000376570 SSX5O60225 188 aa10.3□□□□□ -0.76
DDR1-227ENST00000376570 MTRF1O75570 445 aaKnown RBP10.3□□□□□ -0.76
DDR1-227ENST00000376570 RNLSQ5VYX0 342 aa10.3□□□□□ -0.76
DDR1-227ENST00000376570 WDR74Q6RFH5 385 aaPredicted RBP10.3□□□□□ -0.76
DDR1-227ENST00000376570 GLDNQ6ZMI3 551 aaPredicted RBP10.3□□□□□ -0.76
DDR1-227ENST00000376570 WDSUB1Q8N9V3 476 aa10.3□□□□□ -0.76
DDR1-227ENST00000376570 PLPP5Q8NEB5 264 aa10.3□□□□□ -0.76
DDR1-227ENST00000376570 EVA1AQ9H8M9 152 aa10.3□□□□□ -0.76
DDR1-227ENST00000376570 TREM2Q9NZC2 230 aa10.3□□□□□ -0.76
DDR1-227ENST00000376570 UBE2J1Q9Y385 318 aaPredicted RBP10.3□□□□□ -0.76
DDR1-227ENST00000376570 CSAG2Q9Y5P2 127 aa10.3□□□□□ -0.76
DDR1-227ENST00000376570 DXOO77932 396 aaKnown RBP10.29□□□□□ -0.76
DDR1-227ENST00000376570 PIGYQ3MUY2 71 aa10.29□□□□□ -0.76
DDR1-227ENST00000376570 CATSPERDQ86XM0 798 aa10.29□□□□□ -0.76
DDR1-227ENST00000376570 C12orf57Q99622 126 aa10.29□□□□□ -0.76
DDR1-227ENST00000376570 NMNAT2Q9BZQ4 307 aa10.29□□□□□ -0.76
DDR1-227ENST00000376570 PTTG3PQ9NZH4 202 aa10.29□□□□□ -0.76
DDR1-227ENST00000376570 RAB22AQ9UL26 194 aa10.29□□□□□ -0.76
DDR1-227ENST00000376570 FAM96BQ9Y3D0 163 aa10.29□□□□□ -0.76
DDR1-227ENST00000376570 LHFPL6Q9Y693 200 aa10.29□□□□□ -0.76
DDR1-227ENST00000376570 NAP1L6A6NFF2 107 aa10.29□□□□□ -0.76
DDR1-227ENST00000376570 J3QRE1 110 aa10.29□□□□□ -0.76
DDR1-227ENST00000376570 SHOXO15266 292 aa10.29□□□□□ -0.76
DDR1-227ENST00000376570 NDUFB6O95139 128 aa10.29□□□□□ -0.76
DDR1-227ENST00000376570 IFNA21P01568 189 aa10.29□□□□□ -0.76
DDR1-227ENST00000376570 NMBP08949 121 aa10.29□□□□□ -0.76
DDR1-227ENST00000376570 GIPP09681 153 aaPredicted RBP10.29□□□□□ -0.76
DDR1-227ENST00000376570 ICAM2P13598 275 aa10.29□□□□□ -0.76
DDR1-227ENST00000376570 GPM6AP51674 278 aa10.29□□□□□ -0.76
DDR1-227ENST00000376570 ACSM1Q08AH1 577 aa10.29□□□□□ -0.76
DDR1-227ENST00000376570 SHBQ15464 509 aa10.29□□□□□ -0.76
DDR1-227ENST00000376570 PHYHD1Q5SRE7 291 aa10.29□□□□□ -0.76
DDR1-227ENST00000376570 H3F3CQ6NXT2 135 aa10.29□□□□□ -0.76
DDR1-227ENST00000376570 SULF2Q8IWU5 870 aa10.29□□□□□ -0.76
DDR1-227ENST00000376570 FAM181AQ8N9Y4 354 aa10.29□□□□□ -0.76
DDR1-227ENST00000376570 OR9K2Q8NGE7 335 aa10.29□□□□□ -0.76
DDR1-227ENST00000376570 FOXRED1Q96CU9 486 aaPredicted RBP10.29□□□□□ -0.76
DDR1-227ENST00000376570 FBXO17Q96EF6 278 aa10.29□□□□□ -0.76
DDR1-227ENST00000376570 EDEM2Q9BV94 578 aa10.29□□□□□ -0.76
DDR1-227ENST00000376570 ZNF581Q9P0T4 197 aa10.29□□□□□ -0.76
DDR1-227ENST00000376570 TCFL5Q9UL49 500 aa10.29□□□□□ -0.76
DDR1-227ENST00000376570 KCNK7Q9Y2U2 307 aa10.29□□□□□ -0.76
DDR1-227ENST00000376570 NCOA6Q14686 2063 aaPredicted RBP10.29□□□□□ -0.76
DDR1-227ENST00000376570 ANKRD20A5PA0PJZ0 165 aa10.29□□□□□ -0.76
DDR1-227ENST00000376570 PTBP1P26599 531 aaKnown RBP eCLIP10.29□□□□□ -0.764e-6■■■■■ 35.7
DDR1-227ENST00000376570 HOXC12P31275 282 aa10.29□□□□□ -0.76
DDR1-227ENST00000376570 LIMK1P53667 647 aa10.29□□□□□ -0.76
DDR1-227ENST00000376570 H2BFSP57053 126 aa10.29□□□□□ -0.76
DDR1-227ENST00000376570 IGLV3-21P80748 117 aaPredicted RBP10.29□□□□□ -0.76
DDR1-227ENST00000376570 IAH1Q2TAA2 248 aaPredicted RBP10.29□□□□□ -0.76
DDR1-227ENST00000376570 SNAI3Q3KNW1 292 aa10.29□□□□□ -0.76
DDR1-227ENST00000376570 LINC00114Q6XXX2 140 aa10.29□□□□□ -0.76
DDR1-227ENST00000376570 TUSC5Q8IXB3 177 aa10.29□□□□□ -0.76
DDR1-227ENST00000376570 BPIFCQ8NFQ6 507 aa10.29□□□□□ -0.76
DDR1-227ENST00000376570 KCNG3Q8TAE7 436 aa10.29□□□□□ -0.76
DDR1-227ENST00000376570 C15orf40Q8WUR7 153 aa10.29□□□□□ -0.76
DDR1-227ENST00000376570 ATPIF1Q9UII2 106 aa10.29□□□□□ -0.76
DDR1-227ENST00000376570 ZNF175Q9Y473 711 aa10.29□□□□□ -0.76
DDR1-227ENST00000376570 A0A1B0GUH1 482 aa10.28□□□□□ -0.76
DDR1-227ENST00000376570 SOX15O60248 233 aa10.28□□□□□ -0.76
DDR1-227ENST00000376570 ANOS1P23352 680 aa10.28□□□□□ -0.76
DDR1-227ENST00000376570 HAAOP46952 286 aa10.28□□□□□ -0.76
DDR1-227ENST00000376570 C17orf78Q8N4C9 275 aa10.28□□□□□ -0.76
DDR1-227ENST00000376570 NKX6-2Q9C056 277 aaPredicted RBP10.28□□□□□ -0.76
DDR1-227ENST00000376570 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.28□□□□□ -0.76
DDR1-227ENST00000376570 B4GALT7Q9UBV7 327 aa10.28□□□□□ -0.76
DDR1-227ENST00000376570 ETV7Q9Y603 341 aa10.28□□□□□ -0.76
DDR1-227ENST00000376570 OTOGLQ3ZCN5 2332 aa10.28□□□□□ -0.76
DDR1-227ENST00000376570 A0A1W2PPC1 479 aa10.28□□□□□ -0.76
DDR1-227ENST00000376570 HSD17B6O14756 317 aa10.28□□□□□ -0.76
DDR1-227ENST00000376570 PPT1P50897 306 aa10.28□□□□□ -0.76
DDR1-227ENST00000376570 ARF1P84077 181 aaKnown RBP10.28□□□□□ -0.76
DDR1-227ENST00000376570 DYRK1AQ13627 763 aa10.28□□□□□ -0.76
DDR1-227ENST00000376570 SLC22A25Q6T423 547 aa10.28□□□□□ -0.76
DDR1-227ENST00000376570 LRRC75AQ8NAA5 344 aa10.28□□□□□ -0.76
DDR1-227ENST00000376570 SEMA6DQ8NFY4 1073 aa10.28□□□□□ -0.76
DDR1-227ENST00000376570 OR5T1Q8NG75 326 aa10.28□□□□□ -0.76
DDR1-227ENST00000376570 DNASE2BQ8WZ79 361 aa10.28□□□□□ -0.76
DDR1-227ENST00000376570 PRRT1Q99946 306 aa10.28□□□□□ -0.76
DDR1-227ENST00000376570 SRXN1Q9BYN0 137 aa10.28□□□□□ -0.76
DDR1-227ENST00000376570 BOD1L1Q8NFC6 3051 aa10.28□□□□□ -0.76
DDR1-227ENST00000376570 PTPRSQ13332 1948 aa10.28□□□□□ -0.76
DDR1-227ENST00000376570 TMEM200CA6NKL6 621 aa10.28□□□□□ -0.76
DDR1-227ENST00000376570 SULT1B1O43704 296 aa10.28□□□□□ -0.76
DDR1-227ENST00000376570 LYZL6O75951 148 aa10.28□□□□□ -0.76
DDR1-227ENST00000376570 SNRNP70P08621 437 aaKnown RBP10.28□□□□□ -0.76
DDR1-227ENST00000376570 ZNF14P17017 642 aaPredicted RBP10.28□□□□□ -0.76
DDR1-227ENST00000376570 RAB6AP20340 208 aa10.28□□□□□ -0.76
DDR1-227ENST00000376570 GLP1RP43220 463 aa10.28□□□□□ -0.76
DDR1-227ENST00000376570 NOVA1P51513 510 aaKnown RBP10.28□□□□□ -0.76
DDR1-227ENST00000376570 ATPAF1Q5TC12 328 aaPredicted RBP10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms