RNA–Protein interactions for RNA: ENST00000375740.7

MSH5-202, Transcript of mutS homolog 5, humanhuman

TSL 1 (best) BASIC

Gene MSH5, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-202ENST00000375740 TMEM235A6NFC5 223 aa12.28□□□□□ -0.44
MSH5-202ENST00000375740 S100A9P06702 114 aaKnown RBP12.28□□□□□ -0.44
MSH5-202ENST00000375740 SP9P0CG40 484 aa12.28□□□□□ -0.44
MSH5-202ENST00000375740 NR2C1P13056 603 aa12.28□□□□□ -0.44
MSH5-202ENST00000375740 ZNF44P15621 663 aa12.28□□□□□ -0.44
MSH5-202ENST00000375740 PPT1P50897 306 aa12.28□□□□□ -0.44
MSH5-202ENST00000375740 CAPZA1P52907 286 aa12.28□□□□□ -0.44
MSH5-202ENST00000375740 GRB2P62993 217 aaKnown RBP12.28□□□□□ -0.44
MSH5-202ENST00000375740 QRFPP83859 136 aa12.28□□□□□ -0.44
MSH5-202ENST00000375740 TGIF1Q15583 401 aa12.28□□□□□ -0.44
MSH5-202ENST00000375740 GFOD2Q3B7J2 385 aa12.28□□□□□ -0.44
MSH5-202ENST00000375740 ACER2Q5QJU3 275 aa12.28□□□□□ -0.44
MSH5-202ENST00000375740 C10orf128Q5T292 105 aa12.28□□□□□ -0.44
MSH5-202ENST00000375740 ANGPTL5Q86XS5 388 aa12.28□□□□□ -0.44
MSH5-202ENST00000375740 TMEM123Q8N131 208 aa12.28□□□□□ -0.44
MSH5-202ENST00000375740 LRRC18Q8N456 261 aa12.28□□□□□ -0.44
MSH5-202ENST00000375740 CMBLQ96DG6 245 aa12.28□□□□□ -0.44
MSH5-202ENST00000375740 NELFAQ9H3P2 528 aa12.28□□□□□ -0.44
MSH5-202ENST00000375740 SLC5A6Q9Y289 635 aa12.28□□□□□ -0.44
MSH5-202ENST00000375740 C5orf63A6NC05 138 aa12.27□□□□□ -0.44
MSH5-202ENST00000375740 OR5H15A6NDH6 313 aa12.27□□□□□ -0.44
MSH5-202ENST00000375740 E9PLN8 166 aa12.27□□□□□ -0.44
MSH5-202ENST00000375740 M0QYG6 137 aa12.27□□□□□ -0.44
MSH5-202ENST00000375740 RAB27BO00194 218 aa12.27□□□□□ -0.44
MSH5-202ENST00000375740 TXNL1O43396 289 aa12.27□□□□□ -0.44
MSH5-202ENST00000375740 RAB3DO95716 219 aa12.27□□□□□ -0.44
MSH5-202ENST00000375740 CD8AP01732 235 aa12.27□□□□□ -0.44
MSH5-202ENST00000375740 RFPL3SP0C7P2 107 aa12.27□□□□□ -0.44
MSH5-202ENST00000375740 VSIG8P0DPA2 414 aa12.27□□□□□ -0.44
MSH5-202ENST00000375740 AGTR1P30556 359 aa12.27□□□□□ -0.44
MSH5-202ENST00000375740 ZNF93P35789 620 aaPredicted RBP12.27□□□□□ -0.44
MSH5-202ENST00000375740 ENDOGQ14249 297 aaKnown RBP12.27□□□□□ -0.44
MSH5-202ENST00000375740 OR14L1PQ8NHC6 308 aa12.27□□□□□ -0.44
MSH5-202ENST00000375740 TAAR9Q96RI9 348 aa12.27□□□□□ -0.44
MSH5-202ENST00000375740 STRADBQ9C0K7 418 aa12.27□□□□□ -0.44
MSH5-202ENST00000375740 OR51M1Q9H341 326 aa12.27□□□□□ -0.44
MSH5-202ENST00000375740 NCOA6Q14686 2063 aaPredicted RBP12.27□□□□□ -0.44
MSH5-202ENST00000375740 NCKAP5O14513 1909 aa12.27□□□□□ -0.45
MSH5-202ENST00000375740 M0R296 226 aa12.27□□□□□ -0.45
MSH5-202ENST00000375740 DHHO43323 396 aa12.27□□□□□ -0.45
MSH5-202ENST00000375740 OR2F2O95006 317 aa12.27□□□□□ -0.45
MSH5-202ENST00000375740 BPNT1O95861 308 aa12.27□□□□□ -0.45
MSH5-202ENST00000375740 SRD5A2P31213 254 aa12.27□□□□□ -0.45
MSH5-202ENST00000375740 CASRP41180 1078 aa12.27□□□□□ -0.45
MSH5-202ENST00000375740 ZNF133P52736 654 aaPredicted RBP12.27□□□□□ -0.45
MSH5-202ENST00000375740 OR2F1Q13607 317 aa12.27□□□□□ -0.45
MSH5-202ENST00000375740 ZNF260Q3ZCT1 412 aa12.27□□□□□ -0.45
MSH5-202ENST00000375740 OR5AS1Q8N127 324 aa12.27□□□□□ -0.45
MSH5-202ENST00000375740 GALNT16Q8N428 558 aa12.27□□□□□ -0.45
MSH5-202ENST00000375740 CHST4Q8NCG5 386 aa12.27□□□□□ -0.45
MSH5-202ENST00000375740 NABP1Q96AH0 204 aa12.27□□□□□ -0.45
MSH5-202ENST00000375740 SLCO5A1Q9H2Y9 848 aa12.27□□□□□ -0.45
MSH5-202ENST00000375740 UQCC1Q9NVA1 299 aa12.27□□□□□ -0.45
MSH5-202ENST00000375740 PCSK5Q92824 1860 aa12.27□□□□□ -0.45
MSH5-202ENST00000375740 LNP1A1A4G5 178 aa12.26□□□□□ -0.45
MSH5-202ENST00000375740 GJE1A6NN92 205 aa12.26□□□□□ -0.45
MSH5-202ENST00000375740 ITGB2P05107 769 aa12.26□□□□□ -0.45
MSH5-202ENST00000375740 CTSSP25774 331 aa12.26□□□□□ -0.45
MSH5-202ENST00000375740 EIF2S3LQ2VIR3 472 aaKnown RBP12.26□□□□□ -0.45
MSH5-202ENST00000375740 GJC3Q8NFK1 279 aa12.26□□□□□ -0.45
MSH5-202ENST00000375740 OR10R2Q8NGX6 335 aa12.26□□□□□ -0.45
MSH5-202ENST00000375740 AQP3Q92482 292 aa12.26□□□□□ -0.45
MSH5-202ENST00000375740 CNTNAP3BQ96NU0 1288 aa12.26□□□□□ -0.45
MSH5-202ENST00000375740 P4HTMQ9NXG6 502 aa12.26□□□□□ -0.45
MSH5-202ENST00000375740 KLK13Q9UKR3 277 aa12.26□□□□□ -0.45
MSH5-202ENST00000375740 TMEM82A0PJX8 343 aa12.26□□□□□ -0.45
MSH5-202ENST00000375740 OR2AT4A6NND4 320 aa12.26□□□□□ -0.45
MSH5-202ENST00000375740 FGF16O43320 207 aa12.26□□□□□ -0.45
MSH5-202ENST00000375740 F10P00742 488 aa12.26□□□□□ -0.45
MSH5-202ENST00000375740 ERCC1P07992 297 aaPredicted RBP12.26□□□□□ -0.45
MSH5-202ENST00000375740 JMJD7P0C870 316 aa12.26□□□□□ -0.45
MSH5-202ENST00000375740 CCL1P22362 96 aa12.26□□□□□ -0.45
MSH5-202ENST00000375740 FABP9Q0Z7S8 132 aa12.26□□□□□ -0.45
MSH5-202ENST00000375740 SMCO1Q147U7 214 aa12.26□□□□□ -0.45
MSH5-202ENST00000375740 CDNFQ49AH0 187 aa12.26□□□□□ -0.45
MSH5-202ENST00000375740 AWAT2Q6E213 333 aa12.26□□□□□ -0.45
MSH5-202ENST00000375740 FOXL2NBQ6ZUU3 175 aa12.26□□□□□ -0.45
MSH5-202ENST00000375740 DOK3Q7L591 496 aa12.26□□□□□ -0.45
MSH5-202ENST00000375740 OR5AP2Q8NGF4 316 aa12.26□□□□□ -0.45
MSH5-202ENST00000375740 OR5M8Q8NGP6 311 aa12.26□□□□□ -0.45
MSH5-202ENST00000375740 ZNF837Q96EG3 531 aaPredicted RBP12.26□□□□□ -0.45
MSH5-202ENST00000375740 PGAM5Q96HS1 289 aa12.26□□□□□ -0.45
MSH5-202ENST00000375740 ZPBPQ9BS86 351 aa12.26□□□□□ -0.45
MSH5-202ENST00000375740 PAPOLGQ9BWT3 736 aaKnown RBP12.26□□□□□ -0.45
MSH5-202ENST00000375740 SPRY4Q9C004 299 aa12.26□□□□□ -0.45
MSH5-202ENST00000375740 SELENOIQ9C0D9 397 aa12.26□□□□□ -0.45
MSH5-202ENST00000375740 SEBOXQ9HB31 216 aaPredicted RBP12.26□□□□□ -0.45
MSH5-202ENST00000375740 PLEKHA6Q9Y2H5 1048 aa12.26□□□□□ -0.45
MSH5-202ENST00000375740 KIAA1549Q9HCM3 1950 aa12.26□□□□□ -0.45
MSH5-202ENST00000375740 MUC3AQ02505 3323 aa12.26□□□□□ -0.45
MSH5-202ENST00000375740 C9orf172C9J069 976 aa12.25□□□□□ -0.45
MSH5-202ENST00000375740 F5H5K5 113 aa12.25□□□□□ -0.45
MSH5-202ENST00000375740 CYB5AP00167 134 aa12.25□□□□□ -0.45
MSH5-202ENST00000375740 SERPINA7P05543 415 aa12.25□□□□□ -0.45
MSH5-202ENST00000375740 RAC3P60763 192 aa12.25□□□□□ -0.45
MSH5-202ENST00000375740 DHRS2Q13268 280 aa12.25□□□□□ -0.45
MSH5-202ENST00000375740 ZNF345Q14585 488 aa12.25□□□□□ -0.45
MSH5-202ENST00000375740 PEA15Q15121 130 aa12.25□□□□□ -0.45
MSH5-202ENST00000375740 ACOT7LQ6ZUV0 252 aa12.25□□□□□ -0.45
MSH5-202ENST00000375740 PGAP1Q75T13 922 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms